Ixodes scapularis (black-legged tick): 120841875
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Entry
120841875 CDS
T01131
Name
(RefSeq) sister chromatid cohesion protein PDS5 homolog B
KO
K11267
sister chromatid cohesion protein PDS5
Organism
isc
Ixodes scapularis (black-legged tick)
Brite
KEGG Orthology (KO) [BR:
isc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
isc03036
]
120841875
03400 DNA repair and recombination proteins [BR:
isc03400
]
120841875
Chromosome and associated proteins [BR:
isc03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Other sister chromatid cohesion factors
120841875
DNA repair and recombination proteins [BR:
isc03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Shu complex and associated proteins
120841875
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PDS5
Cnd1
Motif
Other DBs
NCBI-GeneID:
120841875
NCBI-ProteinID:
XP_040068806
LinkDB
All DBs
Position
Unknown
AA seq
1363 aa
AA seq
DB search
MPKAAGPQNPPKVLYPPGVKEISDDLSTDDLVRRLKECAQTFQNLSQDDDNSAYVHLALH
LAGDGFLEHSSKDVRLLVACCIADVFRVFAPEAPYKDPDQLKTIFLFFIEQLRGLEDPKD
PTFKRYFYLLENLAWVKSFNICIELEENQTIFCHLFSLIFTIVNDNHSSKVKNFMLDMMC
PLITEADTVSQGLLDIILKQIIEPRKTQNKNAYNLAKDVLKRTLTTIEPYIQSFFNNALV
LGRTSNSSVAHVLYELIYELNILCPSMLTAVLPQLEFKLKCSDEKERLSVTKLLARMFSD
KNSDLAAQNPLLWNCFLGRFNDISVQVRMRCVQYSMHFLLNHPKLRDDITESLRQRQHDP
EETVRYEVVMAIISAAKKDFTAITEELLNFVKERTLDKKFKIRKEALLGLALLYKQHMSS
VELPQSTLECIAWIKNKVLHVYYQTALDDRLLVERILHTCLVPYQLPIEERMHKLYQLFA
TVDDHAVKAFNELLKCQCSVRNQMKSVVEALLLPAGEEKERQLLTRVAILSRNLPDSVKA
QEYLMKLCSILEGNQRLRIHMNNILQGGASCVEAERSVKEVLKSLGYPVQTNSFYVIIKQ
MLERVAPVMVDHAGVKQILSYVRDSLLGQGDIDVQIGVTSSAVRGLQLLHVLSSAFPAAF
VGEDVYNQLLSFLGSDDPVAAELTLQIFSFVGAEIDQRCPNVAQRLLPVVQNFVENGSVK
QAKFAVACLNVIVSNKERVFGQVIDHLKQHFTLESQYFRTALVSMGHISLLCPDLFGGQI
KSIVSKVVVKDLLMMDREEPRLSDTPWCEFEALPEETKVKVEGMKLMVRWLVGLKTASSS
ASSTLRLLVTVITHRGDLMEKEHVSSMEKAWLRYAAAACMLKICCCPTYADVLSHEQFQK
LALVMQDECAEVREKFGCKLHKHLLAMRLPLQFMAMFALAGVEKKRPLRAQLKQWLQSCI
NKRRDFLKQHTISNRKLFTVHPDFVLPYTIHLLAHDPCLTKYDDVPALVQVKECLWFLME
PLITKNEGYSFSFFKRLIENIKQTRDNQCPEDKAAQLKLYAVCDLALGLVMTKTTSFLLK
DFPQEPVLPSKWYTLQDKVQLPNLKTYLPPELAFTAPKNTGADAGAPGSARRGAKGGPAA
RRGLLQRGGRARHEGVVLVDTSLEPSPEVGLQEETVEGEEEDEEEVVDDVVTLSPHDSLQ
SPESEPAKESTTPTPTVVSLRALRPTRRDRAAAEATTQEAATAQSQGGLEPPDKRPRLEE
VAGVPQGPGAQLVCLDSGGAEVDQEGASTAMVVEGSTSAEASQAAQPRRPLRSAKLSNGT
ENTSPNGNPDPVQGAAATRRTAAAATPEPGQDTAPTKKTRRKQ
NT seq
4092 nt
NT seq
+upstream
nt +downstream
nt
atgccgaaggcggcggggccccagaacccccccaaggtgctctacccgcctggggtcaag
gagatctcggacgacctgagcacggacgacctcgtccgacgcctcaaggagtgtgcccag
acgttccagaacctgagccaggacgacgacaacagcgcctacgtgcacctggccctgcac
ctggccggggacggcttcctggagcacagcagcaaggacgtccgcctgctggtggcctgc
tgcatcgccgacgtcttccgggtcttcgcccccgaggccccctacaaggaccccgaccag
ctcaagacaatcttcctgttcttcattgagcagctgcggggtttggaagaccccaaggac
cccacattcaagcggtacttttatctgctcgagaacctggcatgggtgaagtcgttcaac
atctgcatcgagctggaggagaaccagaccatcttctgccacctcttctcgctcatcttc
accatcgtcaacgacaaccactcgagcaaggtgaagaacttcatgctggacatgatgtgc
ccgctgatcacggaggccgacacggtctcccagggactactggacatcatcctcaagcag
atcatcgaaccccgcaagacgcagaacaagaacgcctacaacctggctaaggacgtcctc
aagcggaccctgaccaccatcgagccttacatccagtcgttcttcaacaacgccctggtg
ctgggccggacgtccaacagcagcgtggcccacgtgctctatgagctgatctacgagctg
aacatcctctgccccagcatgctgaccgccgtgctgccacagctcgagttcaagctcaag
tgcagtgacgagaaggagcggctgagcgtgacgaagctcctggcgcgtatgttctccgac
aagaactccgatttggctgcccagaaccccctgctctggaactgcttcctgggacggttc
aacgacatcagcgtgcaggtgcgcatgcgctgcgtgcagtactcgatgcacttcttgctg
aaccaccccaagttgcgggacgacatcacggagtctctgcggcagcggcagcacgacccg
gaggagacggtgaggtacgaggtggtgatggccatcatcagcgctgccaagaaggacttc
accgccatcacggaggagctgctcaacttcgtcaaggagaggaccctcgacaagaagttc
aagatccgcaaggaggctctgctggggctggccctgctgtacaagcagcacatgagcagc
gtggagctgccccagtccaccctggagtgcatcgcctggatcaagaacaaggtgctccac
gtctactaccagaccgccctggacgacaggctcctggtggaacgtatcttgcacacctgc
ctggtgccctaccagctgcccatcgaggagcgcatgcacaagctgtaccagctgtttgct
accgtggacgaccatgccgtcaaggcgttcaacgagctcctcaagtgccagtgctcggtg
cgcaaccagatgaagagcgtggtggaggcgctcctgctgccggccggggaggaaaaggaa
cgccagctgctcaccagggtggccatactctcccgtaacctgccggactccgtgaaggcc
caggagtacctcatgaagctctgcagcatcttggagggcaaccagcgactgcgcatccac
atgaacaacatactgcagggaggggcctcatgcgtggaagcggagcgcagcgtgaaggag
gtgctgaagagcctgggctaccccgtgcagaccaacagcttctacgtgatcatcaagcag
atgctggagcgggtggcgcccgtgatggtggaccacgcgggggtcaagcagatcctctcc
tacgtgcgggactccctgctgggtcagggggacattgacgtccagatcggggtcaccagc
tcggcggtcaggggcctccagctgctgcacgtgctgtcgtctgcgttcccggcggccttt
gtcggggaggatgtgtacaaccagctgctgtccttcctgggctcggacgaccccgtggcg
gcggagctcaccctgcagatcttcagcttcgtcggggcggagatcgaccagcgctgcccc
aacgtcgcccagcggcttcttcccgtggtgcagaacttcgtggagaacgggtcggtcaag
caggccaagttcgccgtggcctgcctaaacgtcatcgtgagcaacaaggagcgcgtcttc
ggacaagtcatagaccacctgaagcagcacttcaccctggagagccagtacttccgcacg
gccctggtgtccatgggccacatctcgctgctctgcccggacctgtttgggggccagatc
aagagcatcgtgtccaaggtggtcgtcaaggacctgctcatgatggaccgggaggagcct
cggctctcggacacgccctggtgcgagtttgaggctctgcccgaggagacgaaggtgaag
gtggagggcatgaagctgatggtgcgctggctggtggggctcaagacggcctcctcctcg
gccagctccaccctgcgcctgctggtcaccgtcatcacccacaggggcgacctgatggag
aaggaacatgtttcgtccatggaaaaggcgtggctgcgttatgcggcggcggcttgcatg
ctcaaaatatgctgctgtccaacatacgccgacgtgctctctcacgagcagttccagaag
ctggccctggtcatgcaggacgagtgtgcggaggtgcgggagaagtttggctgcaagctg
cacaagcacctgctggccatgcggctgcccctgcagttcatggccatgtttgccctggcc
ggggtggagaagaagcggcccctgcgggcacagctcaagcagtggctccagtcctgcatc
aacaagcgacgggacttcctcaagcagcacaccatcagcaaccggaagctgttcacggtc
catccggactttgtgctcccctacacgatccacctactggcgcacgacccctgcctgacc
aagtatgacgacgtgccggcactcgtccaagtcaaggagtgcctgtggttcctgatggag
ccgctcatcaccaagaacgagggctacagcttcagcttcttcaagcgactcatcgagaac
atcaagcagacgagggacaaccagtgtcccgaagacaaggcggcgcagctgaaactgtat
gcggtgtgcgacctggccctggggctggtcatgaccaagacgacgagcttcctgctcaag
gactttccccaggagcccgtgctgccttccaagtggtacaccctgcaggacaaggtgcag
ctgcccaacctgaagacctaccttccccccgagctggccttcacggcgccaaagaacacg
ggagcagacgctggtgcgcccgggtcggctcgccgcggcgccaagggcggccccgccgcg
cgtcggggactcctccagcgtggcggcagggccaggcacgagggggtggtgctggtggac
acctccctggagccctcccccgaggtgggcctgcaggaggagacggtcgagggcgaggaa
gaggacgaggaggaggtggtggacgacgtggtgaccctctccccgcacgactccctgcag
agcccggagtccgagccggccaaggagtcgacgaccccgaccccgacggtggtgagcctg
cgtgccctgcgccccaccaggagggaccgggcggcggcggaggccaccacccaggaggcg
gccactgcccaatcccagggaggcctggagcccccggacaagcggcccaggttggaggag
gtcgcaggggttccccaaggtccaggagcacaactggtttgcctcgacagcgggggtgcg
gaggtggaccaggagggcgcatccacggcgatggttgtcgagggctcaacgtccgccgag
gcgtcacaggcagcacagccccggagacccctccggtcggctaagctctccaacggcacg
gagaacacgagccccaacggcaacccggacccggtgcagggcgccgccgccacccgccgg
acggcggccgccgctaccccggagcccggccaggacactgccccgaccaagaagacgcgg
cggaaacagtga
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