Ixodes scapularis (black-legged tick): 120850507 Help Entry 120850507         CDS       T01131                                  Name (RefSeq) spliceosome RNA helicase DDX39B   KO K12812   ATP-dependent RNA helicase UAP56/SUB2 [EC:5.6.2.7] Organism isc  Ixodes scapularis (black-legged tick) Pathway isc03013   Nucleocytoplasmic transport isc03015   mRNA surveillance pathway isc03040   Spliceosome Brite KEGG Orthology (KO) [BR:isc00001]  09120 Genetic Information Processing   09121 Transcription    03040 Spliceosome     120850507   09122 Translation    03013 Nucleocytoplasmic transport     120850507    03015 mRNA surveillance pathway     120850507  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03019 Messenger RNA biogenesis [BR:isc03019]     120850507    03041 Spliceosome [BR:isc03041]     120850507 Enzymes [BR:isc01000]  5. Isomerases   5.6  Isomerases altering macromolecular conformation    5.6.2  Enzymes altering nucleic acid conformation     5.6.2.7  DEAD-box RNA helicase      120850507 Messenger RNA biogenesis [BR:isc03019]  Eukaryotic type   mRNA surveillance and transport factors    Transport factors     EJC complex      120850507 Spliceosome [BR:isc03041]  Complex C   Other components    EJC/TREX     120850507  Other splicing related proteins   Spliceosome associated proteins (SAPs)    TREX complex     120850507 BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  DEAD Helicase_C ResIII Cas3-like_C_2 Motif Other DBs NCBI-GeneID:  120850507 NCBI-ProteinID:  XP_040078947 LinkDB All DBs Position Unknown AA seq 421 aa AA seqDB search MADNDLLDYEDEEEQEQTAGEPIPEVKKPTGGYVSIHSSGFRDFLLKPELLRAIVDCGFE HPSEVQHECIPQAILGMDILCQAKSGMGKTAVFVLATLQQLDPVDGQVSVLVMCHTRELA FQISKEYERFSKYLPSVRVGVFFGGMNISNDEKLLKSSCPHVVVATPGRALALVRSRKLQ LKHIKHFVLDECDKMLEQLDMRRDVQEIFRNTPHEKQVMMFSATLSKDIRPVCLKFMQDP MEVYVDDEAKLTLHGLQQYYVKLKDNEKNRKLFELLDLLEFNQVVIFVKTVQRCMALAQL LVEQNFPAIAIHRAMTQEERLSRYQQFKDFQKRILVATNLFGRGMDIERVNIVFNYDMPE DSDTYLHRVARAGRFGTKGLAVTFVSDETDAKTLNEVQDRFDVNISELPDEIDISSYIEG R NT seq 1266 nt NT seq  +upstreamnt  +downstreamnt atggccgacaacgatttgttggactacgaggacgaagaggagcaggagcagaccgccggg gagcccatcccggaggtgaagaagccgactgggggctacgtgtccatccacagctccggt ttcagggacttcttgctcaagcccgaactcctgcgcgccattgtggactgcggcttcgag cacccttccgaagtacagcatgagtgcattccccaagcgatcctgggcatggacatcctg tgccaggccaagtctggtatgggcaagacagccgtgtttgtgctggccactctgcagcag ctggaccctgtggacggacaggtgtccgtgctggtgatgtgccacacccgagagctggcc ttccagatctcgaaggagtacgagcggttctccaagtacctgccctcagtgcgggtgggg gtgttcttcgggggcatgaacatcagcaacgatgagaagctgctgaagagcagctgcccc cacgtggtggtggccaccccgggcagggccctggctttggtgcgctctcgcaagctccag ctcaagcacatcaagcactttgtgctcgacgagtgcgacaagatgctcgagcagctcgac atgcgtcgagacgtgcaggaaatcttccgcaacacaccccacgagaagcaggtcatgatg ttcagcgccacgctgagcaaggatatccggcccgtctgcctcaagttcatgcaagacccg atggaggtgtatgtggacgacgaggcgaagctgaccctgcacgggctgcagcagtactac gtgaagctgaaggacaatgagaagaaccgcaagctctttgagctgctcgacctgctcgag ttcaaccaggtggtgatctttgtgaagaccgtgcagcgctgcatggccctcgcccagctg ctggtagagcagaacttccccgccattgccatccaccgcgccatgacacaggaggaaagg ctttcccggtaccagcagttcaaggacttccagaagcgcatactggtggcaaccaacctg tttggccgaggcatggacattgagcgggtcaacatcgtcttcaactacgacatgccagag gactctgacacatacctccacagggttgctcgagcgggaagattcggtaccaagggcctg gcagtgaccttcgtctccgacgaaacggatgccaagacattgaacgaggtccaagaccgc tttgacgtcaacatctccgagctgcccgacgagatcgacatttcctcttacattgagggg cgctga

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