KEGG   Ixodes scapularis (black-legged tick): 8039799
Entry
8039799           CDS       T01131                                 
Name
(RefSeq) transcription initiation factor TFIID subunit 5
  KO
K03130  transcription initiation factor TFIID subunit 5
Organism
isc  Ixodes scapularis (black-legged tick)
Pathway
isc03022  Basal transcription factors
Brite
KEGG Orthology (KO) [BR:isc00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    8039799
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:isc03021]
    8039799
   03036 Chromosome and associated proteins [BR:isc03036]
    8039799
Transcription machinery [BR:isc03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIID
     8039799
   Coactivators
    SAGA/TFTC/STAGA complex
     8039799
Chromosome and associated proteins [BR:isc03036]
 Eukaryotic type
  Histone modification proteins
   HAT complexes
    PCAF complex
     8039799
    STAGA complex
     8039799
    TFTC complex
     8039799
    SAGA complex
     8039799
    SLIK complex
     8039799
SSDB
Motif
Pfam: WD40_Prp19 WD40 Beta-prop_WDR5 Beta-prop_WDR3_1st Beta-prop_THOC3 TFIID_NTD2 WD40_CDC20-Fz Beta-prop_WDR3_2nd Beta-prop_WDR36-Utp21_2nd WD40_WDHD1_1st Beta-prop_CAF1B_HIR1 WD40_Gbeta EIF3I Beta-prop_EML_2 WD40_MABP1-WDR62_2nd Beta-prop_TEP1_2nd Beta-prop_EML WDR55 Beta-prop_WDR90_POC16_2nd WD40_MABP1-WDR62_1st Beta-prop_WDR36-Utp21_1st Beta-prop_IFT122_1st Beta-prop_VPS8 Beta-prop_SCAP NBCH_WD40 WDR90_beta-prop_4th Beta-prop_WDR75_1st ANAPC4_WD40 Beta-prop_DCAF4 Beta-prop_WDR41 Beta-prop_Aladin Beta-prop_TEP1_C Beta-prop_EIPR1 Beta-prop_RIG_2nd WD40_RFWD3 Beta-prop_IFT140_1st Beta-prop_WDR19_1st Beta-prop_SPT8 WD_LRWD1 Beta-prop_HPS5 Beta-prop_Vps41 RMC1_N Beta-prop_Nup120_160 Tricorn_2nd Beta-prop_LRRK2
Other DBs
NCBI-GeneID: 8039799
NCBI-ProteinID: XP_002413739
UniProt: B7QDX5
LinkDB
Position
Unknown
AA seq 690 aa
MAESVVDGSVPVVISNGNAATPAPAPTPDSVTSEKDEDSELNLDKNSLLAVLKFLKKNKL
QETELILRKEAKILGDNNLQEDVQASSDVSSVLSTYKSEGDPDIYEDTYTVFKRFVESSL
DSYRHELAMILYPAFVHMYLELVYNEHEEQAVKFMERFGPEQEEYYQEDVKRLSCLTKKD
HMKGNEFMDNFRSGQFTVRMSRDTYNFLKRHLQDKKNTVLQNIIQEHLYLDVYEGIARMK
PQLDATAGAFLGEAARQANKVKVYYGLLKEPELHIPLDEDDDGGDGEDKPKKKKPKKDPL
LSKKARNDPNAPPNNRIPLPELRDADKLDKISAMKEAIKRVKLGPDSLPSICFYTFLNSH
LGVTVAEISEDSTLLAAGFGDSLIRVWSLTPNKLKGMKSAHDLETIDKEADDVLYRMMDE
RSGVEMRVLMGHSGPVTAVSFSPDHTYLLSSSEDSTIRLWSLLTWTNVVCYKGHCFPIWD
VKFSPHGFYFASCGHDRTARLWSTDSYQPLRIFSGHVSDIDCIQFHHNSNYVATGSSDRT
VRLWDVLTGSCVRYMTGHKGRIYCLQFSNDGRFLTSGGADCKILLWDVAHGHLLAELAGH
TDTIYCLCFSRDATLLASGGIDNCIKLWDFTRLLDEIDLEELNISHAPTVRTNSDGLLLG
SYPTKATSVLALHFTRRNLLLASGMYQSGS
NT seq 2073 nt   +upstreamnt  +downstreamnt
atggcggaatccgtggtggacgggtccgttcccgtcgtgataagtaacggcaacgcggcg
actcccgcgcccgccccgactcccgattcggtcacgtccgaaaaggacgaagacagcgag
ctcaacctggataagaactctctgctggctgtcctgaagttcctcaaaaagaacaagctc
caggagaccgagctcatactccgcaaagaagccaagatcctcggagacaacaaccttcaa
gaggacgtgcaggcgagttcggacgtgagtagcgtcctctcgacgtacaaaagcgaaggc
gacccggacatctacgaagacacgtacacggtgtttaagcgcttcgttgaatcgtcgctg
gactcgtaccgccacgaactcgccatgatcctctacccggctttcgttcacatgtacctg
gagctggtctacaacgagcacgaggaacaggccgtcaagttcatggaacgcttcgggccc
gagcaggaagagtactaccaggaggacgtcaaacgcctctcgtgcctcaccaagaaagat
cacatgaagggtaacgagttcatggacaacttccgatcgggacagtttacagttcgaatg
tcccgcgacacgtacaacttcctcaagcggcacctccaggacaagaagaacactgtcctt
caaaatattatccaggaacacctgtacctcgatgtctacgaaggaatcgcgcggatgaaa
ccccagcttgacgctacggccggtgcgttcctgggggaggcggctcggcaagcgaataag
gtcaaagtctactacgggctcctcaaagaacccgaactacatattccgctcgacgaagac
gacgacggcggtgacggagaggacaagccgaagaaaaagaagcccaaaaaggaccctctt
ctgtctaagaaggcgcgcaacgaccccaacgcgccccccaacaatcggattcccttgccc
gagctcagggacgctgacaagttggacaagatcagcgccatgaaggaggccatcaagagg
gtcaagctgggcccggacagtctcccttccatctgcttctatacttttctcaacagccac
ttgggggttacggtggccgagatatcggaggacagtacccttcttgcggcagggtttggg
gactctctgataagggtgtggagcctgacccctaacaaactgaaggggatgaagtctgcg
cacgacctggagacaattgacaaggaagcggatgacgtcctgtacaggatgatggacgag
cgcagcggcgtggagatgcgtgtcctgatgggccacagcggcccggtgacggcggtcagc
tttagccccgaccacacatacctcctgtcctcttccgaggactccaccattcggctctgg
agcctgctgacgtggacgaacgtcgtgtgctacaagggccactgcttccccatctgggac
gtcaagtttagcccgcacggcttctacttcgcttcgtgtggtcacgaccggacggcccgg
ttgtggtcgacggactcctatcagcccctacgaatcttttctggtcacgtctccgacatt
gactgcatccagttccaccacaactctaactacgtggcgaccgggtcgagcgaccggacg
gtgcgcctctgggatgtcctgacaggcagctgcgtccgctacatgacgggccacaagggc
cgcatctactgcctccagtttagcaacgacggtcgcttcctcacgtcgggtggtgccgac
tgcaagatcctcctctgggacgtggcccatgggcacctcctggccgaacttgcagggcac
acagacaccatctactgcctctgcttcagtcgagacgcgacgctcctggcatccggaggc
atcgacaactgcatcaagctctgggacttcaccaggctcctggacgagattgacctggaa
gaactcaacatctcacacgcgcccaccgtccggaccaactcggacggtctgctgctcggc
tcgtacccaaccaaggcgacctcagtgctggcgttgcacttcacgagacggaacttgctg
ctggcttcggggatgtaccagagtgggtcttga

DBGET integrated database retrieval system