Ixodes scapularis (black-legged tick): 8023427
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Entry
8023427 CDS
T01131
Name
(RefSeq) DNA-directed RNA polymerase I subunit RPA2
KO
K03002
DNA-directed RNA polymerase I subunit RPA2 [EC:
2.7.7.6
]
Organism
isc
Ixodes scapularis (black-legged tick)
Pathway
isc03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
isc00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
8023427
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
isc03021
]
8023427
Enzymes [BR:
isc01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
8023427
Transcription machinery [BR:
isc03021
]
Eukaryotic type
RNA polymerase I system
RNA polymerase I
Core subunits
8023427
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_1
RNA_pol_Rpb2_3
RNA_pol_Rpa2_4
RNA_pol_Rpb2_7
RNA_pol_Rpb2_2
zf-Sec23_Sec24
Sulfatase
Zn_ribbon_8
Zn_ribbon_Nudix
Motif
Other DBs
NCBI-GeneID:
8023427
NCBI-ProteinID:
XP_029831423
LinkDB
All DBs
Position
Unknown
AA seq
1133 aa
AA seq
DB search
MDAFTEFPEKPSLRKTLTHEFGKLPNKQYKVIQNVSKAHIESFNYMLKEGLSRAVADIPP
SEFALPNGDRIKIEMKDPFIGNPMISKNTIGVVTPQIYPAECRNRGTTYRGKLDVTLCWS
LNGVQQDVIKKTAGEVPIMVKSQVCNLSKLSPKELVQRGEESEEFGGYFVVNGNEKIIRM
LIMTRRNYPIAMMRNSWKNRGKMYSEYGVSLRSVKPDQTGTNMVLHYLTNGTVQVMFSYM
KEIFFMPVMMLLKALCDVTDYHIYSELVAGKENDSFYKGCIINMLRQVQNENLLTRDEVR
SYIGGKFRVCMRLPEWYSDEQVALFLLRHCICIHLDSNFDKFNLILLMIKKLFALAKGEC
AIESSDNPMNHEVLLPGHLYLMVLKEKLGSFLFSIRQNIEKKAKSLGKAFKLTPAMFSKV
LGTAWEVTGAMNYFLATGNVVTKSGLGLMQFSGTTVLAEKLNYWRYLSHFRCVHRGAFFA
EMRTTTVRKLLPEAWGFLCPVHTPDGSPCGLLNHMTAMVEMVNQQHSVAHLTSLLTGLGM
FSLDGARPEVSRAYVVVLDGRVLGYVEDDRAPSLVTTLRTMKAHGLNKVPPTLEIGFVPK
TSKASQYPGLFLFSTVARMMRPVLNVATGTVEWIGTFEQVHLNISVIPDEAHEGVTTHQE
LRQTSMLSVLGNMIPYSDFNQSPRNMYQCQMGKQTMGTPCQALRYRSDNKLYRIQTPQTP
FVRPTAYDHYHMDDFPTGTNAIVAVISYTGYDMEDAMVLNKSSVERGFKHGCVYKTELVN
LRVLAGDTGRQTSLVFGRKATDKYLEGKVDLDGLPYIGVKVEQNDPVCSFVNLVTGETKV
HKYKSTESAYIHDVKLLGNDTGTDLLQNICITYWIQRNPMIGDKFASRHGQKGVCSQLWP
IENMPFTESGMTPDIIFNPHGFPSRMTIGMMIESMAGKSATLHGFVHDATPFKFSENQPA
SEYFGELLKKAGYNYHGTERMYSGVDGREMEANIFFGVVYYQRLRHMVADKYQVRTTGPV
DTLTHQPVKGRKRAGGIRFGEMERDSLLAHGSSFLLQDRLFNCSDRSLAYVCRKCGSVLS
PLIEKPDGDVVRKWVCPACQTGDFVDTISMPYVFRYLAAELAGINMGIKLHIK
NT seq
3402 nt
NT seq
+upstream
nt +downstream
nt
atggacgcctttacagagtttccggagaaaccttcgttgcgaaagacgttgactcacgaa
ttcgggaaactaccaaacaagcagtacaaggttattcaaaatgtcagcaaagcccacata
gagtctttcaattacatgctaaaggaaggactgtcgagagccgtggcggacattccccca
tctgaatttgcattgcccaatggagacagaatcaagattgaaatgaaggaccccttcatc
ggcaaccctatgatcagcaaaaatacgatcggcgtggtgacaccacagatttacccggct
gaatgcaggaaccgagggaccacatacagggggaagttggacgtcaccctttgctggagc
ttgaatggagtccagcaggacgtgatcaagaagactgctggagaggtgcccatcatggtg
aagtctcaagtgtgcaacctgtcgaagctgtctccaaaagagcttgtgcaaaggggcgag
gagtctgaggaattcggagggtactttgttgtcaacggcaatgagaaaatcatcagaatg
ctcatcatgacgaggaggaactatccaattgccatgatgcggaactcatggaaaaacagg
ggcaagatgtactctgaatacggcgtctctctgcgatcggtgaagccggaccagactggc
accaacatggtgcttcattacctgaccaacggcaccgtccaggtaatgttctcgtacatg
aaggagatcttcttcatgccggtcatgatgttgctcaaggccctgtgcgacgtcacggac
taccacatctacagcgagctcgtggcgggcaaagagaacgactccttctacaaggggtgc
atcatcaacatgctgagacaggttcagaacgagaacctgctcacgagggacgaggtgagg
tcttacattgggggaaagttccgggtctgcatgaggttgccggagtggtacagcgatgag
caagttgccctctttcttctgaggcactgcatttgcattcatttggactcaaacttcgac
aagttcaatctcatcttgctcatgataaagaagctgtttgcacttgccaagggggagtgt
gccattgagtcatctgacaaccctatgaaccatgaagttctattgcctggtcatctctac
ctgatggtcctcaaggagaagttgggctcatttcttttttccatccgacaaaacattgaa
aagaaggccaaatctctcggaaaggcattcaagcttacacctgccatgttcagcaaggtg
ctgggaacggcgtgggaagtgacgggtgccatgaattacttcctggccacgggcaatgtg
gtcaccaagtccggcctggggctgatgcagttctccggcaccaccgtgctggccgagaag
ctcaactactggcgctacctgtcccacttccgctgcgtccaccgcggagctttctttgcc
gagatgcgcaccaccactgtccgcaagctgctgccggaggcctgggggtttctgtgcccc
gtccacacgcccgacggttcgccctgtggcctgctcaaccacatgacagctatggtggag
atggtgaaccagcagcacagcgttgcccatcttacgtcgctgttgaccggactcggcatg
ttttccctggacggggccagaccggaagtttccagggcctacgtcgtcgtcctggacggc
agagtgctcggctacgtggaagacgacagagcaccgtccctcgtgaccaccctgcgtacc
atgaaggcgcacggccttaacaaagtgccaccaactttagagattggttttgtccccaag
acgagcaaggcctcccagtatccggggctatttttgttctccaccgtggcgcgtatgatg
cggccagtgctcaatgtcgccacaggaacggtggaatggattggcacttttgagcaggtc
cacctcaacatctccgtaatccccgacgaggcccatgagggggtgaccacccaccaggag
ctaaggcagacaagcatgttgagcgtgctgggcaacatgatcccatactcggacttcaac
cagagtcctcgaaacatgtaccagtgtcagatggggaagcagacgatgggcacgccttgc
caggcgctgcgttaccggtcggacaataagctgtaccgaatccagaccccgcagacgccg
tttgtgcgccccactgcctacgaccactaccacatggatgactttcccacggggaccaat
gcaattgtagccgtcatttcatatacgggctacgacatggaagacgcgatggtgctgaac
aagtcgtcggttgagcgcggctttaagcatggctgcgtctacaagactgagctggtcaat
ttgagggtgctggcgggggacacggggcggcagacgtccctcgtgttcggccgcaaggcc
acggacaagtacctcgagggaaaagtggacctggacgggctgccctacatcggcgtcaag
gtcgagcaaaatgaccccgtctgcagcttcgtaaacctggtgacgggggaaaccaaagtt
cacaagtacaagagcactgaaagtgcctacatccatgacgtcaagcttctgggcaacgac
actggcaccgaccttctccagaatatctgcatcacttactggattcagaggaatccaatg
atcggagacaagtttgccagtcgtcacggccagaagggcgtttgcagccagctgtggccc
atcgagaacatgcccttcaccgaaagtgggatgaccccagacatcattttcaaccctcac
ggttttccgtctcgaatgaccatcggtatgatgatcgagagcatggctggaaagtcagct
acactgcatggatttgtacatgacgccacaccgttcaagttctccgagaatcagcctgcc
tccgagtactttggggagctgctgaagaaagctgggtacaactaccacggcaccgaaagg
atgtattcaggtgtggacggtcgagagatggaggcgaacatcttttttggcgtcgtctac
taccagaggctgaggcacatggtggctgacaagtatcaggtgagaaccacgggcccagtt
gacacactgactcaccagcccgtaaaaggacgtaagagagcgggtggtattcgtttcgga
gagatggagcgtgattccttgctggcccacggctcctcattccttctgcaagaccgcttg
ttcaactgctccgacagatctctcgcgtatgtctgtcgcaagtgtggcagcgtgctctct
ccgctcatcgagaagccagatggggatgtggttcggaagtgggtctgtccagcttgtcaa
acgggtgacttcgttgacaccatcagcatgccatatgtgttcaggtacctggccgccgaa
ttggccggcatcaatatgggcatcaaactccacatcaagtga
DBGET
integrated database retrieval system
