Ixodes scapularis (black-legged tick): 121833229
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Entry
121833229 CDS
T01131
Name
(RefSeq) DNA damage-binding protein 1-like
KO
K10610
DNA damage-binding protein 1
Organism
isc
Ixodes scapularis (black-legged tick)
Pathway
isc03420
Nucleotide excision repair
isc04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
isc00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
121833229
09124 Replication and repair
03420 Nucleotide excision repair
121833229
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
isc04121
]
121833229
03400 DNA repair and recombination proteins [BR:
isc03400
]
121833229
Ubiquitin system [BR:
isc04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Adoptor protein
121833229
DNA repair and recombination proteins [BR:
isc03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Cul4-DDB2 complex
121833229
TCR (transcription coupled repair) factors
Cul4-CSA complex
121833229
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_RSE1_2nd
CPSF_A
Beta-prop_RSE1_1st
Motif
Other DBs
NCBI-GeneID:
121833229
NCBI-ProteinID:
XP_042142298
LinkDB
All DBs
Position
Unknown
AA seq
1143 aa
AA seq
DB search
MSYNYVVTAHKPTGVCACVTGNFTSPNDINLILAKNTRLEIYVVSPEGLRPVKEIGIYGR
ISIMKLFRPPGEKKDLLFFLTAKYNAAILECIQDGGDGGVEIITKAHGNIADSFSRPSET
GNIGIIDPECRVIGLRLYDGLFKVIPLDRDNRELKAFNIRMEELTVQDMEFLHGCKTPTI
VLLHQDSQARHMKTYEISLKDKEFVKGPWKQDHVESEATIVIAVPEPFCGALVIGQESIT
YHNGDQYVVITPHLIRQSTIVCYGKVDANGSRYLLGDMAGRLFMLLLEREDKMDGTTTVK
DLKLEFLGEITIAECMTYLDNGVVYVGSRLGDSQLIKLNSERNEQGSYVEVMEVFTNLGP
IVDMCVVDLERQGQGQLVTCSGAFKEGSLRIIRNGIGIHEHASIDLPGIKGIWPLRVNTD
SSRDNTLVLSFVGQTRVLMLSGEEVEETELAGFDISQQTFFCGNVRNNQLIQVTAAAVRL
VDGKTKLLLNEWKPPGGKNISVVTCNQNQVVCAVRQEVFCLEIADGTLKQTSNAEMENEV
ACLDITPLNDGSGKSDLCAVGLWTDISIRVLRLPSLEQLQKENIGGEIIPRSILMTTFEG
VHYLLCALGDGSLFYFLLDASTGAVSDRKKVTLGTQPTVLKTFKSLSTSNVFACSDRPTV
IYSSNHKLVFSNVNLKEVNHMCPLNSEGYPDSLALANDGTLLIGTIDEIQKLHIRTVPLG
ELPRRIAYQEATQTFGVITIRNDIQGTGGLTPVRPSASTQAQNVTYSSTMSSVFKPGTGS
GNDQLGQEVEVHNLLIVDQHTFEVLHAHQFMQTEYAMSIVSTRLGSDPNVYFIVGTAIVL
PDESDPKQGRIIIFHWVDGKLQQVAEKEIKGAPYSLLEFNGKLLASINSTVRLFEWNAER
ELHNECSHFNNILALYLKTKGDFILVGDLMRSMSLLAYKPLEGSFEEIARDYQTNWMCAV
EILDDDTFLGAESTTNLFVCQKDSAATTDEDRQHLQEVGQFHLGEFVNIFRHGSLVMQHP
GEASSPTQGSVLFGTIHGAIGLVAQLPSDFYNFLLEVQGNLTKVIKSVGKIDHTFWRSFS
TERKTEQAQGFIDGDLIESFLDLSRDKMQEVLQGIQMDDGSGMKRDATVDDLIKIIEELS
RVH
NT seq
3432 nt
NT seq
+upstream
nt +downstream
nt
atgtcttataattacgttgtgactgcccacaagccgaccggcgtttgtgcatgcgttaca
ggcaacttcacctcgcccaatgacatcaaccttattctcgcgaagaatacgaggctcgag
atatacgtggtgtcgcccgaaggcctgcgacctgtcaaggaaatcgggatctatggcagg
atcagcatcatgaagctgttccggccgccgggcgagaaaaaagacctattgttctttctg
acggccaagtacaatgccgccattttggagtgcattcaggacggcggtgatggcggtgtt
gagatcatcacgaaagcccatggaaacattgctgactcgttttcgagaccctcggagact
ggcaacatcgggatcattgatccggagtgccgggtgattggtttgaggctctatgatggg
ctgttcaaggtcatccccttggacagggacaacagggagctgaaggccttcaatatcagg
atggaggagctaacggtgcaggacatggagttccttcacggctgcaagacgccgaccatt
gtgctgctgcaccaggacagccaggcgcgccacatgaagacctacgagatctccctcaag
gacaaagagttcgtcaagggtccctggaagcaggaccacgtcgagagcgaggccaccatc
gtcatcgcagtgcccgagcccttctgtggtgccctggtcattgggcaagaatcaatcacc
tatcacaacggtgaccagtatgtggtcatcacccctcatctcatcagacaaagcaccatc
gtgtgctacggaaaggtggacgcgaacggctctcgctacctcctgggagacatggctggc
cgtctgttcatgctcctgctggagcgagaggacaagatggacggcacgaccactgtcaaa
gacctcaagctcgagttcctgggagagatcacgatagcggagtgcatgacatacctggac
aacggggtggtgtacgtgggctcgcggctgggcgactcgcagctgatcaagctcaactct
gagcgcaacgagcagggctcttacgtggaggtcatggaggtcttcaccaacctgggcccc
atcgtggacatgtgcgtggtggacctcgagagacagggccaggggcagctggtgacctgc
tcgggcgcctttaaggagggctctctgcgcatcatccgcaatggcatcgggatccacgag
catgccagcatcgacctgccaggcatcaagggcatctggccgctcagggtcaacacggac
agctccagagacaacaccctcgtcctgtccttcgtcggacagaccagggtccttatgctg
agcggtgaagaggttgaagagacagaactggccggcttcgacatctcccagcagacattc
ttctgcggcaatgtccgcaacaaccagctcattcaggtgacggccgcagcggtgaggttg
gtggacggaaagacgaagctcttactcaatgagtggaagcctcccggcggtaagaacatc
agtgtggtgacgtgcaaccagaaccaggtggtgtgtgcggtgcggcaggaggtgttctgc
ctcgagatcgccgacggaacgctcaaacagaccagcaatgcggagatggagaatgaggtg
gcctgtctagacatcacacctctcaacgatggctctggcaagtctgacctctgtgctgtc
ggactctggacggacatctccatccgcgtgctgaggttgccttccctcgagcagcttcaa
aaggagaacattggcggcgaaataattccgaggtccatcttgatgacaacatttgagggg
gtgcactatctgttgtgtgccctgggagacggctccctgttctatttccttctggacgct
tccaccggtgccgtcagcgacaggaagaaggtgacactgggcacccagcccacagtgctg
aagaccttcaaatcgctgtcgaccagcaacgtgtttgcgtgttcggaccgccccaccgtc
atctactcgagcaaccacaagctggtgttctccaacgtcaacctcaaggaggtcaaccac
atgtgccccctcaactccgagggctaccccgacagtttggcattggcaaatgacggcacc
ctgctgattggcaccatcgacgagatccagaagttgcacatcagaacggtgcccctggga
gagttgcccaggaggatcgcgtaccaggaagcgacgcagacatttggcgtcatcacgatc
cggaacgacattcagggcacgggaggcctgacacccgtcagacccagtgcgagcacccag
gctcagaacgttacctacagttcaacaatgagctcggtgttcaagcctggaacaggcagc
ggaaacgaccagctcggccaagaggtggaggtccacaaccttctcatcgtcgatcaacac
accttcgaagtgctgcatgcacaccagttcatgcagacggagtacgccatgagcatcgtt
tccacgcggctcggcagcgaccccaacgtgtacttcatcgtgggcacagccatcgtgctt
ccggacgagtcagaccccaagcaggggcgcatcatcatttttcactgggtggacggcaag
ctgcagcaggtcgcggagaaggagatcaagggggccccctactcgctgctggagttcaac
ggcaagctgctggcaagcatcaacagcacagtgcggctgttcgagtggaacgcggaacgg
gagctgcacaacgagtgcagccatttcaacaacatcctggccctctatctcaagaccaaa
ggggacttcatcctggtcggggacctcatgcgctccatgtccctccttgcctacaagccc
ctcgagggaagcttcgaggagattgcgcgggactaccagaccaactggatgtgcgccgtc
gagattctggacgatgacacgttcctcggggctgagtccaccaccaacctgtttgtgtgc
cagaaggacagtgccgcgacgacagacgaagaccgtcagcacctgcaggaggtcggccag
ttccacctgggcgagtttgtgaacatcttcaggcatggatcactagtgatgcagcacccc
ggcgaagcctcgtcccccacccagggatcggtgctctttggaaccattcacggtgccatt
gggctggtcgcgcagctgccctccgacttctacaacttcttgctcgaagtccagggcaac
ctaaccaaggtcatcaaaagcgttggcaagatcgaccacaccttctggcgttctttctcg
acggagcggaagacggagcaagcgcaagggttcatcgacggcgacctcatcgagagtttt
cttgacctcagtcgagacaaaatgcaagaagttcttcagggaatacagatggacgacggt
agcggcatgaagagggacgccaccgtcgacgatttaatcaagatcatagaagagctgagc
agagttcactga
DBGET
integrated database retrieval system
