Ixodes scapularis (black-legged tick): 8030344
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Entry
8030344 CDS
T01131
Name
(RefSeq) ATP-dependent RNA helicase DDX1
KO
K13177
ATP-dependent RNA helicase DDX1 [EC:
5.6.2.7
]
Organism
isc
Ixodes scapularis (black-legged tick)
Brite
KEGG Orthology (KO) [BR:
isc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
isc03041
]
8030344
03016 Transfer RNA biogenesis [BR:
isc03016
]
8030344
Enzymes [BR:
isc01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
8030344
Spliceosome [BR:
isc03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
8030344
Transfer RNA biogenesis [BR:
isc03016
]
Eukaryotic type
tRNA spricing factors
tRNA splicing ligase complex
8030344
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
SPRY
CMS1
Motif
Other DBs
NCBI-GeneID:
8030344
NCBI-ProteinID:
XP_029823043
LinkDB
All DBs
Position
Unknown
AA seq
737 aa
AA seq
DB search
MTAFEEMGVLPEIARAVEDMEWTLPTDVQAEAVPLILGGGDVLMAAETGSGKTGAFCLPI
LQIVWETLKDEELGRGKKGGATGAAPATKWGMSFFDRGSALAVSPNGLTTQSRDQKGWHG
CRCTKGLQYRGKYYYESKVTDEGLCRVGWSTLAASLDLGTDRQGFGFGGTGKKSFGKQFD
SYGEPFGMHDVIGCYLDLDAGTIKFSKNGIDLGEAFQIPQNLKRSPFFPAVVLKNAEMEF
NLGGTPFKHPPADGFVAVSEAPKECIVESTVTGTSVGAPKSVKNAPQAIIIEPSRELAEQ
TLKCITSFKKHLKDPVVRELLVIGGVAAKEQIEMLRNGVDIVVGTPGRLEDLISTGELSL
TQVRFFVLDEADGLLNGGNGELINRVHRQIPQITAEGRRLQMVVCSATLHSFEVKKLAER
LMHFPTWVDLKGEDSVPETVHHVVCIVDPRKDTSWMNLSRHIVTDAVHERDNIRPGATTP
ETLSEAVKLLKGEYVVRAIQQQNMDQGIIFCRTKVDCDNLESYLNQIGAANRNKSQFSCV
CLHGDRKPQERKANLETFKKGGVKFLICTDVAARGIDITGVPFVINVTLPDEKSNYVHRI
GRVGRAERMGLAISLASAVPEKVWYHSNCSSKGRNCFNTNLTDRGGCCIWYNEPQYLSDI
EDHLNVTIQQVEPDLKIPADEFDGKVVYGQKRTQAGSMYETHTAQMAPTVQELAQMERKS
QSLFIERYYLKDQSFLR
NT seq
2214 nt
NT seq
+upstream
nt +downstream
nt
atgactgctttcgaagaaatgggcgttctgcccgagattgcaagagcagtcgaagacatg
gaatggacgcttccaaccgacgtacaggccgaagctgtacctttgattctcggaggtgga
gacgtgctcatggctgcggagactgggagcgggaagactggggcgttctgcctcccaatt
ctgcagattgtgtgggagaccctgaaggacgaagagctcggacgagggaagaagggcggg
gccaccggcgctgcacccgccaccaaatggggcatgagcttcttcgacagaggatctgcc
ttagccgtgagtcctaacggtctgacaacccagagcagagaccagaagggttggcatggt
tgccggtgtacaaagggactccagtaccgggggaagtactattatgaatccaaagtgacg
gatgaaggtctctgccgtgttggctggtctaccctggctgcgtcccttgacttggggact
gaccgacagggctttgggttcggaggcactggcaagaagtcgtttggaaagcaatttgat
tcgtacggagagccctttggaatgcacgacgtcatcggctgctacctggaccttgacgcg
gggaccatcaagttctccaagaacggcatcgacctcggagaagcgttccagatcccgcag
aacttgaagaggtccccgtttttcccagcagtcgtcctcaagaatgctgaaatggagttc
aaccttgggggcaccccgttcaaacatccgccggcggacggctttgttgcagtttcggaa
gcacccaaagagtgcatcgtggagtccactgtgactggaacctcggtgggagcccccaag
agcgtcaagaatgcgccccaagccatcatcattgagccatctcgggagctggcagagcag
acactcaagtgcatcacgagcttcaagaagcaccttaaggaccctgttgtgcgggagttg
ctcgtgattggtggcgtagctgcaaaggagcaaatcgagatgctgaggaacggggttgac
atcgttgtggggacgcccggtcgtctggaagatctcatctccactggtgaactgagcctg
acccaggtgcggttttttgtcctggacgaagcggacggacttctgaatggagggaacggt
gaactgatcaaccgagtccaccgccagataccgcagattacggccgaaggacgacgtctt
cagatggtagtgtgctcggcaacacttcattctttcgaggtcaagaagttggcggagcgt
ctgatgcacttcccgacttgggtggacctgaagggagaggacagcgttcccgagacggtg
catcacgtggtctgcattgtcgatccaaggaaggacacatcctggatgaacctgagcagg
cacattgtgacggacgcggtgcacgagcgggacaacatacgcccgggtgccacgaccccg
gagaccctctccgaggcggtgaagctgctgaagggggagtatgtggtgcgggccatccag
cagcagaacatggaccagggcatcatcttctgccgcaccaaggtggactgcgacaacctc
gagagctatctgaaccagatcggagcggcaaacagaaacaagagccagttctcgtgtgtc
tgccttcacggagacaggaagcctcaggaacgtaaggctaacctggaaactttcaagaag
ggcggggtcaagttcttgatctgcacggacgttgctgcccggggcatagacattacaggc
gtcccgttcgtcatcaacgttacgctgccggatgagaagtccaactacgttcaccgcatc
ggccgtgtcggaagggctgagcggatgggccttgctatttccctcgcctctgccgtacca
gaaaaggtctggtaccactccaactgctcgagcaagggccgcaactgcttcaacaccaac
ctgaccgatcggggtggatgttgcatctggtacaacgagccgcagtacctgtccgacatt
gaagaccaccttaacgtgaccatacagcaagtggagcccgacctgaagattcctgccgac
gagttcgatgggaaggttgtgtatggccagaagaggacgcaggctggaagcatgtacgaa
actcacacggctcaaatggccccgacagtgcaggagttggcgcagatggaacggaagtct
cagtcgcttttcatcgagcgctactacctcaaggatcagtccttcctcagatga
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integrated database retrieval system
