Ixodes scapularis (black-legged tick): 8038113 Help Entry 8038113           CDS       T01131                                  Name (RefSeq) collagen alpha-2(IV) chain Organism isc  Ixodes scapularis (black-legged tick) SSDB OrthologParalogGFIT Motif Pfam:  Collagen C4 Motif Other DBs NCBI-GeneID:  8038113 NCBI-ProteinID:  XP_040063075 LinkDB All DBs Position Unknown AA seq 1797 aa AA seqDB search MVSPGLAKGWLLLASFLLTLYSVLAANYPTDPYNVRYRDYPRYNQSGGQNGRNGRRGYNG YTEQRNCSSCAGCRCIGEKGTRGTPGVSGPPGPPGTQGHQGPEGLPGDKGEKGDAGRDGP RGPKGERGRMGMPGFPGINGIPGIPGTPGSRGPPGLDGCNGTKGDPGGPGLPGPLGPPGP PGTPGPPGFKGEPAYGQPGSKGEKGEPGRNGQVGPPGNPGADGLPGARGDPGPEGPPGFR GVEGPVGPKGNMGIGFSGNKGEPGEKGPKGQKGPPGNCTEPVGKPPDSIAGPPGPPGMKG MKGEPGFKGEHGLPGNPGQPGRHGDLGMKGEKGLPGHPGPRGKDGYPGPVGPVGFKGDRG DDGLPGLMGTPGLKGDSGIPGDQGPRGLPGPPGLPGGGRGTAGPPGPPGPRGLPGVSGLP GKDGHQGELGPRGLQGPPGGPGLPGQAGREGPPGPKGDKGDPGLEGLPGLDGPQGHPGAI GPKGEPGPKGVPGISYPGIKGMDGSNGLDGVPGAKGERGPRGERGAPGDSLNGIPGPPGP QGPKGDKGFDGHPGTHGTPGTPGHKGEPGGSCLSCIPGAKGEKGERGLDGAKGQVGARGQ VGPQGPPGERGDDGPPGRAGAPGEEGLPGAPGRDGPKGDKGEPARISPGEFPPGIGQKGD RGNDGAPGPRGFDGRDGPPGPPGPDGLRGLKGEKGQAGPPGAPGIPGADGRPGSLGQKGE PGYGYPGTAGDRGLPGARGPPGEKGAKGERGPPAPGNVIGPIPGPPGPPGPRGRDGLDGL PGPPGRDGFPGNEGVLGLKGDKGDAGFPGMPGPRGLPGPRGEKGETGPMGFPGELGLKGH PGQPGPMGPPGPTGDPGFPGSGLPGPPGAPGYEGQKGERGYPGIPGGIGEPGLPGFPGEK GDTGFPGLPGLAGEKGSKGDAALEGAPGPPGPPGITGPVGPKGDRGYPGDSGNPGFPGLP GAKGEGGLPGLPGLPGYDGQPGLPGEPGRDSSSGFPGLPGEKGDRGPAGLPGLPGVRGSD GFPGAAGEKGDAGFPGAPGFDGPPGLPGVKGEPGLPGAPGEKGLPGFAAEKGERGFPGLP GPRGPPGQPGAPGFDGVMGPKGDAGLPGRGLPGLQGLPGDKGDDGRDGFPGTPGEKGSEG LSGFPGAKGDRGYPGLPGAPGQPGRDGEPGFPGLKGKDGNDGFPGAKGDRGNDGYPGAPG LPGPVGPVGPAGFPGLDGIRGLKGDRGYPGLPGEKGEKGFKGDEGTPGFPGVPGEKGTRG YDGTPGLPGEKGDRGFPGAPGLNGLDGERGFPGEPGAPGLQGPPGRGGVGANGEKGDRGR PGADGFPGLPGLKGDAGLPGFPGERGPPGESSAGDMPGPKGDRGFPGAPGLPGRDGYPGP KGLDGFPGLPGEKGDAGYPGPPGLPGPSGPSGLPGQDGFPGPPGVKGDKGDAGFPGIPGL AGLKGDAGYPGLPGLDGPPGINGLPGQKGEPGPANILQGDKGDRGLPGLPGASGPPGPKG FDGLPGFPGLKGELGRPGPPGLPGPVGPIGQKGDRGLPGLPGAPGLNGVAGPPGNPGPVG LPGGDYLMGILLVRHSQSSTVPTCFNGMTQLWDGYSLLYIEGNEKSHNQDLGYAGSCLRR FSTMPFLFCDFNSVCNYASRNDKSYWLSTNAPIPMMPVGEATIQQYISRCVVCEAPANVI AVHSQSMSIPECPSGGWNQLWIGYSFAMHTAAGAEGGGQSLSSPGSCLEDFRATPFIECN GARGTCHYFANKLSFWLSTIEQDFQFERPVSETLKAGKLRNRVSRCAVCIKDSNVGL NT seq 5394 nt NT seq  +upstreamnt  +downstreamnt atggtctccccgggtctggctaaaggatggttgctcctagcatcctttctactcacgctc tacagtgttctcgctgcaaattacccgacggatccatacaacgtccggtaccgggactac ccacgatataaccagtcgggaggacaaaacggacgaaacggaaggagaggctacaacggc tacaccgaacagaggaactgcagctcgtgcgcgggatgcagatgcataggagaaaaaggc actaggggcacgcccggtgtgtcgggaccaccgggaccccctggaacgcaaggacaccaa gggcctgagggtctccctggagacaaaggcgagaagggtgacgctggacgagacggcccc aggggccccaagggtgaaagaggaaggatgggaatgcccggttttcctggcatcaatgga ataccgggaattcccggtacacctggatctaggggacctcctggcttggacggatgcaat ggaacaaagggagatccaggtggccccggcctccccggtcccctcggacctcccggtccc ccgggcacccctggtccgccaggcttcaaaggagaacctgcttacggccaacccggaagt aaaggagagaaaggggagccaggacgaaacgggcaagttggaccaccgggaaaccctggg gctgacggtcttccaggagcaaggggcgaccccggaccagaaggacctccgggttttaga ggtgtggaaggaccagtgggaccgaaaggcaacatgggcatcggattctcaggaaacaag ggagaacctggggagaaaggtcccaagggtcaaaagggaccgcccggaaactgcacggag cctgttgggaagcccccggacagcattgccggcccaccgggacccccaggaatgaaagga atgaagggagaacctggatttaagggtgagcatgggcttcctggtaaccctggacaacct ggcagacacggagacctcggaatgaaaggcgaaaagggtctgccaggacatcccggaccg aggggcaaggacggttatcctggtccagttgggcctgtaggattcaagggtgatagagga gatgacggacttcccggtttgatgggaacgcccggcctgaaaggagactctggaattcct ggtgaccaaggaccacgcggtttgcctggacctcccggtcttcctggtggtggacgaggc actgccggtcctcccggaccccctggaccaagaggattgcccggagtttcgggcctcccc ggaaaagacggacaccaaggtgaactgggaccccgtggtctccagggtcctcccggagga ccgggtcttccaggacaggctggtcgggagggacctccgggcccgaagggagataaaggc gaccccggtcttgagggactgcccggtctggatggaccccaggggcaccccggcgccatt ggccccaagggagaaccaggccctaagggggttcccggtatctcctatcccggaatcaag ggcatggacggtagcaacggtctggacggcgttcctggtgccaaaggagagaggggaccg agaggagaacgaggtgctcctggtgactccctcaatggaattcccggacccccgggtcct caaggacccaagggtgacaaaggctttgacggacatccgggaacacacggcactcctgga actccagggcacaaaggcgaacctggcggcagctgcctgtcatgtatccctggtgcgaag ggagagaagggagagcgcggtttggacggagcgaagggtcaggtcggagctcggggccaa gttggaccacagggaccccctggggagagaggggacgatggaccccccggacgggctgga gcacctggtgaagaaggacttccgggagcacccggacgcgatggacctaagggtgacaaa ggagaaccagctcgcatcagccccggagagtttccacctggaataggccaaaagggagat cgaggaaacgacggagctcccggaccccgaggctttgatggacgagacggaccaccagga ccccctggccccgatggcctgagaggactcaagggagaaaaaggtcaagccggaccacca ggcgcccccggtattcctggtgcggacgggcgtcccggatcgcttggacagaagggcgag cccgggtatggataccccggcacggcgggagacagaggactaccaggagccagaggaccg ccgggagaaaagggcgccaagggagagcgtggtcctccagctcccggaaatgtaatcggg cccatcccgggaccacctggacctcccggtcctcgcggtagggatggtctcgacggactt ccgggacctcccggacgggacggatttcctggaaacgaaggcgtccttggactcaagggc gacaagggagatgctggattcccaggcatgccaggcccaagaggtcttccgggaccaaga ggagagaagggagagacaggccccatggggttccctggcgaactaggactgaagggtcac ccaggacagcccggtcccatgggcccaccaggccccacaggagaccccggattccccggc tctggtctgccaggtccccctggcgccccgggttacgaaggacagaagggagaaagagga taccctggaatacccggcggaataggcgaacctggactccccggattccctggcgagaaa ggtgacaccggtttccccggcttgcccggtcttgctggtgagaaaggaagtaagggagac gcagctcttgagggggcccccggaccccctggaccccccggtatcaccggacccgtggga cccaaaggcgaccgaggataccccggcgactctggaaaccctggattcccgggccttcct ggagcgaagggcgagggaggactccctggtcttcctggactccccggatacgacggacaa ccgggtctacccggagagccgggaagggacagctcctccggattcccaggacttccaggc gaaaagggcgacagagggcctgccggcctacccggccttcccggagtgcgcggcagtgac ggcttcccgggagccgcgggagaaaagggagacgcgggcttcccaggcgcccctggcttc gacggaccgccaggtcttccgggagtcaagggcgagccgggtctgcccggcgcgcccgga gagaagggtcttccaggatttgcggccgaaaagggagagagaggattcccgggtctacct ggtccaaggggaccaccgggacaaccaggagcaccaggattcgacggagtcatgggacct aaaggagatgctggtctgcctggccgtggtctgcctggccttcaaggacttccgggagac aagggagacgacggtcgcgatggattcccaggaactccgggcgagaaaggctccgagggt ctttccggattcccgggagcaaagggagaccgaggctaccccggccttcctggagcaccg ggtcagccgggccgtgatggcgagcccggcttccccggactgaaaggaaaggacggcaat gatggcttccccggtgccaagggcgacagaggaaacgatggatatccgggggctccgggc ctgccagggcccgttggccccgtgggcccagcgggattcccgggcttggacggcataagg ggtctcaagggagaccgcggttaccctggccttccaggtgagaaaggagagaaaggcttc aagggagacgaaggcaccccaggcttcccaggagttccgggagagaaaggaacgcgaggc tacgatggaacaccaggacttccaggggaaaagggtgaccgaggattcccaggagcgcca gggctcaatggtctcgacggagagcgaggcttcccaggtgagccaggagctccgggtctg caaggcccgccgggccgaggaggcgtaggagccaatggagagaagggcgaccggggccga ccgggtgccgacggtttccctggactacctggactcaagggtgacgccggactgcccggc ttccccggggagaggggtcctcccggagagtccagtgctggtgacatgcccggtcccaag ggtgaccgaggattccccggagccccgggacttccaggcagggacggctaccccggcccc aaggggctggacggcttcccaggccttccgggagagaagggagacgccgggtacccgggg ccccctggactaccaggaccatcaggtccatctggcttaccaggtcaagacgggttcccc ggaccaccgggagtcaagggagataagggtgacgctggtttccctggaattcctggtctt gctggactgaaaggagatgccgggtatcctggactacctggtctggacggaccccccggt atcaacggattacccgggcagaaaggagaacccggaccagccaacattctgcagggcgac aaaggagaccgaggtttacctggcctcccgggagcctctggtccccctggacccaaggga ttcgacggcctaccaggcttcccaggcctgaagggagaactcggtcggccgggaccaccg ggacttccgggacccgttggaccgattggccagaagggcgacaggggtcttccaggtctt ccaggagcgccgggtctgaatggcgtcgcaggtccccctggcaaccccggccccgtgggt ctgcccggcggagactacctcatgggcatccttctcgtgaggcatagccagtcgtccacc gtgcccacttgcttcaacggaatgacgcagctgtgggacggctactcgctgctttacatc gagggcaacgagaaatctcacaaccaagatttgggttacgctggatcctgtctccggagg ttcagcacgatgcctttcttgttctgcgacttcaacagcgtgtgcaactacgccagccga aacgacaagtcctactggctctcgaccaatgccccgattcccatgatgccagtgggtgaa gccactatccagcaatacatcagtcgctgcgtcgtatgcgaggcgccagccaatgtcatc gccgtgcacagtcagtccatgtccattccggagtgtccatcaggcggctggaaccaactg tggattggatacagcttcgccatgcacaccgcagccggtgcagagggcggcggacagtcc ctgtccagccccggctcgtgtctggaggacttccgtgccacgccgttcatcgagtgcaac ggcgcccgtggcacgtgccactactttgccaacaagctgagcttctggctgtccaccatc gagcaggacttccagttcgagcggcccgtcagtgagaccctcaaggctggcaagcttcgt aaccgcgtcagccgctgcgccgtttgtatcaaggactcgaatgtgggcctctaa

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