Ixodes scapularis (black-legged tick): 8032608
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Entry
8032608 CDS
T01131
Name
(RefSeq) squamous cell carcinoma antigen recognized by T-cells 3
Organism
isc
Ixodes scapularis (black-legged tick)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
HAT_PRP39_N
Suf
HAT_PRP39_C
HAT_Syf1_CNRKL1_N
TPR_14
RRM_7
LSM_int_assoc
RRM_occluded
Lsm_interact
Motif
Other DBs
NCBI-GeneID:
8032608
NCBI-ProteinID:
XP_029826113
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All DBs
Position
Unknown
AA seq
927 aa
AA seq
DB search
MAGSVGDLTEEMDTDPENNADEPMQDESSDSDSDVNEDTEEEKHILELEDKIKSNPFHYD
SHMEFIGYLRKTGNLDKLREAREAMAKIFPLTPELWLDWIKDESKLCESDEDKERVILLF
ERAVKDYLSVALWLEYAQFSIGLMGSEGGLDRVRSVFERAITGAGLHVSQGALLWEAYRE
FEAVLLATMQPSAEEGGSSSDQRDQFVSQRNRVYNLYKRQLSVPLFGMEKTYEELREWSE
AAIEASVEQQYKKAKLRLDKIQKYETDLLVGEGTPALSTYLSYLDFEEAQGDPTRVQSLY
ERAISDHCLVPELWERYMAYLDTKLKVDAVSLPCHERSVRNCPWSSSLWVSHLKALERSH
SPHQKLTEAMEQALGAGFGQGQDYQKLWLTYLDYLRRRVDWSQGDSSEALRDLRRAFEKA
VEHLVQYQEETDLCSPILKYWAKVEAKFCDNLPKARELWNEVTHQGRATDAQTWLDFANF
ERAFGDDKHLRKTLMRGMYAAVDWPETLGDMLLNFEREEGTLETLDVATEKYDAHIRRVL
EKREKVAQKEAQKEAEQQEQLKSTRAEKKAERKAEKKAERKAEKLRQDQKAQEAHEGDQA
SHKPKVFKRKAPTAQGEEHKTDSDGFKVPTLPNSNDTEGGTDGPPSKKSKGEEKEGAVHG
ETVEPDPLRDIRTVFLSNLAYDVQDDQLTEIFKEVGTIEELRLVRDYKGRSKGFGYLVFA
DQRDVDAALAKDRTPVAGRPVFVSRCNERTQFKFQTGLEKNKLFVRGIPFSMDEKGLEEI
FGKYGDLKQIRIVTYRNGHSKGIAYVEFTNETSATVALVQTDGMQLGKHTLQVAISNPPS
RGPRNQNPQDSHGGPRPVPVASLGGGPKETGLRGRSRTQVSLMPRALQRPQPQKPQPQVK
GETVPKDALPETKGLSNADFRNLLLKK
NT seq
2784 nt
NT seq
+upstream
nt +downstream
nt
atggcgggctcagtcggcgatttgaccgaagagatggacactgatcccgaaaataatgcc
gacgagccgatgcaagatgaaagttccgactcagacagcgacgttaatgaggacaccgaa
gaagagaagcatattttggagcttgaagacaagatcaagagcaaccctttccactacgac
agtcatatggagttcatcgggtatcttcgcaagacgggaaaccttgacaaacttcgagaa
gctagggaggctatggccaagattttcccgttgacaccagagctgtggttggattggatt
aaggatgagtccaagctctgcgaaagcgacgaagataaggaaagggtgatcctgctgttc
gagcgtgctgtgaaggactatttgtcggtggccctgtggctagagtatgcccagttctcc
atagggctgatggggtccgaagggggcctggaccgcgtgcggagcgtctttgagagggcc
atcacgggagccggcctgcacgtgtcccagggggccctgctgtgggaggcctatcgggag
tttgaggccgtcctgctggccaccatgcagccgagtgcggaagagggcggctcatcaagc
gaccaacgggaccagtttgtgagccagaggaaccgagtgtacaacctctacaagcggcag
ctttccgtgccactctttggcatggagaagacctacgaggagctgagggagtggagcgag
gctgccatcgaggcctccgtggagcagcagtacaagaaggccaagctgcgccttgacaag
atccagaagtatgagacagatctgctggttggtgagggtaccccggcgctgtctacctac
ctgagctacctggactttgaggaggcccagggagaccccacccgcgtccagagcctttac
gagcgtgccatctcggaccactgcctggtgccggagctctgggagcgctacatggcgtac
ctggacaccaagctgaaggtggacgcggtgtctctcccgtgccacgagcgctctgtccgc
aactgtccctggtcctcctccctgtgggtctcccacctgaaggccctggagaggagtcac
agccctcaccagaagctcaccgaggccatggagcaggctctgggggcaggctttggtcag
ggccaggactaccagaagctctggctcacttacctggactaccttcgacggagggtggac
tggtcacagggagattcttcggaggctctgcgagacctgcgaagagcatttgaaaaggct
gtagaacacctggtacaataccaggaagagactgacctttgttcacccattctcaagtac
tgggccaaggttgaggctaagttttgtgacaaccttcccaaggccagggagctgtggaac
gaggtcactcatcagggaagggctaccgatgcccagacatggctggactttgcaaacttc
gagagggcgtttggcgacgacaagcacttgaggaagacgctgatgcggggaatgtatgct
gctgtggattggccagagaccctgggggacatgcttctcaactttgagagggaggagggc
acattggaaactttggatgtggccacagagaagtatgatgcccacattcggagggtctta
gaaaagagagagaaagtggctcagaaggaggctcagaaggaggctgagcaacaggagcaa
ttgaagagcacgcgggcagaaaagaaggcagagcgcaaagcagagaagaaggccgagcgc
aaggcagaaaagctgcgtcaggaccagaaggcgcaagaggcgcacgagggagatcaggcg
tcccacaagcccaaggtgttcaagaggaaggcacccacagcccagggagaagagcacaag
acagactcggatggattcaaggtccccactttgcccaactcaaacgatacggaaggaggc
accgacggaccaccttccaagaaatctaagggggaagagaaagaaggggccgtgcacgga
gagacggtggagccagatcccctgagggacatccggacagttttcctgagcaatctggcg
tacgatgtccaggatgatcagctgacagagatcttcaaagaggtgggcaccattgaggag
ctgcgcctcgtaagggactacaagggccgctccaagggctttggctacctggtgtttgca
gaccagagggacgtcgacgcagccctggcaaaggaccgtacgcccgtggctggacgtccc
gtgttcgtctccaggtgcaacgaaaggacccagttcaagttccagactggcttggaaaag
aacaagctgtttgtcaggggcattcccttctccatggacgagaaagggctggaagagatc
tttggaaagtacggagacctgaagcagatccggattgtcacataccgcaacgggcactcc
aaaggcattgcttacgttgagtttaccaatgagacgtctgctacagtggcgctggtgcag
acggatggcatgcagctcggcaagcacacgctgcaggtggccatcagcaaccctccgagc
aggggaccccgcaaccagaaccctcaggattcccatggagggccgaggccagttccggtc
gcctccctcggtgggggtccgaaggaaactggcctgagaggtcgtagtcgcacccaggta
tccctcatgcccagggcgttgcagcgccctcagccgcagaagccacagccgcaggtcaaa
ggagagacagtgccaaaggacgctctcccagagaccaagggcctgagcaacgcagatttc
aggaacctgctcctcaagaaatga
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