Ixodes scapularis (black-legged tick): 115327842
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Entry
115327842 CDS
T01131
Name
(RefSeq) transient-receptor-potential-like protein
KO
K04967
transient receptor potential cation channel subfamily C member 4
Organism
isc
Ixodes scapularis (black-legged tick)
Brite
KEGG Orthology (KO) [BR:
isc00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
isc04040
]
115327842
Ion channels [BR:
isc04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
115327842
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TRP_2
Ion_trans
Ank_2
Ank
Ank_3
Ank_4
PKD_channel
Ank_5
DUF8104
CCDC90-like
Trigger_C
YVC1_C
GlutR_dimer
Motif
Other DBs
NCBI-GeneID:
115327842
NCBI-ProteinID:
XP_042145864
LinkDB
All DBs
Position
Unknown
AA seq
957 aa
AA seq
DB search
MRSAMGASPQPGPQTTVRQSPQSPNCFRIPIPLEPLKDGPSMDPKERIFLEAAERGDRHT
MIRCLSPPQPVNVNCTNILGRSAIQIAVDNENVEIVELLLRQEDVQIGDALLQAIREGVY
KIVEMLIDHPSITAEMLASGWARSLSKESSDYSADISPVILAAHCNQFEILQLLLSRGAT
IDRPHPLSCGCRRCYEDTRRDSLRHSLRRIHAFRALASPAWISLTSEDPIFTAFKLSWEL
GTLAQRENEFKEIYLELSNQCKKYSCELLDLCRSSEEVVAVLNKRSGPDQIEDSDDDTDD
ELEYDAGQDYCPDQANPGPYHHSGGLTLSRLKMALKYDQKQFVAHPNCQQLLTSIWYQGL
PVWRRRNALSKICLCAGLIALLPLIACYYLAFPRSRLSRVVRSPFMKFIYHSASFGCFLL
LLILASTRTDRSRQNIRGPAPSPVEWLILFWVTGMVWAECKQLWEEGLKAYVRQWWNWLD
FIMLSLYLTTGSLRAVAYFQVQSGQYGAKVLERVQWPSNDPTLIAEGVFAMANVFSFARI
IYLFQTNPHLGPLQISLGCMIIDIAKFLFIFFLVLTSFVCGLNQLYWYYDPSMGFCETKE
VGGVNITFNCHHNPDAFLTIDASYTSLLWSLFGVIPIKDISARKDQPFTKWVGHALLGAY
MIMAMTVMINMLIAMMSRSFQDIEDHKDREWKFARSKLWMGYFDEGSTLPPPFNLVISPK
SVWYFLRCLLRLCRFLCKKTFFRRPRFDHSSVKPEAQDPMYVGNVPGKVSQKKAATGAAT
VSLRFNGQASTAQYQEVMKRLVNRYIHRAKKQLRQDGVNEDDLLEIKQDISSLRFELRED
RKREAALSVRQLDTLRRDIFKGGPLQSTLEVPGPPLPMQQPPPSLSPYYGLLSPEEVDQM
RLQIVNSVREELRHLARELHVQHCHRPPYQAPPVPPASRPAPPLPPDLYQTHLFTQL
NT seq
2874 nt
NT seq
+upstream
nt +downstream
nt
atgaggtccgcgatgggcgcgtcccctcaaccggggccgcagacgaccgtgcggcagtcc
ccgcagtctcccaactgcttccgcatcccgataccgctggaacctctcaaggacgggccc
tccatggaccccaaggagcgcatcttcctggaggccgcggagcggggcgaccgccacacc
atgatccgatgcctgtcgccgccccagcccgtgaacgtgaactgcactaacatcctgggc
cggagcgccatccagatcgccgtcgacaacgagaatgtcgagatcgtcgagcttttgctg
cgccaggaggacgtccagatcggggacgccctcctccaggccatacgagaaggcgtgtac
aagatcgtggagatgctcatcgaccacccgagcatcacggccgagatgctggccagcggc
tgggcgcgcagcctgtccaaggagagctcggactactcggcagacatctctcccgtcatc
ctggccgcccactgcaaccagttcgagatcctgcagctcctgctctcgcgcggcgccacc
atcgaccggccacacccgctgtcgtgcggctgccgccgctgctacgaggacacccgcagg
gactccctgcggcactcgctgcgcagaattcacgcgttcagggccctcgccagccccgcc
tggatatcgctcaccagcgaggaccccatcttcaccgccttcaagctgtcctgggagctg
ggcaccctcgcccagcgcgaaaacgagttcaaagagatctacctggaactcagcaaccag
tgcaagaagtactcctgcgagctgctggacctgtgccgcagcagcgaggaggtcgtcgcc
gtcctcaacaaacgttctggcccggaccagattgaggactcggacgacgacaccgacgac
gagctcgagtacgacgccggccaggactactgccccgaccaggccaacccgggaccgtac
caccactcgggaggcctcaccctctcccggctcaagatggctctcaaatacgaccagaag
cagttcgtggcacaccccaactgccagcagctcttaacgtccatctggtaccagggccta
ccggtgtggcgacgtcgtaacgccctcagcaagatctgtctctgcgctggtctcatcgcc
ctgctgccgctcatcgcctgctactacctcgcctttccgaggtcgcgtctgagtcgtgtg
gtccgttcgcccttcatgaagttcatctaccacagcgcgtcgttcggatgctttttgctt
ctgctcatcctcgcgtccaccaggacggaccgctccagacaaaacatccgcggtcccgcc
ccgtcacccgtcgagtggctcatcctcttctgggtcacggggatggtgtgggccgagtgc
aagcagctatgggaagagggactcaaggcgtacgttcgccagtggtggaactggctggac
tttatcatgctgtcgttgtacctgaccactgggtccctccgggccgtcgcctacttccag
gtgcagagcggccagtacggggccaaggttctggagagggtccagtggccgtctaacgac
ccgacgctgatcgcggaaggggtgttcgcgatggccaacgtgtttagttttgcgaggatc
atctacctgtttcagacgaacccgcacctgggtccactgcagatatcgctgggctgcatg
atcatcgacatcgccaagtttctcttcatcttctttctggtgctcacgtcatttgtgtgc
ggtctgaaccagctgtactggtactacgacccgagcatgggcttctgcgagaccaaggag
gtcgggggtgtgaacattactttcaattgccaccacaatccagacgcctttctaacgata
gacgccagttacacgtccttactatggtctctattcggagtcatccccatcaaggacatc
agcgctcgaaaggaccagcccttcacgaagtgggtgggacacgccctactcggcgcctac
atgatcatggccatgacggtcatgatcaacatgctcatcgccatgatgagcaggtccttc
caggacatcgaggatcacaaggaccgtgagtggaagttcgcccggtccaagctgtggatg
ggctacttcgacgaaggatccacgctgccgccgcccttcaacctggtcatcagccccaag
tcggtctggtacttcctgcgctgtctcctccgcctctgccgcttcctctgcaagaagacc
ttcttccggaggccgcgcttcgatcactcctccgtcaagcccgaggcacaagaccccatg
tatgttggaaatgttcctggaaaagtcagccagaaaaaagctgccactggagctgccaca
gtctcgctcaggttcaatggacaagccagtactgctcagtatcaggaggtgatgaagcgg
ttagttaatcgctacattcaccgtgctaagaagcagcttcgtcaagacggcgtcaacgag
gatgaccttctagaaatcaaacaggatatttccagtctcaggttcgaactccgcgaggat
cgaaaacgcgaagcggcgctcagcgttcgtcaactggacacgttgcgccgagacatcttc
aagggcgggcccttgcaatccacgctcgaggtgccagggccacccctgccgatgcagcaa
ccgccacccagtctgtcgccctactacggcctcctctcgcccgaagaagtggaccagatg
cggcttcagattgtcaacagcgtccgcgaggaactgcgtcacctggcccgggaactgcac
gtccagcactgccatcggccgccgtaccaggcaccgccggtgcctcctgcttcgaggccg
gcacctccgcttcctcctgacttgtatcagacacacctcttcacacagttatga
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