Ixodes scapularis (black-legged tick): 8025839
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Entry
8025839 CDS
T01131
Name
(RefSeq) replication factor C subunit 1 isoform X1
Organism
isc
Ixodes scapularis (black-legged tick)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RFC1
AAA_lid_RFC1
BRCT
AAA
AAA_22
PTCB-BRCT
AAA_14
AAA_30
RuvB_N
Rad17
AAA_16
AAA_18
AAA_5
AAA_17
nSTAND3
AAA_33
Zeta_toxin
AAA_28
RNA_helicase
Motif
Other DBs
NCBI-GeneID:
8025839
NCBI-ProteinID:
XP_040061824
LinkDB
All DBs
Position
Unknown
AA seq
1035 aa
AA seq
DB search
MDIRKFFTPTSSFAKKPSNEEPKKSVVAAPTKGKSKQAKAAKEPKQTKPAKDKETKRSPA
RNFKSSKNEEEEVAPKKTEAKKQRSRIIVHDSDTDEEDPLPKKARKQQRSSTVLVSDSDD
DSDPPKDPKPTVSKSPTPPARVSPRKKPKTNGSDPPAKKLVPVTAEDFFGSTPKPKLSLS
KKLAQAKEVSKAKEAHHDEDFEKTLERLDEREEKACPPLRSSPRKTASVATKQDATETTP
KVVSPNKGKKATTRPPMEDKISTRKTPEKEKLKEPEPPRVSSPVVMLERIAEPTKKAPKK
EEKPSAVQPAEAKKEVSPAVRRGNSAGYRSYLDREGPRLLGTRDIPEGSPGCLKGVTLVI
TGVLECIERDDTRALLERCGAKVTQSVSRNTTYLVAGRDSGPAKLRKAEECKVKILDEDG
FFELIESRSGGGSSTKKGGGTEPEGALPAEAAPEQGAPSKKRKAEADDEPAEMKIPRVSV
SPPEKADVDVAAPSTSKASPSRLPSAQGQMWVDRYRPQTTKQIIGQQGDKSNCHKLRLWL
QNWHKSRAGPKRPPPKWGGGGGDGSAFKAALLSGAPGVGKTTTANLVAREAGFSVLELNA
SDTRSKKSLKQEVAELLGNQTLTGEGLSSKHMLIMDEVDGMAGNQDRGGVQELIALIKST
RIPIVCICNDRSHPKMRSLVNYCFDLRFYRPQIKQIQAAMMSIACKEGLSVTPAVVQEII
MASNQDVRQVLHNLSLWTARTKGISSEQVKADTGKGTKDIRLGPFDVVRKILSSAEGGQS
LSLGEKSALFFHDYSMVPMFVQDNYIHVQPLAAQGDKKRHLRLLVEASESICQGDLIERQ
IRSCGSWSLLPMQAFFSSVIPGELMRGQLREMVSFPAWFGKNSSLGKRQRLLQELYMHMH
TRVSANRTQLHMDYLSPLLHSLTQPLIAKGADGVPSTLGLMGHYFLQRADLDTVAELSLW
PGMKDPWSRVDSKVKAALTRALNKEGFMTPYATDDMVKKKGKRGSSKTAKGTAEPEEEDN
YAEEEDPDPTLVDYD
NT seq
3108 nt
NT seq
+upstream
nt +downstream
nt
atggatattcgaaagttcttcactcctacaagttctttcgcaaagaagccaagcaacgag
gagcccaaaaagagtgttgttgcagctcccaccaagggaaagtcgaagcaagccaaggct
gcaaaagaacccaagcagaccaagccagccaaagacaaggagacaaagagatctccggcg
cggaatttcaagagctctaaaaatgaagaggaggaagtggcccccaagaaaacggaggca
aagaagcagcgtagccgaattatagtgcacgattcagataccgacgaagaggatcccctt
ccgaaaaaggcaagaaaacaacagagaagttccactgttttggtcagcgacagtgacgat
gactcggatccgcccaaagatccgaagccaacagtatccaagtcgcccacgcctcctgcc
cgagtgtcgccgagaaagaagccaaaaacgaatggttctgatcctccggcaaagaagctg
gtgcccgtgactgctgaggacttctttggttccactcctaaacccaagttgtcgctctcc
aagaagcttgcacaggcaaaagaggtgtccaaagcaaaggaagcacaccacgatgaggac
tttgaaaagacactcgagagactggacgagcgagaagagaaagcgtgtcccccgctacgc
tcaagtccacgcaagactgctagtgtggcgacaaagcaggatgccacggaaacgacacct
aaagtggtatcaccaaacaaaggaaagaaggcaaccaccagaccaccaatggaggacaaa
atcagtaccagaaagaccccagagaaggaaaaactcaaagagccagagcctccacgtgtt
tcctcgcctgtggtgatgttggaaaggatagcagagcccacgaagaaggcaccaaagaag
gaggaaaagccatcagctgtgcagccagcagaggcaaagaaagaagtgagtcctgctgtg
aggaggggcaattcagccggctacagaagctacttagacagggagggccccaggctgctg
ggaacaagggacatcccagagggatcgcccgggtgcctgaagggggtgactctggtgatc
acgggagtgctggagtgcatagagcgagacgacacgagggcgctgctggagaggtgcggt
gccaaggtcacccagagcgtgagccgcaacaccacataccttgtggcgggcagggactcc
ggcccggccaagttacgcaaggcagaggagtgcaaagtgaagatcctggacgaggatggc
ttttttgagctcatcgagagtcgctccggtggcgggagttccacaaagaaaggagggggg
acggaaccggaaggtgcgttgccagccgaggccgcgccggaacaaggagcgccgtcgaag
aaaaggaaagccgaagctgacgacgaacctgccgagatgaagattcccagggtttccgtt
tctcctcccgagaaagcggacgtcgacgtcgcagctccctcgacgtccaaagcgtcgccg
tcaaggctgccttctgcgcaggggcagatgtgggtggaccggtaccgcccccagacgacc
aagcagatcattgggcagcagggggacaagagcaactgccacaagctcaggctgtggctg
cagaactggcacaagagcagggcgggacctaagaggcccccacccaagtggggaggtgga
gggggagacggctctgcattcaaggctgccctgctctctggtgctcccggagttggcaag
accaccactgccaacctggttgctcgggaggccggcttcagcgtgctggagctgaatgct
tcggacacgaggtccaagaagagtctgaagcaggaggtggctgagctgctgggcaaccag
acgctcacaggtgaaggcctctcctccaagcacatgctcatcatggatgaagtggatggc
atggctggcaaccaggacaggggaggtgtccaggagctgatagcgctgatcaagagcacc
cgcatccccattgtgtgcatctgcaatgaccgatcccaccccaagatgcgctccctggtg
aactactgcttcgacctgcgattctacaggccgcaaatcaagcagatacaggcagccatg
atgtccatcgcgtgcaaggaagggctgtctgttactcctgctgtagtgcaagagatcatc
atggcttccaatcaggatgttcggcaggtgctgcacaacctttcactctggactgctcgc
acaaaggggatcagcagtgagcaagtcaaggctgataccgggaagggcacaaaggacatc
aggctgggtccctttgatgtggtacgcaagatcttgtcctcggcagagggcggccaatcg
ctctccttgggggaaaagtcggcgctcttcttccacgactactccatggtgcccatgttt
gtgcaagacaactacattcacgtccagccattggcagcccagggcgacaaaaagcgtcac
cttcgcctcctggtggaggcatcggagagcatctgccagggggacctgatagagcggcag
atcaggtcgtgcggctcctggtccctgctgcccatgcaggccttcttctccagtgtcatt
cccggggagctgatgaggggtcagctgcgcgagatggtcagcttcccagcctggtttggc
aagaactcctccctgggcaagaggcagcgcctgctccaggaactgtacatgcacatgcac
accagggtttcggcgaaccgaacgcagctgcacatggactacctgagccccctgctgcat
tccctgacccagcccctgatagccaagggcgccgatggcgtgccgagcaccctcggcctc
atgggtcactacttcctccagagggccgacctggacaccgtggccgaactctccctctgg
ccgggcatgaaggacccctggtctcgggtggactccaaggtgaaagctgcactgacgagg
gccctcaacaaggaaggcttcatgaccccctatgctaccgatgacatggtcaagaagaag
gggaagagggggtcgtccaaaacagctaaagggactgcagagccggaggaagaagacaac
tatgcggaagaggaggatcccgacccgactcttgtggattatgactag
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integrated database retrieval system
