Ixodes scapularis (black-legged tick): 8028838 Help Entry 8028838           CDS       T01131                                  Name (RefSeq) focadhesin   KO K27498   focadhesin Organism isc  Ixodes scapularis (black-legged tick) Brite KEGG Orthology (KO) [BR:isc00001]  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03019 Messenger RNA biogenesis [BR:isc03019]     8028838 Messenger RNA biogenesis [BR:isc03019]  Eukaryotic type   mRNA degradation factors    3'-5' decay     Other 3'-5' decay factors      8028838 BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  DUF3730 Focadhesin NepR Utp12 Motif Other DBs NCBI-GeneID:  8028838 NCBI-ProteinID:  XP_029829078 LinkDB All DBs Position Unknown AA seq 1748 aa AA seqDB search MEDLKAMLNFDGASVQRKAVKKISERITLSVAPGQPLAADSTKKPAEFDLLLESCCHSNS VVSHDCCEALLALVVNGHLDWKFAITQLLGALYASKNNTGAAILVIGKLLQTQMQGEIQA KAKYKCPFALRSPTHPLVLVLREKPDSWRSVLEVVQLSFDEHQGWETFEMLSPLFDYVLL SPLWPLEHAALRMGLFRIIGGPKFCHQQEAFLRASLQWLPLTDAAELAQVVAILEELCPL VELHYPNLCGWCATYTLSVCLHAHQHQVTCLMLLRQVQRLCEASKECDFLTDVCIVVLSV FLTKASLPYIGRLLHICDVLLKQNAGSSLVAWVLTLPLAQLVVQPPDSGPSAGQRSRLQA SAVALLKQMEAFDPEDSKKRPLLPHRFRAPLTNLGGTCELLCDAMLVAKVLYEYNQLDCE RREPFIKTLGGMHRSREHPNFLIALTASAIVTSTEDAGVVGAALGVILSTISATVELGTS VFPLMLYKLGRCRAPDTILVLLKSLPKTAVHKYCIPPLYNALQALSANPVLKACCIASMA QLYAKQPQSFPLLLKALREEEEDSCYDDVLLAKAAAIGDVIKHDPSMHGVDMLGPLSLIV SKHSKYHQSAAVVLALQGIYNLCKSEVIDVKTTLAAIVPKLWRDERPQVLRSLYHLMSVV PVLSVPSIEYEKFEMETAAKLWKVVDKVNEPATTGGAYRALAAFSTSCHTLKVLPDAAKK NLKIPASKISTPMDLGRNPEDVLNYAPGYCFIDLLQSIEDPGILKDYVEFLSALLRSEVN SMPRSAYSTLHLRLRPDTKDRNLKAAPQLLCSLYEGNRHPSIQSSIAIGTLLTYEPPLQC DSAGNPTKDALINQNRFYKHLLGSLLQDVPLDANDWYRSFLVPSAWCLFMERAFRAAEES RRAELEYLRSHGKLPGTAEEVAARLGTCWLWARDMLTDAIRKSCIGRASLQGNALLALSA LLVTVMEYYNGLDTASKQHASHASDHVSPTDWTNAGLEIVSACLNDKLDYRGNMFEWIFK NSTKAGSSAASLLRGCAAVSTRWILPYLHQKDPKALSILLEQMMNHLNTEQSKTTQLFVG IGLGSFVQAAAREGILETSEGTGGKGLVAYLTKNLTAACFAGEDSEPRVGDLVCLTLCLS GLSQARDEDLKNTVLKACAQFCELLHTMDSRSCSFEVHCLCTSILICSAASTLLTIENVE ELFLWFEKRRQEHPQCAGTSMSLGLLVHTMVGMNHSKGEILHSSLLSHWLSVVASESQPT LSRLAAIKGLCVLLTGGRVLLMNMEEPSANTTKGLKQASELLTSLLNVSKDTGLMNCSAW ILGQLHIALSGQTQSTSSVPASYAYLSDQSVLRPLTNFVSAATKSGLVNAHVFACLRALN QDFPRALPPFNWTSLLTPILKDTDDADLATLILGVAVRNGVSSLSMGSFLASCASLPVLH TLLPECVDLLVSALSTVVRVVPSSKLRPFLKLVAIRAASSSQGAEVAVKGLKEVLQSSDL QPSTTLLVCETVVELFSRLENSFRAFLGNSRSEVLADCFVLLPESAQATLLDGTKSLTLM IYLHCQLFRKGKRSIGSICNPFTAACSLPQGERADVLRMLLTCLDLESSEAGATSDVIGW FADCLMAVKETTQSPSLDVALLRFQLQLVSLFSIAFGGLYIRQNAVEQSDLASVLLLLLP RALRCLLRLPKWEGINQVVLEWLVGLVNEPIPQEFKDLLLGSVCSLRSVDQFKSPSLWAR AVPHVGLC NT seq 5247 nt NT seq  +upstreamnt  +downstreamnt atggaggacctaaaggcaatgctgaactttgacggagcgtcggttcagcgcaaagccgtg aaaaagatttccgagcggattaccctcagcgtggcgcctggacaaccgcttgcagcggac agcactaaaaaacctgcagagttcgacttgctgcttgaaagctgttgccacagcaactct gtagtgagccacgactgctgtgaagctttgcttgcgcttgtcgtgaatggccacctggac tggaagtttgccattactcagctactaggagcactctatgcatccaaaaacaacacgggt gctgccatcttggtcataggaaagcttctccaaactcaaatgcaaggagaaatacaagca aaggcaaagtacaagtgtccgtttgcacttcggagccccacacatccacttgtgcttgtt ctccgagaaaagccggattcttggagatccgtgctggaagtggtccagctttcgttcgac gaacatcagggatgggagacatttgagatgctctcgccactctttgactatgtgctgctc agtccgctatggcccttggagcatgctgctttgcggatggggctcttcaggataatcggt ggtccgaaattctgccaccagcaagaggcctttctgagggcgtccctgcagtggctacct ttgacggatgctgcagaacttgctcaggttgtggcgatacttgaagagctttgtccactg gtggagcttcactatcctaatttatgtggctggtgtgctacatacacgctgtcagtctgt cttcacgctcaccaacatcaagtcacttgcctcatgttgctgcgtcaggtgcaaaggctc tgcgaggcgtcgaaggagtgtgactttttgacagatgtttgcattgttgtgctatctgtc ttcctgacaaaagcttcgctgccatacatcggaaggcttcttcacatatgtgacgttctg ctgaagcagaatgctggctcctcactggttgcttgggttctcaccttgccgttggcacaa ctggtggttcagcctccagactccggtccttccgccggacagaggtcgagactccaagca agcgctgtggcactcctcaaacagatggaagcatttgatccggaagattccaagaagcgg cccttattgccgcaccggtttcgcgctccgctaacgaaccttggtggaacttgcgagctt ctctgcgatgccatgctggttgccaaggtcctctacgagtacaatcagttggactgtgag agacgcgaaccattcatcaagaccctcggtggaatgcaccgttcgagagaacacccaaat ttccttatcgccttgactgcatcggctattgtcacatcgaccgaggacgccggcgtggtt ggtgctgccttgggcgtcattttgagcaccatttctgcaaccgtcgagttgggaacgtcc gtctttcctctgatgctgtacaagctgggcagatgcagggcccccgacacaatcttagtt ctcctcaaaagcctccccaagactgccgtccacaaatactgcatcccaccgctgtacaat gccttgcaagccctgtctgccaaccctgtgctgaaggcgtgctgcatcgccagcatggcc cagctttacgccaagcagccgcaaagcttccccctcctgctcaaggcgctgcgcgaagaa gaagaggactcgtgctacgacgacgtgctgctcgcaaaggcggctgccatcggcgacgtc atcaaacacgacccctcgatgcatggcgtggacatgctgggtccgctttccctgattgtg agcaagcacagcaagtaccaccagtctgctgctgtggtgcttgcattgcaaggcatctac aacctctgcaagtccgaggtgatagatgtgaagacaaccttagcagcgattgtccccaag ctatggagggacgaaaggccccaagtgctgagaagcctttaccacctgatgtccgtggtg cccgtgctgtcggtgccttccatcgagtacgagaagtttgagatggagacggcagccaaa ctctggaaggtcgtcgacaaagtcaacgaaccggcgaccactggtggggcctacagggcc ctggctgctttttcgacctcctgccacacgctcaaggttctacccgatgccgccaaaaag aacctgaagatcccagcatctaaaatatcaacaccaatggacctcggacgaaatcccgaa gatgtgctgaactacgcgccgggctattgtttcattgatttactgcaaagcatagaggat cctggaatcctgaaagactacgtggagttcctgtcggcattactgcgaagcgaagtgaac tcgatgccacgctctgcgtactcgacgctacatcttcgattgaggcccgacacgaaggac agaaacctgaaggcagcgccgcaactgctttgctcactgtatgaaggaaaccgacaccca agcatccagagcagcattgcaattggaacgctgctgacttacgaaccgcccctccagtgt gattctgctgggaacccaacaaaggatgccctcataaaccagaacagattctacaagcac ctgttgggctccctccttcaggacgttcccctggatgcgaacgactggtatcggtccttc ctggtcccttcggcgtggtgcctttttatggagcgtgcgttcagggcagcagaggaaagc cgcagggcagagctggagtacctgcggtcccatgggaaactgcccggcactgcagaagag gttgcagcccgtctcggcacatgctggctctgggcaagggatatgttgactgatgctatc aggaaaagctgcataggccgagcttctctgcaaggcaatgctctgctggctctctcagca ttgctggtcacggtgatggagtattacaacggactcgacacagcctctaagcagcacgct tcgcacgcatccgaccacgttagtccgacggattggaccaatgccggcttggagattgtg tccgcctgcctgaacgacaagctagactaccgtgggaacatgtttgagtggatcttcaag aactcgaccaaggcaggttcaagcgcggcgtctttgctgcgcgggtgtgcggccgtaagt acgcgctggatcctgccttacctgcaccagaaggaccccaaggccctgtcaatactgctt gagcagatgatgaaccacctgaacaccgagcagtctaagaccacccagctctttgtgggc ataggccttggctcctttgttcaagctgctgccagggagggcattctcgagacctccgaa gggaccggggggaaagggctcgtggcgtacctgaccaaaaacctgacagcagcctgcttt gcaggcgaggacagcgaaccgagggtgggcgaccttgtctgcctcactctctgcctttcg ggcctgagccaggcgagggacgaggacctcaagaacacggtcctcaaggcgtgcgcccag ttctgcgagctcctccacaccatggactcgaggtcttgttcgtttgaggttcactgcctc tgcaccagcattctgatctgcagcgcagcgtcgacgctcttgacgatcgagaacgtcgag gagcttttcctctggtttgagaagcggcgccaggagcatcctcagtgcgcaggaacgtcc atgtccctgggactcctggtccacacgatggttgggatgaaccattccaagggagaaatc ttgcacagttctctcctgagccactggctttcagttgtggcttctgagagccagccgact ttgtctcggcttgcagccatcaaggggttgtgtgtcctgctgactggaggtcgagttttg cttatgaacatggaagagccatcggcgaacacaaccaagggcctgaagcaggcgtccgag ttgctcaccagcctcctgaacgtctccaaggacacgggcttaatgaactgttcggcctgg attctgggacagctgcacattgcactgagcggtcagacgcagtctacgtcttcagttccg gcaagctatgcctacctgagcgatcaaagtgtcctgaggcccctaacaaactttgtgtct gcagccacgaagtcaggcttggtgaatgcccacgtgtttgcgtgcctgcgtgccctgaac caagactttccgcgtgccctgccaccgtttaactggacttccttgctgactcccatcctc aaggacaccgacgacgcggacctggccacgctgatactgggcgttgccgtgcgcaatggc gtgtcttccctttccatgggctcattcttggcttcctgcgcatctctccccgtactccac acactcttgcctgaatgtgtggaccttctggtgtcagctctcagcactgttgtgagggtg gttccgtcaagcaagctacggcctttcctgaaactcgtggcgatcagggccgcctcctcc agccaaggtgcagaggtcgccgtcaagggtctgaaagaggtgctccagtcttcggacctc cagccaagtacgacgctgttggtctgcgagacagtggtggaattgttttccaggctggag aattccttccgagctttcttgggaaacagtcgctcggaagtgctggccgactgctttgtg ctgctgcctgaaagcgcccaagccaccttgttggacggaacgaagtctctgaccctcatg atatacctccactgccagttgttcagaaagggcaagcggagcatcgggtctatctgcaac ccgttcactgcagcctgcagcctgcctcagggagaaagagcagatgttcttcggatgctg ttaacgtgtctggaccttgagagctccgaagccggtgcgacgtcggacgttatcgggtgg tttgccgactgcttgatggccgtcaaagaaaccacccagtcacctagtctagacgtggcg ttgctgagattccagctccagcttgtttcgctgttttcaatcgcttttggaggcctctac atccggcagaatgctgtcgagcagtccgatttagccagtgtcctgttgcttctcctgcca agggcgctaagatgtctgctcagacttcccaaatgggagggtatcaatcaagtggtgctg gaatggctcgtgggcctcgtgaacgagcctatcccacaagaattcaaggacctgcttctg ggatctgtctgttccttgcgctccgtggaccagtttaagtctccgtcattgtgggcacgg gccgtgccacacgtgggactttgctag

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