Ixodes scapularis (black-legged tick): 8040158
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Entry
8040158 CDS
T01131
Name
(RefSeq) eukaryotic initiation factor 4A-III
KO
K13025
ATP-dependent RNA helicase [EC:
5.6.2.7
]
Organism
isc
Ixodes scapularis (black-legged tick)
Pathway
isc03013
Nucleocytoplasmic transport
isc03015
mRNA surveillance pathway
isc03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
isc00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
8040158
09122 Translation
03013 Nucleocytoplasmic transport
8040158
03015 mRNA surveillance pathway
8040158
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
isc03019
]
8040158
03041 Spliceosome [BR:
isc03041
]
8040158
03009 Ribosome biogenesis [BR:
isc03009
]
8040158
03012 Translation factors [BR:
isc03012
]
8040158
Enzymes [BR:
isc01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
8040158
Messenger RNA biogenesis [BR:
isc03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
8040158
mRNA cycle factors
Stress granule specific factors
8040158
Spliceosome [BR:
isc03041
]
Complex C
Other components
EJC/TREX
8040158
Ribosome biogenesis [BR:
isc03009
]
Eukaryotic type
90S particles
Helicases
8040158
Translation factors [BR:
isc03012
]
Eukaryotic type
Initiation factors
eIF-4
8040158
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_19
AAA_22
AAA_30
Motif
Other DBs
NCBI-GeneID:
8040158
NCBI-ProteinID:
XP_002414033
UniProt:
B7QER9
LinkDB
All DBs
Position
Unknown
AA seq
402 aa
AA seq
DB search
MASTRRRVVQTEDLSNVEFETSEDVEVIPTFDAIGLREDLLRGIYAYGFEKPSAIQQRSI
KPVIKGRDVIAQAQSGTGKTATFSIGVLQTIDTQMRETQALILSPTRELAGQIQKVILAL
GDYMNVQCHSCIGGTNLGEDIRKLDYGQHIVSGTPGRVFDMIKRRNLRTRSIKMLVLDEA
DEMLNKGFKEQIYDVYRYLPPCTQVVLISATLPHEILEMTSKFMTDPVRILVKRDELTLE
GIKQFFVAVEREEWKFDTLCDLYDTLTITQAVIFCNTKRKVDWLSEKMREANFTVSSMHG
DMPQKERDAIMKEFRSGSSRVLITTDIWARGIDVQQVSLVINYDLPNNRELYIHRIGRSG
RFGRKGVAINFVKNDDIRILRDIEQYYSTQIDEMPMNVADLI
NT seq
1209 nt
NT seq
+upstream
nt +downstream
nt
atggcgtcgactcgtaggcgcgttgtgcagaccgaggatttatcgaacgtagagtttgaa
accagcgaagatgtggaagtcatcccgacattcgacgcaatcggactcagagaagacctt
cttcgtggaatttatgcctacgggttcgagaagccgtcagccatccagcagcgctccatc
aagcccgtcatcaagggacgagacgtgattgcccaggcccagtccgggacgggcaagacg
gccaccttctccatcggcgtgctgcagaccatcgacacccagatgcgggagacccaggcg
ctgatactctctcccaccagggagctggccggacagatccagaaggtgatcctggcgctg
ggcgactacatgaacgtccagtgccactcgtgcattgggggcaccaacctgggggaggac
atccgcaagctggactatgggcagcacatcgtgtctggaacgccaggacgtgtcttcgac
atgatcaagaggaggaatctgcgcacccgttccatcaagatgctggtactcgatgaagcc
gacgaaatgctcaacaagggcttcaaggagcagatctacgacgtgtaccggtacctgccc
ccgtgcacccaggtggtgctcatctcggccaccctgccccacgagatcctcgagatgacc
agcaagttcatgacggaccctgtgcgcatcctcgtcaagcgtgatgagctgaccctggag
ggcatcaagcagttctttgtggcggtcgagagggaggagtggaagtttgacaccctgtgc
gacctgtacgacaccctcaccatcacccaggccgtcatcttctgcaacaccaagaggaag
gtggactggctgagcgagaagatgcgcgaggccaacttcacggtgtcctcgatgcacggc
gacatgccccaaaaggagagggacgccatcatgaaggagttccgctcgggctccagccgg
gtcttgatcacgacggacatctgggccaggggcatcgacgtccagcaggtgtctctggtc
atcaactacgaccttcccaacaaccgagagttgtacatccacagaatcggccgttcggga
cgttttggacgcaagggcgtggccatcaactttgtgaagaacgacgacatccgcatcctg
cgtgacattgagcagtactacagtacccagatcgacgagatgcccatgaacgttgctgac
ctcatctag
DBGET
integrated database retrieval system
