KEGG   Ixodes scapularis (black-legged tick): 8036788
Entry
8036788           CDS       T01131                                 
Name
(RefSeq) pre-mRNA-splicing factor RBM22
  KO
K12872  pre-mRNA-splicing factor RBM22/SLT11
Organism
isc  Ixodes scapularis (black-legged tick)
Pathway
isc03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:isc00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    8036788
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:isc03041]
    8036788
Spliceosome [BR:isc03041]
 Complex B
  Other components
   Prp19-related factors
    8036788
 Complex C
    8036788
SSDB
Motif
Pfam: STL11_N zf-CCCH_RBM22 RRM_1 zf_CCCH_4 Torus RRM_YTH1 RRM_occluded zf-CCCH_2 zf-CCCH Nup35_RRM_2 zf-CCCH_4 zf-CCCH_3 zf-CCCH_10 RRM_3 RRM_PARP14_3 zf-CCCH_PARP12
Other DBs
NCBI-GeneID: 8036788
NCBI-ProteinID: XP_029851695
LinkDB
Position
Unknown
AA seq 442 aa
MATSKSANTYNRLNWEEAEFPILCQTCLGDNPYVRMTKEHYGKECKICSRPFTVFRWCPG
GRMRFKKTEVCQTCSKLKNVCQTCLLDLDYGLPVQVRDNALSIKDEMPKSDVNKEYYSQN
VERAVAEGDAGQPYGALAKAQSPSDLLMKLARTTPYYKRNRPHICSFWVKGECKRGEECP
YRHEKPTDPDDPLADQNIRDRYYGVNDPVADKLLRRAAAMPRLEPPEDGSITTLYVGNLG
ERLTEKDLRDHFYQYGEIRQITMLARHQCAFVQFTSRTSAELAADKTFNKLILAGRRLVI
KWGRALARSEPAIAPTPSQSRPLEPVPGLPAPLPMPPEELANNYFNLACLPHPPPTFMAP
MAPPGTLPPGPPPPGTTLPPGLPPPPGMLPPGMAPPGTVPPSLAALGTAPPGTVPPLGMP
LRVHYPSQDPQRLGSTGGRNKM
NT seq 1329 nt   +upstreamnt  +downstreamnt
atggcgacctcgaaaagcgcgaacacgtacaaccgactaaattgggaagaagccgagttc
ccgatcttgtgccaaacatgtcttggcgacaacccgtacgtgcggatgaccaaggagcac
tatggcaaagagtgcaagatctgctcgcggccgttcaccgtgtttcggtggtgccccggt
ggcaggatgcgcttcaagaagaccgaagtctgccaaacctgcagtaagctcaagaacgtg
tgtcagacatgcctgctggacctcgactacggactgcccgtgcaggtgcgcgacaacgcg
ctcagcatcaaggacgagatgcccaagtcggacgtgaacaaggagtactactcgcagaac
gtggagcgcgccgtggccgagggcgacgccggccagccgtacggagccctcgccaaggcg
cagagcccaagcgacctgctcatgaagctagcgcgcacgacgccctactacaagcggaac
cgaccgcacatctgcagcttctgggtgaaaggcgagtgtaagcgtggtgaagaatgccca
taccgccacgagaagccgacggatcccgacgatccgctggccgaccagaacatccgcgac
cgctactacggcgtcaacgatcccgtggccgacaagttgctgcgtcgcgccgcggccatg
ccccggctcgagccgcccgaggatggctccatcaccacactctacgtgggcaacctgggt
gagcggctgaccgagaaagacctccgcgatcacttctaccagtacggcgagatccggcag
atcaccatgctcgcgcggcatcagtgcgccttcgtgcagttcaccagccgcacgagcgcc
gagctggccgccgacaaaaccttcaacaagctcattctggccggccggcgcctggtcatc
aagtgggggcgggcgctcgcccggagcgagcccgcgatcgcaccgacgccgtcgcaatcg
aggcccctcgagcccgtgccaggactgccggcgccgctgcccatgccgccggaagaactg
gccaacaactacttcaacctggcgtgcctgccgcacccgccgcctaccttcatggcaccc
atggccccgcctgggacgctcccgcccggccctcctccacccggcacgacgctgcccccc
gggctgccgcccccgccaggaatgttgccgccgggaatggccccccctggcacggtgccc
cccagcctggcggccctggggacggcgccaccggggacggtacccccgctcggcatgcca
ctgcgtgttcactacccgtcgcaggaccctcagcgtctgggatcgacgggcggtcgcaac
aaaatgtaa

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