Ixodes scapularis (black-legged tick): 8040318
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Entry
8040318 CDS
T01131
Name
(RefSeq) U6 snRNA-associated Sm-like protein LSm2
KO
K12621
U6 snRNA-associated Sm-like protein LSm2
Organism
isc
Ixodes scapularis (black-legged tick)
Pathway
isc03018
RNA degradation
isc03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
isc00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
8040318
09123 Folding, sorting and degradation
03018 RNA degradation
8040318
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
isc03019
]
8040318
03041 Spliceosome [BR:
isc03041
]
8040318
Messenger RNA biogenesis [BR:
isc03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
8040318
mRNA degradation factors
5'-3' decay
Lsm complex
8040318
Spliceosome [BR:
isc03041
]
Complex B
U4/U6.U5 tri-snRNP components
LSm proteins
8040318
Complex C
U2 snRNP components
8040318
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LSM
SM-ATX
Phage_HP1_Orf24
DYW_deaminase
Motif
Other DBs
NCBI-GeneID:
8040318
NCBI-ProteinID:
XP_002414155
UniProt:
A0ACM8DKK6
LinkDB
All DBs
Position
Unknown
AA seq
96 aa
AA seq
DB search
MLFYSFFKSLVGKDVVVELKNDLSICGTLHSVDQYLNIKLTDINVTDTEKYPHMLSVKNC
FIRGSVVRYVQLPADEVDTQLLQDAARKEASSQSKP
NT seq
291 nt
NT seq
+upstream
nt +downstream
nt
atgctattctattcgttcttcaagtcgttggtcggaaaggatgtcgtggtggagctgaaa
aacgatctgagtatatgtggaacactacattcggtggaccagtatctaaacatcaaactc
acggacatcaacgtgacagacacagaaaagtatccgcacatgctgtccgtcaagaactgc
ttcattcgtggttcggtggtccgttacgtccaactgcctgccgacgaagtggacacgcag
ctccttcaggatgctgcgaggaaagaggcctcctcgcagagcaagccctaa
DBGET
integrated database retrieval system
