Ixodes scapularis (black-legged tick): 8040860
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Entry
8040860 CDS
T01131
Name
(RefSeq) voltage-dependent T-type calcium channel subunit alpha-1H
Organism
isc
Ixodes scapularis (black-legged tick)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ion_trans
PKD_channel
Motif
Other DBs
NCBI-GeneID:
8040860
NCBI-ProteinID:
XP_029834281
LinkDB
All DBs
Position
Unknown
AA seq
2266 aa
AA seq
DB search
MLVILLNCVTLGMYQPCADNECQSARCRLLQVFDDLIFAFFALEMCIKVLAMGFMGKNAY
LAEAWNRLDFFIVVAGALEYVLDVGNINLSAIRTIRVLRPLRAINRIPSMRILVMLLLDT
LPMLGNVLLLCFFVFFIFGIVGVQLWAGLLRQRCYLVLPDDNVSIPSPISSYYQGVDAER
DFICSTEKDNGMHRCSGLPPLVLTTGLVCNASALPHSDNVPTNASCVNWNQYYSNCTAGD
KNPFQGSISFDNIGLAWVAIFLVISLEGWSDIMYYVQDAHSFWDWIYFVLLIVIGSFFMI
NLCLVVIATQFSETKKREMERMRMERARYHSSSTLASTSVSDSGCYTQIIKYLTHLGRRA
KRRFLRWYRRRKRRRARRAIAQATPAAVEATAGSPISLRHQPSTPRRPTPPRTGDIHHSD
RSESQSSDSSGSSPAESKTSLPDLGPVAAVASEGTTERCRMLELPPRASPEASDVEVGAS
PRRPSCLRIASRTGLSNPQGPDTTAALPERPALGRGPCGPKTVSLQAPAPPTPSDELVAH
PGSASGSSSSPLPTTTAGAGATLTCAELLAFSGAQSAALAASFASNFAMHRFYSTLGKGT
KHYSAPQLTFHSHGSSRRRRRHPQPVDSPPSTSPSSSSSTSSSCSGAHSDSSSCGEEEDD
GEESWYSEYEDELSGSGSGPPRGRARGPCCRFWRARQVQLRRLVGHQYFQRGILTAILVN
TLSMGIEYHDQPHELTQAVEISNLIFTGIFGLEMLLKILAEGFLSYISSGFNLFDGVIVI
LSIVELTQSSGSGLSVLRTFRLLRILKLVRFMPALRRQLFIMLRTMDNVAVFFALLILFI
FIFSVLGMNLFGCKFCVKEPDGTVQCDRKNFDSLLWALVTVFQILTQEDWNVVLFNGMEK
TSPWAALYFVALMTFGNYVLFNLLVAILVEGFSAEGDRKKSLEALKDTADIDADGNQKYA
SQDAEDDPKDNIMKETRMLSQPACGCKTDAAEEPAMALSCIPPIITHTAATPQGSPSATL
EMSLVRDFGHRLSPLTALHLPPPCSSSSSADSGGRSTPSPGAASRLSRTPSDRSTASGAP
AVLGAAPGAAPGSALLHVPRQGGGGGFVRNDGPSPTNGRRRRRSCVSPAPTLTRKGSPPT
PPGSPLIKLHRQGSGASSGSAALRTDSDNDSLLDGYRELSPAPLNNVTAGQSGPSASASD
HSHCNGGMLPNLNNSRQNETTFNNNNNSQPHQHHHHHHHHHHHHHHRVNNHHKRPNVLPK
QNNATATCAEEKQEPSYPQSPTFAGGDAGRMMTSYTPLSRQNSLQSQHSGGGSVIVSRHN
SLSSSGLGYVETRHNSLVTKPGKKINVEGSVLHVKVENAAAAAAALALGDRAVHVPKLCW
FFEPQWWRWCFENRDNHSLFIFPPESKMRIYCNRLTDGRWFDYTVLVFIALNCITLAMER
PNIPPKSLERELLIAANYTFTVVFAFEMLVKVIAKGLWYGDKAYFKSGWNKMDGVLVTIS
LVDFFLTFVADGSPRIFGILRVFRLLRSLRPLRVINRAPGLKLVVQTLMSSLRPIGNIVL
ICCTFFIIFGILGVQLFKGSFYFCEGPDVKGVRTKEDCLERGMMWTNRKYNFDHLGQALM
ALFVLSSKDGWVNIMYSGLDAVGEGIQPVENYNEWRLLYFISFLLLVAFFVLNMFVGVVV
ENFHRCREEQEREERAMRAAKRARKLEKKRRKMREPPYYANYSKPRLFTHNIVTSKYFDL
AIAAVIGLNVVTMAMEFYRMPLELEYALKIFNYFFTAVFLLELSMKVVALGIPRYLTDKW
NQLDILIVILSIMGIVLEEMKSDLIPINPTIIRVMRVLRIARVLKLLKMAKGIRALLDTV
MQALPQVGNLGLLFFLLFFIFAALGVELFGRLECDESHPCQGLGEHAHFHNFGMAFLTLF
RVATGDNWNGIMKDTLRDECDARSDCVRNCCVSAIIAPLYFVVFVLMAQFVLVNVVVAVL
MKHLEESHKQMDDDLDMEAELQEEMEQEERELLQAKNKLVMDAKMELHRPIVKMSSLPAN
FTFYFRDDANGESSSALPVISICIPDDQDSPIRSKASSSSTDSDAAGIDIADIELTTEER
SAASIDDVNIRRASPEDGSTEKVAVADLRALTTDEAYDLPSTSPTPPLDVDEDDEDSETT
STSTSKLRYLLPNYPELSKAIDPDSSESNSWTFSAEFPSSSTSRTAIFAGGDATDEEEDV
QTPTTTTDETTAPVVVVAEDNNGDLVSFRPCLRPSVEDKSDDDGTS
NT seq
6801 nt
NT seq
+upstream
nt +downstream
nt
atgttggtgatcctgctgaactgcgtcaccctgggcatgtaccagccctgtgctgacaac
gagtgtcagtccgccaggtgtcgcctgctacaggtgttcgacgacctgatcttcgccttc
ttcgcgctcgagatgtgcatcaaggtgctcgccatgggcttcatgggcaagaacgcttac
ctcgccgaggcctggaaccgcctcgatttcttcatagtcgtcgccggggctttggagtac
gtcctagacgtggggaacataaacctttcggcaattaggacaattagggtattacgacca
cttagggcaataaataggataccaagtatgcgcatcctggtgatgctgctgctggacacc
ctgcccatgctgggcaacgtcctgctcctgtgtttttttgtcttcttcatcttcggcatc
gtgggcgtccaactgtgggcgggcctgctgcgacagcgatgctatctggtgttgcccgac
gacaatgtgtccattccaagtcccatttcgtcatactaccagggggtggatgcggaaagg
gacttcatctgcagcacggagaaggacaacgggatgcaccggtgcagcggtctgccgccg
ctcgtcctcaccacggggctggtgtgcaacgccagcgccctgccgcacagcgacaacgtg
ccgaccaacgcgtcgtgcgtcaactggaaccagtactacagcaactgcacggcgggggac
aagaaccccttccaggggtccatctccttcgacaatatcggcctggcctgggtcgccatc
tttttggtgattagcctggagggctggtccgacatcatgtactacgtccaggatgcacat
tccttttgggactggatttattttgttttgctcattgtgatcgggtccttcttcatgatc
aacctgtgcctggtagtcatcgcaacgcagttctctgagaccaaaaagcgagagatggag
cgcatgcgtatggaacgcgctcgctaccactccagctccacgctggcgtcgacctccgtc
tcggactcgggctgctacacccagatcatcaagtacctcacgcacctcggccggagggcc
aagcggaggtttttgcgctggtaccggcggcgaaagcgtcgtcgggcacgccgcgccatt
gcccaagcgaccccggcggccgtggaagcgactgccgggtcgcccatctccctgcggcat
cagccgtcgactccccgtcgcccgacgcctccacgcacgggcgacattcaccactcggat
cgcagcgaaagccaatcttcggactcgagcggttcctccccggcggaatcgaagacttcg
ctgccggacctgggccccgtggccgcggtggcttccgagggcactacagagcgctgccga
atgctcgagctccccccgagggccagccccgaagcctcggacgtggaggtgggcgcgtcg
cccaggaggccctcctgtctcaggatagcctctcggaccggtctgtccaacccgcaaggg
ccggacacgacggccgcgctgcccgagcgtccggcgctggggcggggcccctgcggcccc
aagacggtgagcctgcaggcccctgccccgccgacgccttcggacgagctcgtggcccac
cccggctcggccagcggctcctcgtcctcccccctcccgacgaccacggccggtgcaggc
gccacgttgacctgcgcggaattactggccttcagcggggcccagagcgccgcgctggcg
gccagcttcgcaagcaacttcgccatgcaccggttctactcgacactcggcaaaggtacg
aagcattactcggcaccgcagttgacgttccactcccatggctcctcccgtcggcggcgt
cggcaccctcagcccgtcgactctcccccctcgacgtccccgtcttcgtcgtcctcgacg
tcctcgtcgtgttcaggggcccacagcgactcctcctcgtgcggcgaggaagaggacgac
ggggaagagtcgtggtactccgaatacgaggacgagctctcgggaagcgggtcgggtcct
cccagggggcgagcccggggcccctgctgccgcttctggcgagctcggcaggtgcaactc
aggcgcctcgtggggcaccagtacttccagaggggcatcctcactgccatcctcgtcaat
accctcagcatgggcatcgaataccacgatcagccccacgagctgacccaggccgtggaa
atcagcaacctcatctttactggcatcttcggccttgagatgttgctcaagatccttgcg
gagggctttctctcctacatcagtagcggtttcaacctctttgacggagtcatcgttatc
ctcagcatagtggaactgacccagagcagcggaagcgggctctcggtgctgcgaacgttt
cgacttttgcggatcctcaaactggttcgcttcatgccggcgctccggcgccaactcttc
atcatgctgcggacgatggacaacgtagccgtgttcttcgctcttctgatattgtttatt
ttcatctttagcgttctgggcatgaaccttttcggctgcaaattctgtgtcaaggaaccc
gatgggaccgtgcagtgtgatcgcaagaactttgactccctcctctgggcgctagttacc
gtgtttcagatcctcacacaggaggactggaacgtcgtgctcttcaacggcatggagaag
acctctccgtgggcggccctctacttcgtggcgctcatgacattcggaaactatgtcctt
ttcaatcttctcgttgccatcctggtcgagggattctcagctgagggtgaccgcaagaag
agcttggaggccctgaaggacactgcggacatagatgcagacggcaatcaaaagtacgcc
tcacaggacgctgaagatgacccaaaggacaacatcatgaaggaaacgcggatgttgtcc
cagccggcatgcggatgcaagacggacgcggcggaggagccggccatggcgctctcctgc
attcccccgatcatcacacacacggcggccaccccgcagggctctcccagcgccaccctg
gagatgtccctggttcgagatttcggccaccggctctcgcccctcacggcgttgcacctt
cccccgccctgttcctcctcatcctcggccgactccgggggccgctccacgccgtccccc
ggtgcggcgtcgcggctttcgcgaaccccaagcgaccggagcacggcgagcggcgcccct
gcggttcttggagcggcccccggagcggctccgggctccgccctgctccacgtcccgcgc
cagggaggcggcggcggctttgttcgcaacgacggcccgagtcccaccaacggacgcagg
cgacgtcgcagctgcgtgagccccgccccaaccctgacccgcaagggttcccctccgacg
ccccccggaagccccctaatcaaactccaccgccagggaagcggggccagctctggcagc
gcggcgctgcggaccgactccgacaacgactcgctcctggacggataccgggagctgagc
ccagcaccgctcaacaacgtgaccgccggtcagagcggcccaagtgcctcagcctctgac
cacagtcattgcaacggcggaatgctgccgaacctcaacaactctagacagaacgaaacg
actttcaacaacaacaacaacagccagcctcaccaacaccaccatcaccatcatcaccat
caccatcatcatcaccacagggttaacaatcaccacaagcggccaaacgtcctgcccaag
cagaacaacgccactgccacctgcgcggaggagaagcaggaaccgagctacccgcagtcg
ccaacttttgccgggggtgacgccggtcgcatgatgacgtcatatacacccctgagtcgg
cagaactcactgcagagtcaacacagcggtggtggcagtgtcatcgtcagtcgacacaac
tcgctgagcagttccggcctgggctacgtggagaccaggcataactcgctcgtgaccaag
cccggcaagaagattaacgtcgagggcagcgtcctccacgtcaaggtggaaaacgcggca
gcagccgccgcagcgctcgcgctcggagacagggcagtgcacgtgccaaagttatgctgg
ttcttcgaacctcagtggtggaggtggtgcttcgagaaccgggacaaccactcgctattc
atcttcccaccggaaagcaagatgcgcatctactgcaaccgcctgacggacggcaggtgg
ttcgactacacagtcctggtgttcatcgcgctcaactgcatcacgctggccatggagagg
cccaacattccacccaagagcctggagagggaactgctcatcgccgccaactacaccttc
accgtcgtatttgcatttgagatgctagttaaagtgatcgccaagggcctctggtacggg
gacaaggcgtacttcaagagcggctggaacaagatggacggagtgctagttaccatctcc
ctcgtcgactttttcctcaccttcgttgccgatggaagcccgagaatctttggcatcctt
cgtgtcttcaggttgctccgctcgctacggcccctcagggttatcaaccgcgcccccggc
ctcaagttggtcgtccaaaccctcatgtcctctctgaggcccatcggcaacattgtcctc
atctgctgcacgtttttcattattttcggaatccttggcgtccagctcttcaagggctct
ttttacttctgcgaaggccccgacgtaaaaggagtgcgcacgaaggaagactgcctagaa
cggggcatgatgtggacaaaccggaaatacaactttgaccatctgggccaggccctgatg
gcgttgtttgtcctgtcttcgaaagacggctgggtcaatattatgtactctggacttgac
gccgtcggagaaggcatacagcccgtggagaactacaacgagtggcgtctgctgtacttc
atctcgttcctgctgctggtggccttctttgtgctcaacatgtttgtgggcgtggtggtg
gagaacttccaccgctgccgggaggagcaggagcgggaggagagggccatgcgtgctgca
aagagggcccgcaagctggagaagaagcgcaggaaaatgcgggagcccccctactatgcc
aactactccaaaccccgcctgttcacccacaacatcgtgacaagcaaatattttgacctt
gccatcgccgccgtgatcggcctcaacgttgtcaccatggccatggagttctaccggatg
cctctggaacttgagtatgccctgaagatcttcaactacttcttcacggctgtgttcctt
ctggagctctccatgaaagtggtggcactgggcatccccagataccttactgacaagtgg
aaccaactggacatcctgatcgtgatcctgtccatcatgggaatcgtccttgaggagatg
aaatcggacctgatacccatcaatcctaccatcatccgagtcatgcgcgtactgcgtatt
gccagagtgctcaaactgctgaagatggccaagggcatccgtgctttgctggataccgtg
atgcaagcgcttccgcaggtcggaaacctcggccttctcttcttcctcctcttcttcatc
tttgctgcactcggcgtcgagctcttcggccggctggaatgtgacgaaagtcacccctgc
cagggcctcggggagcacgcccacttccacaacttcggaatggccttcctcaccttgttc
agagtcgctacgggtgacaactggaacggcatcatgaaagacacccttcgagacgagtgc
gacgcaaggagcgactgcgtgcgcaactgctgcgtgtctgccatcatcgccccgctctac
ttcgtcgtgttcgtgctcatggcccagtttgtgctggtcaacgtcgtggtggctgtcctc
atgaaacacctggaggagtcccacaagcagatggacgacgacctagacatggaggccgag
ctccaagaggagatggagcaggaagaacgggagctcctacaggccaagaacaagttggtg
atggacgccaagatggagctgcacaggcccatcgtgaaaatgtcatccctgccagccaac
ttcactttctactttcgcgacgacgcaaatggcgaatcttcatcggcgctgcccgtgatt
agcatctgcatcccggacgaccaggacagtccgattcgcagcaaggcgtcatcgtcgtcc
acagattcggacgccgccggaatcgacatcgccgatatcgaattgacgacggaagaaaga
tcagcagcatcgatcgatgacgtgaacatccgccgagcctcgcccgaagacgggtccacc
gagaaggtggccgtggccgacctgcgtgcactcaccaccgacgaagcctacgaccttccg
tcaacgagtccaacaccgccgttggacgtcgacgaagacgacgaagattcagagaccacg
agcacgtccacgtcgaaactgcgctacctccttccgaattaccccgaactcagcaaagcc
atcgaccccgactcgagcgagtccaactcgtggacgttttcggcagagttcccgtcgtcg
tcgacgtcgcggaccgccatatttgctggtggagacgccaccgacgaggaggaggacgtt
cagaccccgaccacgacgacggacgagacgacggcgccggttgtggtagtcgcagaggac
aacaacggagacctggtcagtttccgaccatgtctgcggccatctgtcgaagacaagagc
gatgatgacggaacgtcgtga
DBGET
integrated database retrieval system
