Ixodes scapularis (black-legged tick): 8038593
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Entry
8038593 CDS
T01131
Name
(RefSeq) pre-mRNA-processing-splicing factor 8
KO
K12856
pre-mRNA-processing factor 8
Organism
isc
Ixodes scapularis (black-legged tick)
Pathway
isc03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
isc00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
8038593
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
isc03041
]
8038593
Spliceosome [BR:
isc03041
]
Complex B
U4/U6.U5 tri-snRNP components
U5 snRNP specific factors
8038593
Complex C
U5 SnRNP specific factors
8038593
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PROCN
PRP8_domainIV
U6-snRNA_bdg
PRO8NT
U5_2-snRNA_bdg
PROCT
RRM_4
JAB
Motif
Other DBs
NCBI-GeneID:
8038593
NCBI-ProteinID:
XP_040071735
LinkDB
All DBs
Position
Unknown
AA seq
2368 aa
AA seq
DB search
MALPPYMLGPPYVMGVLAQQQAVAAQLAAQVHAHMHQQQLQQQQQQQQQMHQRQQELMSE
EKLQEKARKWQQLQSKRYAEKRKFGFVDAQKEDMPPEHIRKIIRDHGDMSSRKYRHDKRV
YLGALKYMPHAVLKLMENMPMPWEQIRDVRVLYHITGAITFVNEIPWVIEAVYIAQWGSM
WIMMRREKRDRRHFKRMRFPPFDDEEPPLDYADNVLDVEPLEAIQMDLDHEEDSPVCKWF
YDHKPLAESKHLNGVTYRHWQLTLPQMATLYRLANQLLTDLVDDNYFYLFDLKSFFTAKA
LNMSIPGGPKFEPLIKDMNPADEDWNEFNDINKIIIRQPIRTEYRIAFPYLYNNMPHYVH
LSWYHTPNVVYIKTEDPDLPAFYFDPLINPIAHRHSTKQVADPLPDDDEEFELPEHVQPF
LQDCPLYTDNTANGIALLWAPRPYNLRSDRTRRAIDIPLVKSWYREHCPPGMPVKVRVSY
QKLLKYFVLNALKHRPPKPQKKRYLFRSFKSTKFFQTTTIDWVEAGLQVCRQGYNMLNLL
IHRKNLNYLHLDYNFNLKPVKTLTTKERKKSRFGNAFHLCREILRLTKLVVDSHVQYRLN
NVDAFQLADGLQYIFAHVGQLTGMYRYKYKLMRQIRMCKDLKHLIYYRFNTGPVGKGPGC
GIWAPGWRVWLFFMRGITPLLERWLGNLLSRQFEGRHSKGVAKTVTKQRVESHFDLELRA
SVMHDILDMMPEGIKQNKARTILQHLSEAWRCWKANIPWKVPGLPIPIENMILRYVKMKA
DWWTNTAHYNRERIRRGATVDKTVCKKNLGRLTRLYLKAEQERQHNYLKDGPYISAEEAV
AIYTTTVHWLESRRFSPIPFPPLSYKHDTKLLILALERLKEAYSVKSRLNQSQREELGLI
EQAYDNPHEALSRIKRHLLTQRAFKEVGIEFMDLYSHLIPVYDVEPLEKITDAYLDQYLW
YEADKRRLFPPWIKPADSEPPPLLVYKWCQGINNLQDVWDTSEGECNVMLESRFEKMYEK
IDLTLLNRLLRLIVDHNIADYMTAKNNVIINYKDMNHTNSYGIIRGLQFSSFIVQYYGLV
LDLLGLGLQRASEMAGPPQMPNDFLSFQDVATETAHPVRLYSRYIDRIHVFFRFTAEEAR
DLIQRYLTEHPDPNNENIVGYNNKKCWPRDARMRLMKHDVNLGRAVFWDIKNRLPRSVTT
VQWESSFVSVYSKDNPNLLFNMGGFECRILPKCRMTHEEFSHKDGVWNLQNEVTKERTAQ
CFLRVDDESMQRFHNRVRQILMASGSTTFTKIVNKWNTALIGLMTYFREAVVNTQELLDL
LVKCENKIQTRIKIGLNSKMPSRFPPVVFYTPKELGGLGMLSMGHVLIPQSDLRWSKQTD
VGITHFRSGMSHDEDQVIPNLYRYIQPWESEFIDSQRVWAEYALKRQEALAQNRRLTLED
LEDSWDRGIPRINTLFQKDRHTLAYDKGWRVRTDFKQYQVLKQNPFWWTHQRHDGKLWNL
NNYRTDMIQALGGVEGILEHTLFKGTYFPTWEGLFWEKASGFEESMKYKKLTNAQRSGLN
QIPNRRFTLWWSPTINRANVYVGFQVQLDLTGIFMHGKIPTLKISLIQIFRAHLWQKVHE
SIVMDLCQVFDQELDALEIETVQKETIHPRKSYKMNSSCADVLLFATYKWNVSRPSLLAD
SKDTMDGTTTQKYWMDVQLRWGDYDSHDVERYARAKFLDYTTDNMSIYPSPTGVLIAIDL
AYNLHSAYGNWYPGCKPLIQQAMAKMMKANPALYVLRERIRKGLQLYSSEPTEPYLSSQN
YGELFSNQIIWFVDDTNVYRVTIHKTFEGNLTTKPINGAIFIFNPRTGQLFLKIIHTSVW
AGQKRLGQLAKWKTAEEVAALIRSLPVEEQPKQIIVTRKGMLDPLEVHLLDFPNIVIKGS
ELQLPFQACLKVEKFGDLILKATEPQMVLFNLYDDWLKTISSYTAFSRLILILRALHVNN
ERTKVILKPDKTTITEPHHIWPTLTDDEWIKVEVQLKDLILADYGKKNNVNVASLTQSEI
RDIILGMEISAPSAQRQQIAEIEKQTKEQSQLTATTTRTVNKHGDEIITSTTSNYETQSF
ASKTEWRVRAISATNLHLRTNHIYVSSDDIKEAGYTYILPKNILKKFIIISDLRTQIAGY
LYGASPVDNPQVKEIRCIVVGPQCGTHQGVQLPQGLPQHEHLRELEPLGWIHTQPNELPQ
LSPQDVSAHARIMADNPSWDGEKTVIITCSFTPGSCSLTAYKLTPSGYEWGRQNTDRGNN
PKGYLPSHYERVQMLLSDRFLGFFMVPAQGPWNYNFMGVRHDPNMKYELQLANPKEFYHE
IHRPSHFLNFSSLEEPDFIGMDREDLYA
NT seq
7107 nt
NT seq
+upstream
nt +downstream
nt
atggccctcccgccgtacatgctgggccccccctacgtcatgggggtgcttgcccagcag
caggccgtggcagcccagctggctgctcaggtccacgctcacatgcatcagcagcaactg
caacaacagcagcagcaacagcagcagatgcaccagcgacagcaggagctcatgtcggag
gagaaactccaggagaaagcccgcaagtggcagcaactgcagtcaaagcggtatgcagag
aagcggaagttcggctttgtagatgcccagaaagaggacatgccccctgagcacatccgc
aagatcatccgtgaccatggagacatgagcagccgcaaataccgtcatgacaagagggtc
tacctgggtgccctgaagtacatgccccatgcggtgctgaagctcatggagaacatgccc
atgccctgggagcagatccgggatgtgcgggtgctgtaccacatcaccggagccatcaca
tttgtcaacgagattccctgggtcattgaggctgtgtacattgcccagtgggggtcgatg
tggatcatgatgcgccgggagaagcgtgaccggcggcacttcaagcgtatgcgcttccca
cccttcgacgacgaagagccgcccctggactatgcggacaatgtactggacgtggagccc
ctggaggccatccagatggacctggaccacgaggaggactcgcccgtctgcaagtggttc
tacgaccacaaacccctggccgagagcaagcacctgaacggggtgacgtaccggcactgg
cagctgacactgccccagatggcaacactgtaccggctggccaaccagctgctcacggac
ctggtggacgacaattacttttacttgttcgacctcaagtccttcttcacggccaaggcc
ctcaacatgtccatcccggggggacccaagttcgagcccctcatcaaggacatgaacccg
gcggatgaggactggaacgagttcaacgacatcaacaagatcatcatccggcaaccgatc
cggacggagtacaggattgcctttccctacctgtacaacaacatgcctcactacgtgcac
ctctcttggtaccacacccccaacgtggtgtacatcaagacggaggatccggatctgccg
gccttctactttgatcctctgatcaaccctattgcacatcgccacagcacaaagcaagtg
gccgatccgctgccggacgatgacgaggagtttgagctcccggagcacgtgcagccgttc
ctccaggactgcccgctgtacactgacaacacggccaacggcatcgccctgctctgggcg
ccccggccctacaacctgcgctcagaccgcacccgccgggccatcgacattccgctcgtc
aagtcctggtaccgcgagcactgccctcctggcatgccagtgaaggtgcgggtgtcttac
cagaagctcctcaagtactttgttctgaatgccctcaagcacaggccacccaagcctcaa
aagaagaggtacctgttccggtccttcaagtcgaccaagttcttccagacgaccaccatc
gactgggtagaggcgggccttcaggtgtgcaggcagggctacaacatgctcaacctgctc
atccaccgcaagaacctcaactacctccacctggactacaacttcaacctcaagccggtt
aagaccctgaccaccaaggagaggaaaaagtcccgcttcggcaacgccttccacctgtgc
cgggagatcctgcggctgacaaagctggttgtggacagccacgtccagtaccggctgaac
aacgtggatgccttccagctggccgacgggctccagtacatcttcgcccacgtcggccag
ctcacgggcatgtaccgctacaagtacaagctcatgcgccagattcgcatgtgcaaggac
ctcaagcacctgatctactaccgcttcaacactggccccgtgggcaagggccctggctgc
gggatctgggcccccggctggcgggtgtggctcttcttcatgcggggcatcacccccctg
ctggagcgctggctgggcaacctgctgtccaggcagttcgagggacgccactccaagggc
gttgccaagacggtcaccaagcagcgcgtcgagagccactttgacctcgagctgagggcc
tcggtgatgcacgacatcctggacatgatgccagagggcatcaagcagaacaaggcccgc
accatcctgcagcacctcagcgaggcctggaggtgctggaaggccaacatcccctggaag
gtgcctgggctgcccatccccattgagaacatgatcctgcgctacgtgaagatgaaggca
gactggtggaccaacacagcccactacaaccgggagcgtatccgcaggggggccacggtg
gacaagacggtgtgcaagaagaacctggggcgcctcacccggctctatctcaaggccgag
caggagaggcagcacaactacctcaaggacggtccgtacatcagtgcggaggaggcggtg
gctatctacacgacaacggtgcactggctggagagccgccggttctcccccatcccgttc
ccaccgctctcctacaagcacgacactaagctgctcatcctggcactggaaaggctgaag
gaggcctacagcgtgaagagccgcctgaaccagtcccagcgagaagaactgggactcatt
gagcaggcatacgacaacccccatgaggcgctttctcgcatcaagcgtcatctgctcacc
cagagagccttcaaagaggtgggcatagagttcatggacctgtacagccacctgatccca
gtgtacgacgtggaacccctggagaagatcacggacgcctacctggatcagtacctgtgg
tacgaggcggacaagcggcgcctcttcccaccgtggatcaagccagccgactccgagccc
ccacccctgctcgtgtacaagtggtgccaaggcatcaacaacctgcaggatgtgtgggac
acttcggaaggggagtgcaacgtgatgctcgagtcccgctttgagaagatgtacgagaag
atcgatctgacgctgctcaaccgactgctgcgtctcatcgtggaccacaacattgccgac
tacatgactgccaagaacaacgtcatcatcaactacaaggacatgaaccacaccaactct
tatggcatcatccggggcctgcagttctcgtcgttcatagtgcagtactatggcctggtg
ctggacctgctggggctgggcctgcagcgggcctccgagatggcggggcccccccagatg
cccaacgacttcctgtccttccaggacgtggccaccgagaccgcccaccctgtgcgcctc
tactcgcgctacatcgaccgcatacatgtcttcttcagattcacggctgaggaggctaga
gacctgatccaacgctacctgacggagcatccggaccccaacaatgagaacattgtgggc
tacaacaacaagaagtgctggcccagggacgcccgcatgcggcttatgaagcacgacgtc
aacctggggcgtgcggtgttctgggacatcaagaaccgactgccccgctccgtgacgacg
gtgcaatgggagagcagctttgtgtcggtgtacagcaaggacaaccccaacttgctcttc
aacatggggggctttgagtgccgcatcttgcccaagtgccgcatgacccacgaagagttc
agccacaaggatggcgtctggaacctgcagaacgaggtgaccaaagagaggactgcccag
tgtttcctcagggtggacgacgagtccatgcagaggttccacaaccgggtcaggcagatc
ctcatggcctctggctcaaccaccttcaccaagattgtgaacaagtggaacactgccctg
atcgggctgatgacatacttccgcgaagcggtggtgaacacccaggagctgctggacctg
ctggtgaagtgtgagaacaagatccagacccggatcaagattggcctcaactccaagatg
cccagtcgcttcccgcccgtggtcttctacacccccaaggagctgggaggcctgggcatg
ctgtccatgggacacgtgctcatcccacagtcggacctcaggtggtccaagcagacggac
gtgggcatcacccacttccggtcgggcatgagccacgacgaggaccaggtgatccctaac
ctgtaccgctacatccagccctgggagagcgagttcatcgactcccagagggtctgggca
gagtacgccctaaagcggcaggaggccctcgcccagaacaggcgcctcacccttgaagac
ctggaggacagctgggaccggggcatccctcgcatcaacacactgttccagaaggacagg
cacaccctggcctacgacaaggggtggcgcgtgcgcacagacttcaagcagtaccaggtg
ctgaagcagaacccattctggtggacccaccagcggcacgacgggaagctgtggaacctg
aacaactaccggacggacatgatccaggccctgggaggggtggagggcatcctggagcac
accctcttcaagggcacctacttccccacctgggagggactcttctgggagaaagcgagt
gggtttgaagagtccatgaagtacaagaagctgaccaatgcccagaggtctggcctgaac
cagatccccaaccgacgcttcaccctctggtggtctcccaccatcaacagggccaatgtc
tacgtcggtttccaggtgcagctggatctgacgggcatcttcatgcacggcaagatcccc
acactgaagatctccctcatccagatcttccgtgcccatctctggcagaaggtccacgag
agcatcgtcatggacctgtgccaggtgtttgaccaagagctcgacgccctggagattgag
actgtccagaaagagaccatccatcccaggaagtcgtacaagatgaacagctcgtgcgca
gacgtcctcctctttgccacctacaagtggaacgtgtcccggccatccctcctggctgac
tccaaagacacaatggacggcacgacgacgcagaagtattggatggacgtgcagctgcgg
tggggcgactacgactcccacgacgtggagcgctacgcccgggccaagttcctggactac
accacggacaacatgagcatctacccatcgcccacgggcgtgctcattgccatcgacctg
gcctacaacctgcacagtgcatacggcaactggtaccccggctgcaagcccctgatccag
caggccatggccaagatgatgaaggccaaccccgccctgtatgtgctgcgcgagcgcatc
cgcaaggggctgcagctgtactcctcggagcccaccgagccctacctgtcgtcccagaac
tacggggagctcttctccaaccagatcatctggttcgtggacgacacaaacgtctacaga
gtcaccatccacaagacatttgaaggtaacctgacgaccaagcccatcaacggggccatc
ttcatcttcaaccctcgcacgggtcagctgttcttgaagatcatccacacgtcagtctgg
gcaggacagaagcgtcttggtcagctggccaagtggaaaacagctgaggaggtagcagcc
ctgattcgttccctgcccgtggaggagcagcccaagcagatcattgtcaccaggaagggc
atgctcgatccactggaggtgcacttgttggacttccccaacattgtgataaagggcagt
gagctgcagctgcccttccaagcctgcctgaaggtggagaagtttggagacctcatcttg
aaggccaccgaaccgcagatggtgctcttcaacctctacgacgactggctcaagaccatc
tcctcatacaccgcgttctcccggctgatcctgatcttgcgtgccctgcacgtgaacaac
gagcggaccaaggtgatcctgaagccagacaagacaaccatcacggagccccaccacatc
tggcccaccctgacggacgatgagtggatcaaggtggaggtgcagctcaaggacctgatc
ctggccgactacggcaagaagaacaacgtcaatgtggcgtccctgacgcaatccgagatc
cgggacatcatcctgggcatggagatctctgccccgtcggcccagcggcagcagattgcc
gagattgagaagcagaccaaggagcagtcccagctgaccgccaccaccacccgcaccgtc
aacaagcacggcgacgagatcatcacctccaccaccagcaactacgagacgcagtcgttt
gcctccaagacagagtggcgcgtgcgtgccatctcggccaccaacctgcacctccgcacc
aaccacatctatgtgtcgtcggacgacatcaaggaggctgggtacacctacatcctcccc
aagaacatcctcaagaagttcatcatcatctccgacctcaggactcagatagcgggctac
ctgtacggggccagccccgtggacaacccccaggtgaaggagatccgctgcatcgtggtg
ggaccccaatgtggcacccaccaaggggtgcagctgccccaaggcctgccccagcatgag
cacctacgggagctcgaacccctgggctggatccacacccagccgaacgagctgccccag
ctgtccccacaggacgtgagcgcccatgcccgcatcatggccgacaacccctcctgggac
ggcgagaagactgttatcatcacctgcagtttcacgccaggctcatgctctctgacggct
tacaagctcaccccgagcggctacgagtggggccgccagaacacggaccgtggcaacaac
cccaaggggtacctgccctcgcactacgagcgcgtccagatgctgctctcggaccgcttc
ctgggattcttcatggtgcctgcccaggggccctggaactacaacttcatgggtgtgcgt
cacgacccgaacatgaagtatgagctgcagttagccaatcccaaggagttctaccacgag
atccatcgtccgtcgcacttcctcaacttcagcagcctggaggagccagacttcatcggc
atggaccgagaggacctctacgcttaa
DBGET
integrated database retrieval system
