Ixodes scapularis (black-legged tick): 115322097 Help Entry 115322097         CDS       T01131                                  Name (RefSeq) pre-mRNA-processing factor 19   KO K10599   pre-mRNA-processing factor 19 [EC:2.3.2.27] Organism isc  Ixodes scapularis (black-legged tick) Pathway isc03040   Spliceosome isc04120   Ubiquitin mediated proteolysis Brite KEGG Orthology (KO) [BR:isc00001]  09120 Genetic Information Processing   09121 Transcription    03040 Spliceosome     115322097   09123 Folding, sorting and degradation    04120 Ubiquitin mediated proteolysis     115322097  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03041 Spliceosome [BR:isc03041]     115322097    04121 Ubiquitin system [BR:isc04121]     115322097    03400 DNA repair and recombination proteins [BR:isc03400]     115322097 Enzymes [BR:isc01000]  2. Transferases   2.3  Acyltransferases    2.3.2  Aminoacyltransferases     2.3.2.27  RING-type E3 ubiquitin transferase      115322097 Spliceosome [BR:isc03041]  Complex B   Other components    Prp19 complex     115322097  Complex C    Prp19-CDC5 complex     115322097 Ubiquitin system [BR:isc04121]  Ubiquitin ligases (E3)   U-box type E3    115322097 DNA repair and recombination proteins [BR:isc03400]  Eukaryotic type   Other factors with a suspected DNA repair function    PSO4 complex     115322097 BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  WD40_Prp19 Beta-prop_WDR5 Beta-prop_THOC3 Beta-prop_WDR3_1st WD40 WDR55 WD40_WDHD1_1st Prp19 Beta-prop_WDR36-Utp21_2nd WD40_Gbeta Beta-prop_EML_2 WD40_CDC20-Fz Beta-prop_WDR3_2nd WD40_MABP1-WDR62_2nd Beta-prop_CAF1B_HIR1 EIF3I Beta-prop_TEP1_2nd Beta-prop_WDR90_POC16_2nd Beta-prop_EML Beta-prop_WDR36-Utp21_1st Beta-prop_WDR75_1st Beta-prop_TEP1_C WD40_MABP1-WDR62_1st ANAPC4_WD40 Beta-prop_IFT140_1st Beta-prop_Aladin U-box Beta-prop_SCAP Beta-prop_HPS5 NBCH_WD40 Beta-prop_WDR19_1st Beta-prop_WDR41 Beta-prop_Vps41 WDR90_beta-prop_4th Beta-prop_EIPR1 Beta-prop_VPS8 Beta-prop_RIG_2nd Beta-prop_DCAF4 Beta-prop_DCAF12 PEP5_VPS11_N Cytochrom_D1 ATG16 zf-Nse PAS_11 Motif Other DBs NCBI-GeneID:  115322097 NCBI-ProteinID:  XP_029838283 LinkDB All DBs Position Unknown AA seq 493 aa AA seqDB search MSLCCALSNEAPEQPVVSPVSGAVFERRLVVKYLKEHGTDPVNNQPLTEDMLIELKVAPL AKPRPPSATSIPALLKALQDEWDAVMLHSFSLRQQLQTARQELSHTLYQHDAACRVIARL TKEVTAAREALATLKPQAAGGGPQAEAAAAPAEAAEETAGGMTAEVVRRLQEKATLLTAQ RKKRGKAIPEDLAKPEELRAFRALGSHPGLHSAGLPGILALDVSPSDRVLTGGSDRNAAV FNKDTEQVVAVLKGHTKKVTSVVFHPDEDTAITASPDATVRVWHVPSAQTTQVIRAHEGP VTGLSLHATGDYLLSTSTDQHWAFSDLRTGRVLARVGDTCALTAAEFHPDGLILGTGTSD ALVKIWDLKERTNVANFPGHTGPISALAFSENGYYLATAAGDAAVKLWDLRKLKNFRTLT LDEGYEVRDLFFDQSGTYLAVAGTDVRLYLCKQWDTLKVFADHTALATGVRFTHRARNVA SVSMDRTLKIYGL NT seq 1482 nt NT seq  +upstreamnt  +downstreamnt atgtcgctgtgctgcgccctgagcaacgaggcgcccgaacaaccggtggtttcaccggtc tcgggcgccgtcttcgaacgccgcctcgtggtcaagtacctgaaggagcatggcacggac ccggtcaacaaccagcctctcacggaagacatgctcattgagctcaaggtggccccactg gccaagccccgtcccccgtcggccaccagcattcccgccctgctcaaggcacttcaggac gagtgggacgcagtgatgctgcacagcttctcgctgcggcagcagctgcagacggctcgg caagagctgtcccacacgctgtaccagcacgacgcggcctgccgcgtcatcgcccgtctc accaaggaggtgacggcggccagagaggccctggctaccctcaagccccaggcagcaggg ggagggcctcaggcggaggcagcggcagcacccgcggaggcggccgaggagactgccggc ggcatgacggccgaagtagtgcggcgcctgcaggagaaggccacccttctcacggcacag cgcaagaagagaggcaaggccatcccggaggatcttgccaagccggaggagctgcgtgcc ttccgtgccctggggtcgcaccccggcctgcacagtgcaggcctgccgggcatcctagcc ctggacgtgagccccagcgaccgggtgctcactgggggcagcgatcgcaacgcggccgtc ttcaacaaagacacagagcaggtcgtggctgtgctcaaggggcacaccaagaaggtcacc tcggtggtgttccacccggacgaagacacggcgatcacggcttccccggacgcgacggtg cgtgtgtggcacgtgccgagcgcccagacgacgcaggtgatcagagcccacgagggcccc gtgacggggctgagcctgcacgccacgggggactacctgctgtccacctcgacggaccag cactgggccttctcggacctacgcacggggagggtgctggcccgggtgggggacacctgc gccctcacagcggccgaattccacccggacggcctcatcttaggaacggggacctcggac gccctcgtcaagatctgggacctcaaggagcgcaccaacgttgcaaacttcccggggcac acggggccgatctcggcgctggccttctcggagaacggctactacctggccacagcggca ggggacgcggcggtgaagctctgggacctgcgcaagctgaagaacttccgcaccctgacg ctggacgagggctacgaggtgcgggacttgtttttcgaccagagcggcacctacctggct gtggccggcacggacgtgcgcctctacctgtgcaagcagtgggacaccctcaaggtgttt gccgaccacacagccctggccacgggcgtgcgtttcacccaccgggcgcgcaatgtggcc tcggtcagcatggaccgcaccctcaagatatatggcctctag

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