Ixodes scapularis (black-legged tick): 8033690
Help
Entry
8033690 CDS
T01131
Name
(RefSeq) transcription activator BRG1 isoform X1
KO
K11647
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 2/4 [EC:5.6.2.-]
Organism
isc
Ixodes scapularis (black-legged tick)
Pathway
isc03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
isc00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
8033690
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
isc03021
]
8033690
03036 Chromosome and associated proteins [BR:
isc03036
]
8033690
Transcription machinery [BR:
isc03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
8033690
Chromosome and associated proteins [BR:
isc03036
]
Eukaryotic type
Histone modification proteins
HDAC complexes
REST complex
8033690
Chromatin remodeling factors
BAF complex
8033690
PBAF complex
8033690
GBAF(ncBAF) complex
8033690
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
Bromodomain
SnAC
BRK
HSA
ResIII
QLQ
DEAD
HDA2-3
NirdL-like_HTH
Motif
Other DBs
NCBI-GeneID:
8033690
NCBI-ProteinID:
XP_029830712
LinkDB
All DBs
Position
Unknown
AA seq
1645 aa
AA seq
DB search
MASGEEIMSASPGPQLQGPPQQQQQQQQPANSHPPEGHMQGYPSDNIHMLQRAINNMEDK
EDPRYSQMLAMAGRGKPPAGGGSGGSSGAPSPIMGPPPVPQQHMGMPPEGGAPPHHGYAP
QPHMGPGAVQPQVYGGPPPQQQPPYGGGAPYQQQQPYPPQQGVPPGGGPPLQHQGVPPSH
PHHGSGADTPEPGPQGGYGGGGAPNGAGGATGPEGTPPPMPKPSLLSPPQLTQLRAQIMA
YKLLARNQPVPDHVNLAAQGTSGVGGPQGPQSQQGPYMHRPPGAPSPLMRPSPQSVGGPP
MGPQQGPYGGGGPTYGAPPPQSQQQHLQPGGGPMMGGGGAPTPPPPQGGGPMGAGGVAPQ
PGGPRAGCQAPQQAARGSPGGPTSVPAMMQMQQQKQNRITPVAKPQGIDPIELLKEKENR
LTSRIAHRIEELSKLPANLPEDLRRKAMIELRALRLLNFQRQLRAEVVQCMRRDTTLETS
LNPKLYKRTKRQSLREARLTEKLEKQQKLEQERKRRQKHQEYLAAVLQHGKDFREFHRGI
QGKVAKVNKAVVTYHANTEREQKKEQERIEKMRMQRLMAEDEEGYRKLIDQKKDRRLAFL
LSQTDEYIHNLTEMVRQHKAEQRRKLREKKKKKKKKLPQEGATAPGAEGGEGGAVEAPVE
AMVDESSQHSDLRVNVIETATGKVIEGKDAPLASQLEAWLEMHPGFEVAPREASDDEEDG
ETDESTESEDEGEEAPIQHQAVPAAPKMSSSSTDDHVKTVIQAAAAEDDEYKAGGYQNYY
NIAHAISEEVREQSSLMVNGSLKEYQVKGLEWLVSLYNNNLNGILADEMGLGKTIQTIAV
ITYLMEKKRINGPYLIIVPLSTLSNWMLEFDRWAPSVVKVAYKGSPNLRRQMSQMLRSSK
FNVLITTYEYVIKDKAVLAKIRWKYMIIDEGHRMKNHHCKLTQILNTHYSAPHRLLLTGT
PLQNKLPELWALLNFLLPSIFKSCNTFEQWFNAPFATTGEKVELNEEETILIIRRLHKVL
RPFLLRRLKKEVESQLPEKVEYVVKCDMSALQRLLYRHMQTKGVLLTDGSEKDKKGKGGT
KTLMNTIMQLRKICNHPFMFQHIEEAYAEHIGCSGGVVQGPDLYRVSGKFELLDRILPKL
RCKGHRVLLFCQMTTLMTIMEDYLTYRGGYRYLRLDGTTKAEDRGQLLEMFNAKDSPYFI
FLLSTRAGGLGLNLQAADTVIIFDSDWNPHQDLQAQDRAHRIGQKNEVRVLRLVTVNSVE
ERILAAAKYKLNLDEKVIQAGMFDQKSTGSERKQFLQAILTQDENDEEEENEVPDDETIN
EMIARNEEELELFQKMDIDRRRDEARCIKRKPRLMEEDELPKWLLKDDAEVERLTNEEEE
DKIFGRGNRQRKEVDYSDALTDKEWLRAVEDGNLDEMETRKRSRKSVCPSNNGGGAGPSA
SVERSGGKRKGGGASRLIQEEEPPAKKRRGRPPVEKASPNPPSLTKQMKKLIDIVINYKD
SDSRVLSEAFLQLPSKRELPDYYDVIKKPVDLKKIKARIREHRYRTLDDLEDDFMLLCIN
AQTYNVEGSLIYEDSIVLQSVFTSARERLEKDGDLALGPDQDQDTDQEGQGTSADGHGSE
EKTKKRKSRQVKRYISDDDDTEESD
NT seq
4938 nt
NT seq
+upstream
nt +downstream
nt
atggcgtccggcgaagagatcatgtcggcgtcaccgggccctcaattgcaaggccctccg
cagcagcaacaacagcagcagcagcccgctaactctcatccacccgagggccacatgcag
ggctacccgtccgacaacatccacatgctgcagagggcgatcaacaacatggaggacaag
gaagacccccgctactcgcagatgctcgccatggcgggcagggggaagccccccgccggg
ggagggagcggggggagctcgggggcccccagccccatcatgggcccaccccccgtgccc
cagcagcacatgggcatgccccccgagggcggggctccaccgcaccacggctatgcaccc
cagccccacatgggacccggcgcggtccagcctcaggtttacgggggaccgccccctcag
cagcagccgccctacggtggcggggcaccctaccagcagcagcagccctaccctccccag
cagggcgtgcctcccggcgggggcccgcccctgcaacaccagggggtgcccccgtcgcac
ccccaccatggatcgggcgccgacacgcccgagccggggccccaaggtggctacggaggc
ggcggagcgccgaacggggcggggggtgccacaggccccgagggcacccccccacccatg
cccaagccctccctgctgagcccgccgcagctgacccagctccgggcccagatcatggcg
tacaagctgctggcccgcaaccagccggtgccggaccacgtcaacttggccgcgcaggga
acctccggcgtgggcggaccccagggacctcagtcgcagcaggggccctacatgcacagg
ccccccggtgccccctctcccctgatgcgcccgtccccccagtcggttggagggcccccc
atgggaccccagcaggggccgtacgggggcggcggccccacttacggagcgcccccgccc
cagtcccagcagcagcacctccagcccgggggcggtcctatgatgggagggggcggggcc
cctacgcctcctcctccccaggggggcggtcccatgggggcggggggcgtggccccgcag
ccgggtggtcccagggctggctgccaggcgccccagcaggcggctagaggcagtcccggg
ggacccacgtccgtgcctgccatgatgcagatgcagcagcagaagcagaaccgcatcaca
ccggtggccaagccccagggcatcgaccccatcgagctgctgaaagaaaaggagaaccgg
ctgacgagccgcattgcccaccgcatcgaggaactgtccaagctgcccgccaacctgcct
gaggacctgcggcgcaaggccatgatcgagcttagggcactcaggctgctcaacttccag
cggcagctgcgggcagaggtggtgcaatgcatgcgccgggacacgaccctggagacgtcc
ctgaaccccaagctgtacaagcgcaccaagcggcagagcctccgcgaggcgcggctcacg
gagaagctggagaagcagcagaagctggagcaggaacgcaagcggcgccagaagcaccag
gagtacctggcggcggtgctgcagcacggcaaggacttccgggagttccaccggggcatc
cagggcaaggtggccaaggtgaacaaggcagtggtgacctaccacgccaacacggagcgg
gagcagaagaaggagcaggagcgcatcgagaagatgcgcatgcagcggctcatggccgag
gacgaagagggctaccgcaagctcattgaccagaagaaggaccgccggctggccttcctg
ctctcccagacggacgagtacatccacaacctcactgagatggtgcgccagcacaaggcc
gagcagcgccgcaagctgcgagagaagaaaaagaagaagaagaagaagctgccccaggag
ggcgccaccgcaccgggggccgagggcggagagggcggggccgtcgaggcgcccgtcgag
gcgatggtggacgagagctcgcaacacagcgacctgcgcgtgaacgtgatagagacagcg
acgggcaaggtgatcgagggcaaggacgcgcccctggccagccaactggaggcctggctc
gagatgcacccagggtttgaggtggcgccccgggaagcgagcgacgacgaggaggacggc
gaaaccgacgagtcaaccgagtctgaggacgaaggggaagaggctccgatccagcaccag
gcggtgccagcggcgcccaagatgtcgtcgtcttcgacggatgaccatgtgaagactgtc
attcaggccgcagctgcggaagacgacgagtacaaggcaggcggctaccagaactactac
aacattgcgcacgcaatcagcgaagaggtgcgcgaacagtcgtcgttgatggtgaacggc
tcgctcaaggagtaccaagtgaaggggctggagtggctggtctccctctacaacaacaac
ctcaacggcattctcgccgacgagatggggcttgggaagaccatccagaccatagccgtc
attacgtaccttatggaaaagaagcgtatcaacggaccatacctgatcatcgtaccactc
tcgaccctgtcgaactggatgctggagtttgaccgatgggccccgtccgtggtgaaggta
gcctacaagggctcgcccaacttgcgacgccagatgtctcagatgctgcgcagtagcaag
tttaacgtgctcatcaccacctacgagtacgtcatcaaggacaaggccgtgctggccaag
attcggtggaagtacatgatcattgacgagggtcaccgcatgaagaatcaccactgcaag
ctgactcagatcctgaacactcactacagcgccccccacaggctgcttctcacgggaacg
ccactgcagaacaagcttcccgagctctgggctctgctcaacttcctgctcccaagcatc
ttcaagagctgcaacacctttgagcagtggttcaatgcgcccttcgctaccaccggcgag
aaggtggagctgaacgaggaggagacgatcctcatcatccgtcgtctgcacaaggtgctc
cgaccgttcctgctccgccgtctcaagaaggaagtggagtcgcaactccccgaaaaggtg
gagtacgtggtgaagtgtgacatgtcggctctgcagcggctgctctatcgtcacatgcag
acgaagggcgttcttctgacagacggatccgaaaaagacaaaaagggtaagggtggaacc
aagacgctgatgaacaccatcatgcaactgcggaagatctgcaaccacccgttcatgttc
cagcacattgaggaggcctacgctgagcacattggttgcagcgggggcgtagtccaggga
cccgacctgtaccgagtgtccggcaagtttgaactgctggaccggattcttcccaagctc
cgctgcaaggggcacagggtgctgctcttctgccagatgaccaccctgatgaccatcatg
gaagactacctaacctacagaggtgggtaccggtatctacgcctcgacggtacaaccaaa
gcggaggaccgtggtcagctgctggagatgttcaacgccaaggattcgccctacttcatc
ttcctgctgagcacccgggctgggggcctggggctcaacctgcaagccgccgacactgtc
atcatctttgactcggactggaacccccaccaggacctgcaagcccaggaccgtgcccac
cggattggccaaaagaatgaggtgcgtgtgctgcgcctcgtcacggtcaattcagtggag
gaacgcatcctggccgcagccaagtacaagctgaacctcgacgagaaagtgatccaggcg
ggcatgttcgaccagaagtcgacgggctcggagcgcaaacagttcctccaggccatcctc
acgcaggacgagaacgacgaggaggaggagaacgaagtcccggacgacgagaccatcaac
gagatgattgctaggaacgaagaagaactggagctctttcagaaaatggacattgaccgg
aggagggacgaggcccggtgcatcaagcgcaagcccaggctcatggaggaggacgaactc
cccaagtggctgctcaaggacgacgccgaggtggaacgcctcaccaacgaagaagaggag
gacaagatcttcgggcgtgggaaccgccaacgcaaggaggtcgactattcggatgcactc
actgacaaggagtggctgcgggcggtcgaagacggcaacctggacgagatggagacgagg
aagcggtcccgcaagtcggtctgcccgagcaacaacggaggcggggccggcccgtccgcc
agcgtggagcggagtggcgggaagcggaaggggggcggggcctcgcggctcatccaggag
gaagagccacccgccaagaagcggaggggacggccccccgtggagaaggcgtcgcccaac
cccccgtcgctcaccaagcaaatgaagaagctcatcgacatcgtcatcaactacaaagac
agcgatagccgcgtgctgagcgaagccttcctgcagctcccttcgaagcgagaacttccg
gattactacgacgtgattaagaaaccggtggatttgaagaagattaaggcgcgaatccgg
gagcaccgctaccgcacactggacgacctggaggacgacttcatgctgctgtgcatcaac
gcccagacgtacaacgtggaggggtcgctcatctacgaggactccatcgtgctccagtcg
gtgttcaccagcgcccgggagcggctggagaaggacggcgacctggccctggggccggac
caggaccaggacacggaccaggaggggcagggcacctcggccgacggccacggctcggag
gagaagacgaaaaagcgcaagagccggcaggtgaagcgatacatcagtgacgacgacgac
acggaagaaagcgactag
DBGET
integrated database retrieval system
