Ixodes scapularis (black-legged tick): 115320156
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Entry
115320156 CDS
T01131
Name
(RefSeq) general transcription factor IIH subunit 2
KO
K03142
transcription initiation factor TFIIH subunit 2
Organism
isc
Ixodes scapularis (black-legged tick)
Pathway
isc03022
Basal transcription factors
isc03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
isc00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
115320156
09124 Replication and repair
03420 Nucleotide excision repair
115320156
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
isc03021
]
115320156
03400 DNA repair and recombination proteins [BR:
isc03400
]
115320156
Transcription machinery [BR:
isc03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
115320156
DNA repair and recombination proteins [BR:
isc03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
115320156
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ssl1
VWA_2
C1_4
FliG_M
Motif
Other DBs
NCBI-GeneID:
115320156
NCBI-ProteinID:
XP_040066827
LinkDB
All DBs
Position
Unknown
AA seq
395 aa
AA seq
DB search
MADEEDAQGYRWETEYERTWEAIQEDESGLLQPSVLDFVHRSKRKQMLAKKNVRLGMMRH
LYIIVDFSEAMSEPDLKPSRLVCTLKMLELFVEEFFDQNPISNVGVISTSNKRAQKLFDL
VGNASKVVEALRSATNKVPSGEPSLQNSLELAAEVLRHLPTHTSREVLVVMGSLTTCDPS
DIHKTIEAMQKCSIRCSVVGLAAEVRVCCALTKATGGTYNVIMDENHFKEILFQHAIPPP
VTGNSESSLIRMGFPYQRTEGEGKPSICFCHLDSQNTSEGLSKSGFFCPQCSGKYCSLPV
ECKTCGLTLVSAPHLARSYHHLFALDAFEEMPKESLPKDDVVSCFSCLSSIPDNHVYQCT
KCKAQFCLECDLFIHDTLHTCPGCASRPSTLENPS
NT seq
1188 nt
NT seq
+upstream
nt +downstream
nt
atggccgacgaggaggatgctcaaggctaccggtgggagacagaatatgaaagaacttgg
gaagcaattcaggaagatgaatcaggcttacttcagccgagcgtcctggacttcgtccat
cggtccaagcgcaagcagatgctggctaagaagaatgtccgcctggggatgatgcggcat
ctctacatcatagtggacttttccgaagcgatgtcggaaccagacttgaagccttcgaga
cttgtttgcacgctgaagatgctggagctgtttgtggaggagttcttcgaccagaacccc
atcagcaatgtcggtgtcatctcgacgagcaacaagcgggcacagaagctcttcgacctc
gtcggcaatgcttcgaaagtggttgaggctctccggtcggccaccaacaaggtgccgtcg
ggagaaccctccttgcagaactctctggaactggcggcggaggtgctccggcatttaccg
acccacaccagtcgagaggtgcttgtcgtgatgggaagccttaccacctgcgatcctagc
gacatccacaaaacgattgaggcaatgcagaagtgcagcattcgttgcagtgtggttggc
cttgcagctgaagttcgtgtgtgctgtgctctcaccaaagccactggaggcacttacaac
gtaatcatggatgagaatcacttcaaagagattctgtttcagcatgccatcccaccaccc
gtcacgggaaattctgaatcctctctcatcagaatgggatttccctaccaacgaacagag
ggtgaagggaaaccgtccatctgtttttgccacctagacagtcagaacacgtcggaggga
ctgagcaagagcggctttttctgtccccagtgcagcggcaagtactgctccctccctgtg
gagtgcaagacctgcggtctgacgctggtctccgcaccccatcttgcaaggtcatatcat
cacttgtttgcattagatgcatttgaggagatgccgaaggagtcgcttccaaaggatgac
gttgtttcatgtttctcctgcctgtcctccatccctgacaatcatgtctaccagtgtacg
aagtgcaaggcacagttctgtctggagtgtgatcttttcattcatgacactctacacaca
tgcccaggatgtgcgagtcgaccctccacgctcgaaaacccgtcttga
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integrated database retrieval system
