KEGG   Ixodes scapularis (black-legged tick): 8023763
Entry
8023763           CDS       T01131                                 
Name
(RefSeq) chromatin assembly factor 1 p55 subunit
  KO
K10752  histone-binding protein RBBP4
Organism
isc  Ixodes scapularis (black-legged tick)
Pathway
isc03082  ATP-dependent chromatin remodeling
isc03083  Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:isc00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03082 ATP-dependent chromatin remodeling
    8023763
   03083 Polycomb repressive complex
    8023763
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:isc03036]
    8023763
Chromosome and associated proteins [BR:isc03036]
 Eukaryotic type
  Nucleosome assembly factors
   Histone chaperones
    CAF-1
     8023763
  Histone modification proteins
   HAT complexes
    HATB complex
     8023763
   HDAC complexes
    Sin3A-HDAC complex
     8023763
   Polycomb repressive complex (PRC) and associated proteins
    PRC2.1
     8023763
    PRC2.2
     8023763
  Centromeric chromatin formation proteins
   Kinetochore proteins
    MIS16-MIS18 complex
     8023763
  Heterochromatin formation proteins
   Other heterochromatin formation proteins
    8023763
  Chromatin remodeling factors
   NuRD complex
    8023763
   NuRF complex
    8023763
   NuRF complex (fruit fly)
    8023763
SSDB
Motif
Pfam: WD40 WD40_CDC20-Fz CAF1C_H4-bd WD40_Prp19 Beta-prop_CAF1B_HIR1 Beta-prop_RIG_2nd Beta-prop_EIPR1 Beta-prop_TEP1_2nd WDR55 Beta-prop_EML_2 EIF3I WD40_WDHD1_1st Beta-prop_WDR75_1st WD40_MABP1-WDR62_2nd Beta-prop_EML WD_LRWD1 Beta-prop_WDR90_POC16_2nd WD40_RFWD3 Beta-prop_WDR19_1st ANAPC4_WD40 Beta-prop_DCAF12 WD40_MABP1-WDR62_1st eIF2A Beta-prop_RIG_1st Beta-prop_SPT8 NBCH_WD40 MIOS_WD40 Beta-prop_NUP159_NUP214 Beta-prop_IFT122_1st Beta-prop_DCAF4
Other DBs
NCBI-GeneID: 8023763
NCBI-ProteinID: XP_040063891
LinkDB
Position
Unknown
AA seq 421 aa
MADKDAVEERVINEEYKIWKKNTPFLYDLVMTHALEWPSLTAQWLPDVTRPEGRDYSIHR
LILGTHTSDEQNHLLIASVQLPSEDAQFDATHYDSEKGEFGGFGSVSGKIDIEIKINHEG
EVNRARFMPQNPCIIATKTPSSDVLIFDYTKHPSKPDPSGECSPDLRLRGHQKEGYGLSW
NPNLNGHLLSASDDHTICLWDINATPKENKVVDAKTIFTGHTAVVEDVAWHLLHESLFGS
VADDQKLMIWDTRSNNTNKPSHTVDAHTAEVNCLSFNPYSEFILATGSADKTVALWDLRN
LKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSAEDAEDGPPE
LLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQVWQMAENIYNDEEQETPATELEASA
S
NT seq 1266 nt   +upstreamnt  +downstreamnt
atggcagacaaggacgccgttgaagagagagtgatcaatgaggagtacaagatatggaag
aagaacactccttttctctatgacctcgtcatgacccacgctctggagtggcccagcctc
acagcccagtggctcccagacgtgactcgtcctgaaggaagggactacagcattcacagg
ttgattttggggacacacacatctgatgaacagaaccacctgctcatagcaagcgtacaa
ttgccaagtgaggatgctcagtttgatgcaactcactacgatagcgagaaaggagagttt
ggtggttttgggtcggtcagtgggaagattgacatcgaaatcaagatcaatcacgagggg
gaagtgaacagagcgcgctttatgccgcaaaacccgtgcatcatcgccacgaagaccccc
tcgagcgatgtgttaatcttcgactataccaaacacccctcaaagcctgaccccagtggt
gaatgtagtcccgatctcagacttcgcggtcatcagaaggaaggatatggcttgtcttgg
aatccaaatctcaatggccaccttttgagtgcctcagatgaccacaccatttgtctctgg
gacatcaacgctaccccaaaagagaataaagtggttgacgctaaaaccatcttcacagga
cacaccgccgttgttgaagatgtggcatggcatctactccacgagagcctttttgggtca
gtagcggatgaccagaaactgatgatctgggacacccgctccaacaacacaaacaagcct
agccacaccgtcgatgcacacacggcagaggtgaactgcctctctttcaacccctacagc
gagtttatcctggccacagggtcagccgacaagacggtggccctgtgggacctgcgcaac
ctgaagttgaagctgcactcctttgagtcgcacaaggacgagatcttccaggtgcagtgg
tcgccccacaacgagaccatcctggcctcgagcggcacggaccggcgcctccacgtctgg
gacctgagcaagattggcgaggagcagtccgccgaggacgccgaggacgggccccccgaa
ctcctgttcatccatggaggacacacagcaaaaatctcggacttctcgtggaaccccaac
gaaccctgggtcatctgttcggtttcagaagacaacataatgcaagtctggcagatggcc
gaaaacatctacaatgacgaggaacaggagacacccgcgaccgaactcgaagcttccgcc
tcgtag

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