KEGG   Ixodes scapularis (black-legged tick): 8026967
Entry
8026967           CDS       T01131                                 
Name
(RefSeq) THO complex subunit 4-A
  KO
K12881  THO complex subunit 4
Organism
isc  Ixodes scapularis (black-legged tick)
Pathway
isc03013  Nucleocytoplasmic transport
isc03015  mRNA surveillance pathway
isc03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:isc00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    8026967
  09122 Translation
   03013 Nucleocytoplasmic transport
    8026967
   03015 mRNA surveillance pathway
    8026967
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:isc03019]
    8026967
   03041 Spliceosome [BR:isc03041]
    8026967
Messenger RNA biogenesis [BR:isc03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    EJC complex
     8026967
    TREX complex
     8026967
Spliceosome [BR:isc03041]
 Complex C
  Other components
   EJC/TREX
    8026967
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   TREX complex
    8026967
SSDB
Motif
Pfam: RRM_1 FoP_duplication FYTT Btz
Other DBs
NCBI-GeneID: 8026967
NCBI-ProteinID: XP_029833456
LinkDB
Position
Unknown
AA seq 254 aa
MTDKIDMSLDDIIKLNRGQYRTTRGRGRGAGRGRGTFAGRGAARGFGAGAGGAVRRGTLR
GRVRQQPYARPKELPDRWQHDMFEGVGTRRTLGALGGTTAGPSKLLVSNLDYGVSDADIK
ELFAEFGPLRKAAVHYDRSGRSLGTADVVFERRTDSVRAMKQYNGVPLDGRPMNIQLVTS
SVGAATLSPASRLGYAANVGNLGGGVQQQRTRGTFRGRGRGRGARGGGAGGAPRKVPTAE
ELDAELDAYVNKME
NT seq 765 nt   +upstreamnt  +downstreamnt
atgacagacaagatagacatgtccttggacgacatcatcaagctgaaccgaggacagtac
cggacgacaaggggtcgaggcagaggagccggacgcggtcgcggcaccttcgcgggccgc
ggcgccgcacgtggatttggcgccggtgccggcggcgcagttcgacggggaaccctccgg
ggacgagtacgccaacagccatacgccaggcccaaggagcttccagaccggtggcagcat
gacatgtttgagggcgtgggtacccggcgcaccctgggggccctgggaggcaccacggct
ggaccgtccaagctgctagtctccaacttggactatggcgtgtccgacgcagacatcaag
gagctgtttgcagagtttggccccctgcgcaaggcggcggtgcactatgacaggtcgggc
cgatctctcggtacggcagacgtcgtgtttgagcggcgcacagactccgtgcgtgccatg
aagcagtacaacggggtacccctcgacggtcggccgatgaacatccaactggtgacgtct
tctgtgggagctgccaccctctctccggcgtcgcggttgggatacgcagccaacgtgggc
aaccttggcggtggagtccagcaacagaggaccaggggcactttccggggtcgcggcaga
ggtcgtggggctcgtggcggcggcgccggcggggctcctcggaaggtcccgaccgccgaa
gaactcgatgccgaattggacgcctacgtcaacaagatggagtga

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