Ixodes scapularis (black-legged tick): 115324969
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Entry
115324969 CDS
T01131
Name
(RefSeq) ATP-dependent RNA helicase DHX8
KO
K12818
ATP-dependent RNA helicase DHX8/PRP22 [EC:
5.6.2.6
]
Organism
isc
Ixodes scapularis (black-legged tick)
Pathway
isc03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
isc00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
115324969
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
isc03041
]
115324969
Enzymes [BR:
isc01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
115324969
Spliceosome [BR:
isc03041
]
Complex C
Other components
Step II factors
115324969
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
OB_NTP_bind
HA2_C
S1
Helicase_C
WHD_HA2
GIPC1_GH2
AAA_22
DEAD
AAA_19
nSTAND3
Cas3-like_C_2
T2SSE
Flavi_DEAD
AAA_30
Sigma54_activ_2
PhoH
nSTAND_NTPase5
AAA_16
Motif
Other DBs
NCBI-GeneID:
115324969
NCBI-ProteinID:
XP_040074581
LinkDB
All DBs
Position
Unknown
AA seq
1198 aa
AA seq
DB search
MDEIAKLEYLSLVSKICTELDNHLGINDKDMAEFIIDLADKNNTFESFKKALEENEAEFS
DSFTANLLRIIQHMRPKKHTSSLPKEGFEEKPRTELDIKRERFPFLALPNDPKARTLLEE
DVKVASDALAELEALAPGARKKDAEVDKSSSRTERSNDKHSRSSRRHRSKSRSRSPVHRS
SRRRSRSRTKSPYSRRYSSRRSRSRSRDRDRRRSRSKDRHQASGSGSSSSHKDRNAPPVS
PDPVVGQIYNGKVTNIMQFGCFVQLEGLPRRWEGLVHISQLRREGRITNVGDVVARGQRV
KVKVLSFTGQKTSLSMKDVDQDTGEDLNPVRRAGDPESQEAARNPDRPCSLPLVARPDDD
DVDNRRRVQRISSPEKWEIKQMLSANCIDKSELPDFDESTGILPKEDDDEEDLEIELVEE
EPPFLRGHGRSNLQDLSPVRIVKNPDGSLAQAAMMQSALAKERREQKQQQREAEMDSIPA
GLNKHWIDPMPDADGRTLAANMRGIGMMTQELPEWKKHVTGGAKASYGKKTQMTILEQRQ
SLPIYKLKDELVKAVTDNQILIVIGETGSGKTTQITQYLAEAGFTTRGKIGCTQPRRVAA
MSVAKRVAEEFGCRLGQEVGYTIRFEDCTSPETLIKYMTDGMLLRECLIDLDLLSYSIIM
LDEAHERTIHTDVLFGLLKNAVKKRPQLKLIVTSATLDAVKFSQYFFEAPIFTIPGRTFP
VEILYTKEPETDYLDASLITVMQIHLTEPPGDILLFLTGQEEIDTACEILYERMKSLGPD
VPELIILPVYSALPSEMQTRIFEPATPGSRKVVIATNIAETSLTIDGIYYVVDPGFVKQN
VYNPKTGMDSLVVTPISQAQAKQRAGRAGRTGPGKTYRLYTERAYRDEMLTTPVPEIQRT
NLASTVLQLKAMGINDLLSFDFMDAPPTETLIMALEQLHSLSALDNEGLLTRLGRRMAEF
PLSPNLAKMLIMSVHLGCSEEILTVVSMLSVQNVFYRPKDKQALADQKKAKFNQLEGDHL
TLLSVYNSWKNNKFSNAWCYENFVQIRTLKRAQDVRKQLLGIMDRHKLDVVSCAKNTARV
QKAVCSGFFRNAAKKDPQEGYRTLVDGQVVYIHPSSALFNRQPEWVVYYELVLTTKEYMR
EVTTIDPKWLVEFAASFFKFADPTKLSKHKKQLRLEPLYNKYEEPNAWRISRVRRRRN
NT seq
3597 nt
NT seq
+upstream
nt +downstream
nt
atggacgaaatcgccaagcttgagtacctgtctcttgtttccaaaatatgcacggagttg
gacaaccatctaggaataaacgacaaagacatggccgagtttattattgacctggcagac
aagaacaacacgtttgagtccttcaagaaggctctggaagagaacgaggcggagttttcg
gactcgttcacggcaaatctgctgcgtatcattcagcacatgagacccaagaaacataca
agctctctacccaaagaaggctttgaagaaaagcccaggacagagctggacatcaagcgc
gagcgtttcccatttctagcgctaccgaatgacccaaaagcacggacattactagaagag
gatgtgaaagttgcgtcggatgccctcgcagaactagaagctctagcaccgggtgccagg
aaaaaagacgcagaagtggacaagtcaagcagcaggactgaacgatcaaatgacaagcat
agcaggtcctccaggcgtcatagatcaaagtctcgttcaaggagccccgtccaccggtct
tcgaggcgtcgctccaggtctcgaaccaagagtccctactcgcggcgctactccagtcgc
cggtcccgcagtcgtagtcgcgaccgggaccgccgccgatctcgctccaaggatcggcac
caggcctctggtagtggaagcagcagcagccacaaggaccgcaacgcgcctcccgtgtct
cctgaccccgtggttggacagatctacaacgggaaggtgaccaacattatgcagtttggc
tgtttcgttcagctggaaggtctacccagacgttgggaaggcctagttcatatctctcag
ttgcggagggagggccgcatcaccaacgtcggagacgtagttgccagaggccagcgcgtc
aaggtgaaggtcctgtcattcacgggacagaagaccagcctttccatgaaggacgtcgac
caagacacgggggaagacctgaaccccgtccggcgtgcgggagacccggagtctcaggag
gcggcccgcaatcccgaccgcccttgctccctgccgctggtggcacgccccgacgacgac
gacgtggacaaccggcggcgggtccagaggatctcctctcccgagaagtgggaaatcaag
cagatgctttctgcgaattgcattgacaagtcggagcttccagactttgatgagtcaacc
ggtatactacccaaagaagatgacgatgaggaagatctagaaattgaactggttgaggaa
gaaccgccattcctgagaggccatggaagatccaacttgcaagacctgagtccggtcagg
atagtgaagaatcctgacggctcccttgcacaagcagccatgatgcagtctgccctagca
aaagaacgtagggagcagaagcagcagcaaagagaagcagagatggattcgattccagct
ggcctgaacaagcactggattgaccccatgcctgatgcggacggccgcaccctggccgcc
aacatgcgcggcatcgggatgatgacccaggagttgcccgagtggaagaaacacgtgacg
ggaggggccaaggcatcttatggcaagaagacccagatgaccatcctggaacagaggcag
tctctacccatctacaagctgaaggacgaattggtcaaggctgtgacggacaaccagatt
ctgatcgtgattggagaaaccgggtccggcaagaccacacagatcacccagtacctcgcc
gaggctggcttcaccacccggggcaagattggctgcacccagcccagacgtgtggcggcc
atgtcggtggccaagagggtcgccgaggagtttggctgccggctcggacaggaggttggc
tatacaatccgtttcgaagactgcacaagcccggagacgctcatcaagtacatgacagac
ggcatgttgctgcgagagtgcctgattgacctggacctgctgtcctactccatcatcatg
ctggacgaagcccacgagaggaccatacacacggacgtccttttcggtctcctcaaaaat
gcggtgaagaagcgcccacagctgaagctgattgtgacgtcggccacattggatgcggtc
aagttttcccaatacttcttcgaggcgcccatcttcacaataccgggaaggactttccca
gttgagattctctacacaaaggaacctgagactgactacctggacgcttcgctcatcacc
gtgatgcagatccatcttaccgagcctccaggcgacatcttgctgttcctgaccggtcaa
gaggaaatcgacaccgcctgcgagattctctacgaacggatgaaatccctcgggccggac
gtgcccgagctgatcattcttcctgtctactcggcactgcccagcgagatgcagacgagg
atcttcgaacctgccacgccgggttccagaaaggttgtgattgctaccaacattgccgaa
acatccctgaccattgatggaatctattatgtcgtcgatccgggctttgtgaagcagaat
gtgtacaaccccaagaccggaatggattccctggtcgtcaccccgatctcacaggcccag
gccaagcagagggcggggcgtgccggtcgcacggggccgggcaagacgtaccggctctac
acggagcgtgcgtaccgggatgaaatgctcaccaccccagtgcccgagatccagcgcacc
aacctggcctccacggtgctccagctcaaggccatgggcatcaacgacctgctctccttc
gacttcatggacgcgccccccacagagaccctgattatggccctggaacagcttcattcc
ctaagtgctctggacaacgagggactgctgactcgacttgggaggaggatggccgagttt
cccctgagtcccaacttggccaaaatgctcatcatgtcggtgcacctgggatgcagcgag
gagatcctgactgtggtctccatgctgtcagtgcagaacgtcttctacaggcccaaggac
aagcaagccctggccgaccagaaaaaagccaagttcaaccagctcgagggcgaccacctg
accctgctctcggtgtacaactcctggaagaacaataagttctccaatgcctggtgctat
gagaactttgtccagatacgcacgctcaagagggcccaggacgtcaggaaacagctgctc
gggatcatggacaggcacaagctggacgtggtgtcatgcgccaagaacacggctcgcgtg
cagaaagccgtgtgcagcggcttctttagaaacgcagccaagaaggacccccaagagggc
taccgcaccctggtggacggccaggtggtctacatacacccttccagtgccctcttcaac
cgccagccagaatgggtggtctattacgagctggtcctgacaaccaaggagtacatgcgg
gaggtgaccaccatcgaccccaagtggctggtggagtttgcggcgtccttcttcaagttt
gccgaccccaccaagctgagcaagcacaagaagcagctccggctagagcccttgtataac
aaatacgaagagcccaacgcctggcgaatctcgcgtgtccgcaggcgcaggaactga
DBGET
integrated database retrieval system
