Ixodes scapularis (black-legged tick): 8036309
Help
Entry
8036309 CDS
T01131
Name
(RefSeq) beta-1-syntrophin isoform X1
KO
K24064
beta-syntrophin
Organism
isc
Ixodes scapularis (black-legged tick)
Pathway
isc04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
isc00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
8036309
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Syntrophin_4th
PDZ
PH_17
PH
PDZ_6
PDZ_2
Motif
Other DBs
NCBI-GeneID:
8036309
NCBI-ProteinID:
XP_040063843
UniProt:
A0A4D5RHM4
LinkDB
All DBs
Position
Unknown
AA seq
489 aa
AA seq
DB search
MAATTSYTRTGLLEVYAKQQWHKVLATLEEDHLSLCLDETYEAPNNNNNGTLSDGEFSDI
PDSIANTKRIVRVVKQDNNGLGISIKGGKENKMPILISKIFKGMAADMTEQLYVGDAILS
VNGEDLRDATHDEAVRALKRAGKIVDLEVKYLREVTPYFRKASVLAEMGWDFAPGGLLSR
DHVGGGPQPRGDTRRVPLLLCQLARSLTVPEPRVLELHSPDRRSVCLLRCADAAQCTAWF
NSLHAALARVMAQAVVETGHLLRDVLDQAQLQHMGWLAERTREDSVTAQWRAVFVAITDR
DLLFYDLVPWTKEAWAVPVHSVPLLHTRLVTTSSGRASVGPSPAAGSGEATTLTLRLGTR
QGVQSRVMRVETHRDLALWARHLVHGAHLAVAATKEVRFPCLFQGQECTLTLHFEEGFQL
QENRRQLTLWQFPFERLRNSGDDGMRLAWLDFGGEDGDKELDMMQCPKPFVFTLHTFLSA
KVTRMGLVA
NT seq
1470 nt
NT seq
+upstream
nt +downstream
nt
atggcggccacgacgtcgtacactcgcacaggtctgctcgaagtgtacgccaagcagcag
tggcacaaggttctggccacgctcgaagaggaccacctgagcctgtgcttggacgagacg
tacgaggcgccaaacaacaacaacaacggcacactctccgacggcgagttcagcgacatc
ccggacagcatcgccaacaccaagcgcatcgtgcgcgtcgttaagcaggacaacaacggc
ctcgggatcagcatcaagggcggcaaggaaaacaaaatgcccatcctcatcagcaaaatc
ttcaagggcatggcggccgacatgaccgagcagctgtacgtcggcgacgccatcctgtcc
gtgaacggcgaagacctgcgcgacgcgacgcacgacgaagcggtgcgcgctctcaagcgt
gccggcaagatcgtcgacttggaagtgaagtacctgcgggaggtgacgccctacttccgc
aaggcgtcggtgctggctgagatgggctgggactttgctccgggaggtctgctgtcgcgg
gaccacgtgggaggcggcccacaaccacgcggcgacacgcgccgtgtgcccttgctcctg
tgtcagctcgcacggtcgctcacagtgccggagcccagggtactggagcttcactctccc
gaccggcggagcgtgtgccttctacggtgtgcggatgcggcacagtgcacggcatggttc
aactcgctgcatgcggctctggctcgagtgatggcacaggccgttgttgagacgggtcac
ctcctgcgggacgtgctggaccaggctcagcttcagcacatgggctggctggccgagagg
acgagggaggactcggtgacggcacaatggcgcgccgtttttgtggccatcacggatcgg
gatcttctcttttacgaccttgttccctggacgaaggaggcctgggctgttcctgtgcat
agtgttcccttgttgcacaccaggctggtgacgacgagttctggcagggcctctgtggga
ccttcaccagcagcgggcagcggggaggcgacgacgctgacgctgcgcctgggcacgcgg
cagggggtgcaatcgcgggtcatgcgggtcgagacgcaccgggacctggcgctctgggcc
cgccacttggtgcacggtgcgcacctggccgtggctgccaccaaggaagtgcgcttcccc
tgcctcttccaaggccaggaatgtaccctgacgctgcactttgaagaaggcttccaactg
caggagaacaggcggcagctgactctgtggcagttccccttcgagaggctgcgaaattct
ggcgacgacgggatgcgcctggcctggctcgattttggtggcgaagatggtgataaggag
ctggacatgatgcaatgccccaagccatttgtgttcacactgcacacattcctctcggct
aaggtaacccgcatggggctggtggcgtga
DBGET
integrated database retrieval system