Ixodes scapularis (black-legged tick): 115316096
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Entry
115316096 CDS
T01131
Name
(RefSeq) RNA-binding protein 39 isoform X1
KO
K13091
RNA-binding protein 23/39
Organism
isc
Ixodes scapularis (black-legged tick)
Brite
KEGG Orthology (KO) [BR:
isc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
isc03041
]
115316096
Spliceosome [BR:
isc03041
]
Common components
Common spliceosomal components
General mRNP proteins
115316096
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
RBM39linker
RRM_occluded
RRM_5
RBD_DEAH11
RRM_7
RRM_PARP14_3
RRM_10
Nup35_RRM_2
CDC45
Motif
Other DBs
NCBI-GeneID:
115316096
NCBI-ProteinID:
XP_040062619
LinkDB
All DBs
Position
Unknown
AA seq
531 aa
AA seq
DB search
MWRSGCGPRGVMADDLDVEALLEAPYRKEELNGAASSSIQHGMPSQEGAKGSADKENRHK
KKRSRSRGRSRSRSRGRHRSRSRDKRRSRSRSRERRRKRSRSRSPGRRRGHPPPPPPPPM
HRSRSRSRDRRRRRSMSPRRRYCFPKNSKVSPFDSHPPRGPDDITPEERDMRTVFCMQLS
QRIRARDLEEFFSAVGKVRDVRLIMDNKTRRSKGIAYVEFQDVESVPLAMGLNGQKLFGI
PIVVQPTQAERNRAAAQSASTSSSTLQRGNIGPMRLYVGSLHFNITEDMLKGIFEPFGKI
DKIELIKDMETNRSKGYGFITFHDSEDAKKALEQLNGFELAGRPMKVGHVTERTDVSQAP
SFLDSEELDRSGIDLGATGRLQLMAKLAEGTGFQIPQAAVNALQMNPMGLPGQPQGAVAA
AATAPTIATQCFLLSNMFDPLTETNPSWDEEIRRDVMEECRKHGGALHVYVDQASPEGHV
YVKCPTIASAVASVNALHGRWFAGRIITAAYVPVMSYHTLFPDSATTNALL
NT seq
1596 nt
NT seq
+upstream
nt +downstream
nt
atgtggcggagtggatgcggccccaggggtgtcatggctgacgaccttgatgtggaggcc
ttgctggaggcaccctacagaaaggaggaactgaatggggctgcttcgagttctattcag
catgggatgccctctcaggagggggccaaggggtcggccgacaaggagaacaggcataag
aagaagcggagccggagtcgaggacgaagccgcagccgtagccgcgggcggcaccgcagc
aggagccgggacaagcgccgctcaagatcacgctcgcgggagcgccgacgcaagcgttca
cgctcccgcagccctggtcgtcgtaggggccatccccctccacctcctcccccacccatg
catcgcagcaggagccgaagccgggaccgacgcaggcggcgctccatgtcaccgagaagg
agatattgttttcccaaaaacagcaaggtttcgccgttcgactcgcatccacccaggggc
ccggatgacataaccccagaggagagggacatgcgcacggtgttttgcatgcagctgtct
caacggattcgtgcaagggacttggaggagttcttctcagccgttggcaaggtgcgggat
gtccgcctcatcatggacaacaaaacgcgaaggtcgaaaggcattgcttatgtggaattc
caagatgtagagtccgtgcccttggccatgggcctcaatggccagaaactgtttggcatc
cccatcgtggttcagccgacccaggcagagcgtaatcgggcagctgcccagagtgccagc
accagtagcagcacccttcagcggggcaacattgggccgatgcgcctctacgttggctct
cttcacttcaacatcacagaggacatgctcaaaggcatcttcgaaccatttggcaagatt
gacaagattgagctgataaaggacatggagacgaatcgctccaagggttacggctttatc
acattccacgattccgaggatgccaagaaggccctggagcaactgaacggctttgagctg
gctgggcgtcctatgaaggtggggcatgtgacggaacgcacggacgtgtcccaggcgccc
agcttcctggacagtgaagagcttgaccgcagtggcatcgacctcggggctacgggcagg
ctgcagctgatggccaagctggccgagggtactggcttccagatcccccaggcggcggtg
aatgcgctccagatgaaccccatgggccttccgggccagcctcagggggccgtggcggca
gcagccacggcgcccacgattgccacccagtgtttcctcctgtccaacatgtttgacccc
ctgacggagacaaacccatcgtgggacgaggaaattcgccgagacgtgatggaggaatgc
cgcaagcatggtggggcgctgcacgtctacgtggaccaggcctctccggagggacacgtt
tacgtcaagtgccccaccattgcctcggccgtggcctcggtcaacgcgcttcacggccgc
tggtttgcaggacgcatcatcacagctgcctatgttcctgtcatgagctaccatacattg
ttcccggactctgctacaacaaatgccctcctgtga
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