KEGG   Ixodes scapularis (black-legged tick): 8027906
Entry
8027906           CDS       T01131                                 
Name
(RefSeq) splicing factor U2AF 50 kDa subunit
  KO
K12837  splicing factor U2AF 65 kDa subunit
Organism
isc  Ixodes scapularis (black-legged tick)
Pathway
isc03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:isc00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    8027906
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:isc03041]
    8027906
Spliceosome [BR:isc03041]
 Complex A
  U2 snRNP components
   U2 related factors
    8027906
 Complex B
    8027906
SSDB
Motif
Pfam: RRM_1 RRM_MUD2_C RRM_occluded DUF8489 RRM_7 RRM_9
Other DBs
NCBI-GeneID: 8027906
NCBI-ProteinID: XP_029849821
LinkDB
Position
Unknown
AA seq 471 aa
MGEEREIDKDKDRRRERRRSRSTSRGRERRKRSRSREPRRRSRSREKVVVPGGPKKSRRR
KPSLYWDVPPPGFEHITPLQYKAMQASGQIPATMLAATGALATAAVASVGGGLGGGMGAV
GGGSLAGSTPLAPAAIAPVAPAVPIVGSTITRQARRLYVGNIPFGCSEEEMMDYFNAQMH
ACGFSQAPGNPVLACQINLDKNFAFLEFRSIDETTQAMAFDGINFKGQSLKIRRPHDYQP
MPGMAETPSVAVPGVISTVVQDSPHKIFIGGLPNYLNEDQVRELLMSFGQLRAFNLVKDS
ATGLSKGYAFCEYVEVTTTDQAIMGLNGMQLGDKKLIVQRASVGAKNSQMNQAPVQIQVP
GLQLQGGAGPPTEVLCLMNLVCPEELKDEEEYEDILEDIHEECNKYGVVKSIEIPRPIEG
VDVPGCGKAFVEFNSVIDCQKAQQSLTGRKFSNRVVVTSYFDPDKYHRREF
NT seq 1416 nt   +upstreamnt  +downstreamnt
atgggcgaagaacgagagatcgacaaagacaaggacaggcgtcgcgagcgccgtcgcagt
cgctcgacatcgaggggccgtgagcgcaggaagcgctctaggtcacgtgagcccaggagg
aggagtcgcagcagggagaaggttgtggtcccgggcggcccaaagaagtcccggcggagg
aagccctcgctgtactgggatgtgccgcctccggggtttgagcacattactccgctccag
tacaaggccatgcaggcctctggccagatcccggcgacgatgctggcggctacgggggcc
ctggctacggctgcagtggcgagtgtgggcgggggtctcgggggtgggatgggggcggtg
ggaggagggagcctggcgggcagcaccccgctggccccggccgccattgcccccgtggcc
cccgccgtgcccatcgtgggcagcaccatcacccggcaggcgaggcgcctctacgtcggc
aacatccccttcggctgctcagaggaggaaatgatggactacttcaatgcccagatgcat
gcctgtgggttctcccaggcaccgggcaaccctgtgttggcctgccagattaatctggac
aagaattttgctttcttagagtttcgctcgatcgacgaaaccacccaggcgatggccttt
gacggcatcaacttcaagggtcagagcttgaagatccggagacctcacgattaccagccg
atgcctggaatggcggaaacgccttccgttgccgttccaggtgttatttcgacggtagtg
caggactctccgcacaaaatattcattggtggattgccaaactatctaaacgaagaccag
gtgagggagcttttaatgtcctttgggcagctgcgtgcattcaatctcgtgaaagacagc
gcaacgggactctccaaggggtacgcgttctgcgagtatgtggaggtcaccaccacagac
caggctatcatgggacttaatggaatgcagcttggagacaagaagctgattgtacagaga
gcaagtgttggtgcgaagaacagtcaaatgaaccaagcaccagtacaaatccaagtacca
ggcttacagttgcaagggggcgccgggcctccgactgaggttctgtgcctcatgaacctt
gtctgcccggaggagttgaaggacgaggaagagtacgaggacatcttggaggacatccac
gaggagtgcaacaagtacggcgtcgtcaagagcatcgagatccctcgccccatcgagggc
gtcgacgtgccgggatgcggaaaggcctttgtcgagttcaactcggtcatcgactgccag
aaggcgcagcagagcctgaccggacgcaagttcagcaaccgcgttgttgtcacatcctac
ttcgatccggacaagtaccaccgtcgggagttctag

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