Ixodes scapularis (black-legged tick): 8023593
Help
Entry
8023593 CDS
T01131
Name
(RefSeq) cleavage and polyadenylation specificity factor subunit 3
KO
K14403
cleavage and polyadenylation specificity factor subunit 3 [EC:3.1.27.-]
Organism
isc
Ixodes scapularis (black-legged tick)
Pathway
isc03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
isc00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
8023593
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
isc03021
]
8023593
03019 Messenger RNA biogenesis [BR:
isc03019
]
8023593
Transcription machinery [BR:
isc03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
8023593
Messenger RNA biogenesis [BR:
isc03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
8023593
U7-dependent histone pre-mRNA processing factors
8023593
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CPSF73-100_C
Beta-Casp
Lactamase_B_6
Lactamase_B
RMMBL
Anti-Pycsar_Apyc1
Lactamase_B_2
Lactamase_B_3
Beta_lactamase3
Gp58
DUF4457
Motif
Other DBs
NCBI-GeneID:
8023593
NCBI-ProteinID:
XP_002402161
LinkDB
All DBs
Position
Unknown
AA seq
698 aa
AA seq
DB search
MAASMDAPGGDSPKRKADTQVPAEESDLLLIRPLGAGQEVGRSCIILEFKGKRIMLDCGI
HPGMSGLDALPYVDLIEADEIDLLLVSHFHLDHCGALPWFLQKTTFKGRCFMTHATKAIY
RWLLADYIKVSNIGTEQMLYSETDLEASMEKIETINFHEEKEVNGIRFWCYNAGHVLGAA
MFMIEIAGVKVLYTGDFSRQEDRHLMAAEIPNIHPDVLIIESTYGTHIHEKREEREARFT
GLVHDIVNRGGRCLIPVFALGRAQELLLILDEYWSNHPELHDIPIYYASSLAKKCMAVYQ
TYVNAMNERIRRQITINNPFVFKHISNLKSIEHFEDVGPCVVMASPGMMQSGLSRELFES
WCTDPKNGVIIAGYCVEGTLAKTILSEPEEISTMVGQKLPLKMSVDYISFSAHTDYQQTS
EFIRTLKPPHIVLVHGEQNEMGRLKAAIVREYEDDVETRIEVHNPRNTQAVELYFRGEKT
AKVMGSLAVQAPEPGRQLSGVLVKRNFSYHLLSPADLAKYTDMVMSTVGQRMSLNYSGSF
QMLHFFLNQLSGDVEIVEGAKKALRVFGKVTVVQESPGMVLLEWNSSPMNDLFADAVITV
VLRAQCSSTPSRSLPSTLIKVDRMHFTECLMETLAEMFGEDSVGKVVKGERMMVTVNDRS
AHINLRSLEVQCEGDDVLQQIVTTAVTKLYNSMAPLKV
NT seq
2097 nt
NT seq
+upstream
nt +downstream
nt
atggccgcttccatggacgcgccgggtggtgacagtcccaaaagaaaagctgacacgcag
gtacctgccgaagaaagtgatctgcttctaatccgaccgctgggcgcgggccaagaagtc
ggacgatcatgcattatcctcgagttcaaaggcaagcgcatcatgctcgactgcggcatc
cacccgggcatgtcgggactcgacgcgctcccctacgtcgacttgatcgaagcggacgag
atcgacttactactcgtaagccacttccatctcgaccactgcggcgctctgccctggttc
ctgcagaaaacgacgttcaagggccgctgtttcatgacccacgcgactaaagccatctac
cgctggctcctggccgattacatcaaagtcagcaacatcggcactgaacagatgctctat
tcggagacggacctagaggcgagtatggaaaagatcgagacgatcaacttccacgaggag
aaggaggtgaacgggattcggttctggtgctacaacgcgggccacgtcctcggcgcggcc
atgttcatgatcgagatcgcaggagtcaaagttctttacacaggcgacttctcgcggcag
gaggaccggcatctgatggccgccgagatccccaacattcacccagacgtgctcatcatc
gagtcgacgtacggcacccatatccacgagaagcgagaggagcgcgaggctcgcttcacg
ggcctggtgcacgacatcgtgaaccgcggtggccgatgcctcatcccggtcttcgccctc
ggccgcgcccaggagctcttgctcattctcgacgagtactggtccaaccaccccgagctg
cacgacatcccgatctactacgcgtcgtcgctggccaaaaagtgcatggccgtctaccag
acgtacgtgaacgccatgaacgaacgtatcagaagacagatcaccatcaacaacccgttc
gtcttcaagcacatctcgaacctcaagagcatcgagcatttcgaggacgtggggccatgc
gtcgtcatggccagtcccggcatgatgcagagcgggctctcccgcgagctttttgaaagc
tggtgcactgacccgaagaacggtgtcatcattgccggctactgcgtggaagggacatta
gccaagacaattctctccgagccggaggagatctccacgatggtcggccagaagctgccg
ctgaagatgtccgtagactatatctcgttctcggcccacaccgactaccagcagacgagc
gagttcatccggacgctgaagccgccacacatcgtgctcgtgcacggcgagcagaacgag
atggggaggctgaaggcggccattgtccgggagtacgaagatgacgtcgagacgaggatt
gaggtgcacaacccacgaaacacgcaggccgtcgagctctacttcaggggtgagaagacg
gcgaaggtgatggggtcgctggcggttcaggcgcccgagccgggacgccagctgtccggg
gtcctggtgaagcgcaacttcagctaccacctgctgtcgccagccgacctggccaagtac
acggacatggtgatgagcacggtgggacagcggatgagcctcaactactccggctcgttc
cagatgctgcacttcttcctcaaccaactctcgggggacgtcgagatcgtcgagggcgcc
aagaaggcactacgcgtcttcggcaaggtcaccgtggtgcaggagagtccgggcatggtc
ctgctcgagtggaactcaagccccatgaacgacctgttcgcagacgcggtcatcaccgtg
gtgctgcgtgcacagtgttcttcaaccccgagcagaagcctgccctcgacgctgatcaag
gtggaccggatgcacttcaccgaatgcctcatggagacgttggcggagatgtttggcgag
gactcggtcggcaaggttgtgaagggcgagcgcatgatggtgaccgtcaacgaccgaagc
gcccacatcaacctcaggagcctggaagtgcagtgtgagggcgacgacgttctccagcag
atcgtcaccacggcggtcaccaaactgtacaactccatggcgccgctcaaggtgtga
DBGET
integrated database retrieval system
