Ixodes scapularis (black-legged tick): 8034391 Help Entry 8034391           CDS       T01131                                  Name (RefSeq) collagen alpha-2(IV) chain Organism isc  Ixodes scapularis (black-legged tick) SSDB OrthologParalogGFIT Motif Pfam:  Collagen C4 Motif Other DBs NCBI-GeneID:  8034391 NCBI-ProteinID:  XP_029849248 LinkDB All DBs Position Unknown AA seq 1775 aa AA seqDB search MRWSPAAGRDHNKSRPPSLTVAFFLVALTVLLCLPDSVDAAACKGCAIQPCLCKGEKGDV GYPGLPGSMGTDGAPGATGPDGPPGPRGERGTTGDTGDAGSKGIRGDEGAVGFPGRPGAP GKPGLDGVHGDPGINGCNGSKGDVGPRGYDGYPGPRGPVGPQGDRGAKGIPGDGGVNSIG YRGEPGDDGRPGPPGAPGLPGYHGDKGARGETGKEGNRGPPGDPGPKGVQGDGVQGPKGT KGEIGPQGEVGDPGQSTFFTMPLPTEQIPGQKGPQGEKGEVGEWGERGSRGLDGQEGIPG DDGLKGEKGDIGEDGPRGKRGKPGPEGDLGDKGQKGEPGFTGQDGMIGVKGFSGDPGRPG RPGQQGPPGPPGPYIETAESVPGPRGPQGEPGDQGPPGFDGNPGPRGPMGYRGPIGEPGV PGEQGQPGPRGIAIKGEPGEDGFPGLPGDRGREGPQGPQGPPGEKGQQGLNVMGPPGEDG RPGRDGRPGLPGVRGDPGEPGEKGTPGRGVRQVGPVGPMGLPGEQGEPGAPGRPGRDGED GFPGPRGDDCGTCPPGIPGKRGDRGEDGRPGSEGSPGFPGSMGPPGTKGDSGYQGRPGLQ GFPGIPGSDGIDGLKGEKGFPGEVIIDYYPPNSIKGERGDPGADGQRGSPGLEGLPGPDG APGIPGGGGEPGDYGDRGAPGFAGQEGFPGLSGQKGAMGDGFDGTKGQRGPPGYDGEVGV PGQVGERGDPGTPFTPEQLLEATGPPGPPGEAGRNGLEGPPGPPGKPGFDGRPGVQGDKG DHGSHGYSQQGPTGLKGYPGLSGDQGPTGRPGGRGRPGEIGLEGRPGPKGQRGIPGTGKG TGPPGPPGLPGNRGQRGFPGPAGAPGVAGPPGYSGSKGQKGEPGYTGFDGPKGIKGDRGD AGPGTYGLPGLPGYAGEKGERGDKGSRGSDGFPGTPGDKGLPGDDGLPGARGRDGIPGRQ GQPGTPGRDGFPGIPGEKGEIGDQGQPGLDGFPGESGFPGFPGLKGDKGNAGRSGFPGLP GRPGAAGERGNAGYPGLPGQRGDRATQGGRGDDGAPGEEGLEGQPGQPGFPGLPGPKGLA GEPGRALDAPEGPKGEKGQSGYPGRNGLPGFKGEMGDMGREGPKGISGEEGFPGAPGFDG RPGVPGLPGIEGEDGRPGFPGVPGIKGDEGFPGRPGLPGPPGQPGPAGPAGPDGLPGLKG ELGEPGFPGLPTSEVSKGDRGEPGRPGIPGPAGLPGDDGFPGLPGLKGALGEPGVDGFPG APGRPGPKGYPGGPGLPGLEGAPAFDIYPGQKGEEGDPGYQGLPGIPGPKGEAGDPGQPG YNGPKGYPGFTTMGPKGAQGDDGFPGSQGLDGRDGSPGESGFPGLPGLKGARGNPGYPGP SVPGLPGIDGLRGNNGQYGPKGERGYPGEIGLPGFPGVKGERGDDGLPGIPGKQGAAGFP GVKGERGDRAPMVAELRLKGEQGDPGENGLDGPRGRPGEVGLPGRDGFPGESGDIGPPGF PGPPGYFGPKGLPGDDGDNGLPGYPGTVGTPGRPGNRGPPGGPAKSRGYFFTRHSQTSRV PQCPRGTYNLWEGYSLLYILGDEKAHGQDLGSAGSCLRRFSTMPFLFCSLNNVCNFASRN DYSYWLSTPEPMPMAMTPIVGRDIQKFISRCSVCESPTQVIAIHSQTLEVPECPQGWDGI WTGYSFFMNTDSGAEGSGQPLVSPGSCLEDFRPNPFIECHGHGRCNYYTTAYSYWLATIE RNDMFRPPDPQTLKAGDLRTRVSRCQVCRRRVYVP NT seq 5328 nt NT seq  +upstreamnt  +downstreamnt atgcggtggtcccccgcagctggcagggatcataacaaaagccgaccaccttcgttgacc gtcgccttcttcctggtcgccctgactgtcctgttatgcctaccggacagcgtcgacgca gccgcctgcaagggatgtgccatccagccatgcctgtgcaaaggtgaaaaaggggatgtg ggctaccctggcctgcctggctcgatgggcacggacggagcccccggggccacgggcccc gatggaccacctggaccgagaggcgagcgtggtaccacgggcgacaccggggacgctggc agcaagggaatcagaggtgacgaaggtgccgtggggttcccagggcggcctggagcgccc ggaaaacccggtttggatggcgttcatggagacccaggcataaatggatgcaacggaagc aagggagacgttggacccagaggttatgacggatatccaggaccaaggggacctgttggc cctcaaggggaccgtggagcgaagggtatacccggtgatggtggcgtcaactctattggt tatcggggagagccaggagacgatggaagacctggccctcctggcgcaccggggcttccg ggctatcacggggacaaaggagcccgcggtgagactggaaaagagggcaaccgaggtcct cccggcgaccccggaccaaagggtgtacaaggagacggcgtgcaaggaccaaagggcaca aagggagaaattggaccccaaggtgaagtcggcgatcccggacagtcgacgttttttaca atgcctcttccgacggaacaaattcctggtcaaaaaggaccccagggagaaaagggagaa gttggagaatggggagaacgaggctcacgtggattagatgggcaagaaggaataccgggt gatgacggtctcaagggagagaaaggtgacatcggcgaagatggtccacgtggcaaacga gggaagccgggaccagaaggcgatttaggagacaagggccagaagggagaaccaggattc accggacaagacggaatgatcggtgtcaagggcttttctggagaccctggaaggcccggg agacctggacagcaaggaccaccgggaccacctgggccttacattgaaactgctgaaagt gtgccaggaccgagaggtccgcaaggagaaccaggagaccaagggccgccaggatttgat ggaaaccctggaccacgcggtcctatgggataccggggccctataggcgagcctggggtc cctggagagcaaggtcaacccggacctcgtggtattgccatcaaaggcgagccgggagaa gacggtttccccggcctgcccggagatcgggggcgtgagggacctcaggggcctcagggt ccccctggggagaagggtcagcagggccttaacgtcatgggacctcccggagaagacgga aggcccggaagggacggaaggcccgggcttccgggagtacgcggagaccccggagaacca ggcgagaaaggaacccccggtagaggcgtacgacaggtgggccccgtcggtcccatgggt cttccgggagagcagggagagcccggcgctccagggcgtcccggaagggacggagaggac ggcttccctgggcccagaggcgacgactgcggcacctgtccacccggaatccccggaaag cgcggcgaccgaggggaggacggcagaccaggatcggaaggctcaccaggattccctgga agtatgggcccaccaggaaccaagggagactccggctaccagggaagacccggtctccaa ggcttccccggcattcctggatcagacggcattgatgggctgaaaggcgagaaaggtttt cccggagaagtgatcatcgactactatcctccaaactccattaagggagagaggggtgat cctggtgccgacggtcaacgagggagtcccggtctagagggcctcccaggcccagacgga gcgccgggtatccctggtggtggcggagagccgggcgactacggagatcgcggagctcct ggttttgccggccaagagggcttccccggtctatccggacagaagggagcgatgggagac ggttttgacggcacgaagggacagcgaggtcctccgggctacgacggagaggtcggagtg ccgggccaagtgggagaaagaggtgaccccggaacccccttcacaccggaacagttattg gaagcgaccgggcctccaggcccacctggtgaggctggccgaaacggcctcgaagggcct ccaggaccaccgggaaaacctggatttgatgggcgtcccggagttcaaggagataaggga gatcacgggagtcatggctactctcagcaaggtccgacaggactgaaaggctaccccggt ctctctggtgaccagggtcctacaggcagacctgggggaagaggacgacctggtgaaatt ggtctggaaggacgcccaggtccaaagggtcaacgtggtatccctgggacaggaaaaggc accggcccgccaggccccccgggattgcctggaaacagaggacagcgtggatttcccggc cccgcgggagctcccggtgttgcgggacctccgggatactctggttccaagggccagaag ggagaaccaggctacacgggatttgatggacccaagggcatcaagggcgacagaggagac gctgggccaggaacgtatggtctccctggactgcctggttatgctggagagaaaggtgaa agaggggacaagggatcccgtggatcggatggcttccctggcactcctggcgataaaggg ttacccggagacgacgggttacccggtgcacgaggtcgcgacggtattccaggaaggcag ggacagccaggaaccccaggaagagacgggttcccgggaatacctggagagaagggagaa attggtgaccagggtcaaccaggccttgatggattccccggtgaatctggtttccccgga ttccctggactcaaaggagacaagggcaatgcaggaaggtcagggtttccaggactcccc gggaggccgggagcggcgggagaacgtggcaatgcaggatatcccggtctacctggacag aggggagacagggccacgcaaggtggtcggggagatgatggggcaccgggtgaagaagga ctcgagggacaacccggacaaccgggattccctggtcttcctggtccgaagggtcttgct ggagagcctggaagagctcttgatgctccagagggtcctaagggcgagaaaggacagtct ggatacccaggacgaaatggactaccaggtttcaaaggagaaatgggtgacatgggaaga gaaggaccgaagggcatatccggtgaggaaggatttcctggagcccccggatttgatggt cgtcctggagttcctggattgcctggaattgaaggagaagatggaaggccaggttttcca ggcgtacccggaatcaagggtgacgaaggttttcccggccgccccggtcttcccggacca cctggtcagccaggaccggctgggcccgctgggccggatggtcttcccggactcaaagga gaactcggagagcccggattccctggcctcccaacgtcggaggtgagcaagggcgacagg ggagaaccaggaaggccagggattccggggccggcgggtctccccggagacgacggattc ccaggcctccctggactcaagggggcactcggagagccgggcgtggatggctttcctggc gcgccgggaagacccggtcctaaaggatatcccggaggccccgggcttcctggattagaa ggtgcacctgcctttgatatataccctggtcagaagggagaggaaggtgaccccggatat cagggcctgcccggaattcccggcccaaaaggagaggcgggagatcctggtcaaccgggt tacaatggacccaaaggctaccccggtttcaccacaatgggccccaagggagcacaagga gacgacggtttcccgggatctcaaggtctcgatggaagggatggctctcctggagagtcc ggctttccaggcctgccaggactgaaaggagcccggggtaaccctggctaccctggtccc tccgttcctggacttccgggaattgatggtttgaggggcaacaacggacaatatggtcca aagggtgaaagaggctatcccggagaaatcggactgccaggatttcctggagtcaaggga gaacgtggggacgacggccttcctggaattccaggcaaacaaggcgctgccggtttcccc ggtgtcaagggagagcgcggagaccgtgctccaatggtggcggaactccggttgaaaggc gagcaaggagatcctggagaaaatggactcgacggcccacgggggcggcccggagaagtg ggcctgcccggtagggacggttttcccggagaatcgggagacatcggtccccccgggttc ccgggccccccgggatacttcggtccgaagggacttccaggggacgacggagacaatggt ctcccgggataccctggaacagtcggaacaccaggtcgccctggcaacagaggaccgcca ggaggtccggccaaatctcgggggtacttcttcacgaggcacagccagacatcgcgggtt ccgcagtgcccgaggggaacgtacaacctctgggaaggctactctctcctgtacatccta ggagatgagaaagcgcacggacaagacttgggaagcgccggtagctgtcttcggcgcttc agtaccatgccgttcctgttctgcagtttgaacaatgtgtgcaattttgcttcgagaaac gactacagctactggctgagcacacctgaaccgatgccgatggcaatgacgccaatcgtg ggaagagatatccagaaattcatcagccgatgcagtgtctgcgagtcccccactcaggtc atagccatacacagccaaactctggaagtgccagagtgtcctcaaggctgggatggcatt tggactggatacagtttctttatgaacaccgattccggagcagaaggcagcggccagccc ctggtgtctccgggctcatgcctcgaggacttcaggccgaatcctttcattgagtgtcac ggtcacggacggtgcaactactacacgaccgcgtacagctactggctggccactatcgag cggaacgacatgttccgccctccggacccgcaaacgctcaaggcgggcgacctccgcacc cgcgtctctcgctgccaggtctgcaggaggcgggtctacgttccctag

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