Ixodes scapularis (black-legged tick): 8033068
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Entry
8033068 CDS
T01131
Name
(RefSeq) exosome complex component RRP4
KO
K03679
exosome complex component RRP4
Organism
isc
Ixodes scapularis (black-legged tick)
Pathway
isc03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
isc00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
8033068
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
isc03019
]
8033068
Messenger RNA biogenesis [BR:
isc03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
8033068
Prokaryotic type
Archeal mRNA degradation factors
Exosome components
Core exosome
8033068
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
S1_RRP4
KH_6
ECR1_N
ECR1_N_2
EXOSC1
Motif
Other DBs
NCBI-GeneID:
8033068
NCBI-ProteinID:
XP_029827080
LinkDB
All DBs
Position
Unknown
AA seq
287 aa
AA seq
DB search
MAVSVRLFCKRPQNAAENIRPRGIVAPGDVITTDAGFMRGHGTYIENEQLLSSVAGVVEK
TNKLVTVRPLKTRYNGEVGDVVVGRIVEVQQRRWKIEMASRLNASLLLSSVNLPGGELRR
KSAEDELLMRQYLSEGDLISAEVQSVFADGSLSLHTRSLKYGKLGQGTLVLVSPSLVKRC
KTHFHNLPCGVHLILGNNGYIWIAPLLSEEGTKFVQSLELVPQVTREAVARVRNCVLALA
RHHVMLFDTSVVYAYDVSLEHKTNALLKPEIMKKVADLTKQKLLLET
NT seq
864 nt
NT seq
+upstream
nt +downstream
nt
atggcggtttccgtacggttgttttgtaagcggcctcaaaatgcggcggaaaatattcgc
ccgagaggcattgtggcaccgggcgacgttattactacggacgcaggatttatgagaggc
cacggcacttacatcgagaatgagcagcttctctcgtctgtcgccggggtcgtggagaag
acgaacaagttggtgacagtacgtcccctgaagacaaggtacaacggtgaagtcggagac
gttgttgttggacgaatcgtggaggttcagcagaggcgctggaagattgaaatggcgtcc
cgactcaacgcctcattgctactgtcttcagttaatttaccgggaggagaactgagaaga
aaatctgcagaagatgagctgctcatgcggcagtacctgtctgaaggagatctgataagc
gcagaggtccagtcagtgtttgcagatggctctctttccttgcacacaagaagcttgaaa
tatggaaagctggggcagggcaccctggtgctggtgtccccgtctctggtaaagcgctgc
aagacccacttccataacctgccgtgcggggtacacctcatcttgggcaacaacggctac
atctggattgcgcccctgctctccgaagagggcaccaagtttgtacagagcctggagctg
gtgcctcaggtgacgagagaggcggttgctcgggtcaggaactgcgtgctggccctcgcc
cggcatcacgtaatgctcttcgacacgagcgtcgtgtatgcctacgacgtttcgctcgag
cacaagacaaacgctcttctgaaacctgaaatcatgaagaaagttgcagatttgacaaag
caaaagctgcttctggaaacgtag
DBGET
integrated database retrieval system
