| Entry |
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| Name |
(RefSeq) general transcription and DNA repair factor IIH helicase subunit XPB
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| KO |
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| Organism |
isc Ixodes scapularis (black-legged tick)
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| Pathway |
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| Brite |
KEGG Orthology (KO) [BR:isc00001]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
8040951
09124 Replication and repair
03420 Nucleotide excision repair
8040951
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:isc03021]
8040951
03400 DNA repair and recombination proteins [BR:isc03400]
8040951
Enzymes [BR:isc01000]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
8040951
Transcription machinery [BR:isc03021]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
8040951
DNA repair and recombination proteins [BR:isc03400]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
8040951
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| SSDB |
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| Motif |
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| Other DBs |
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| LinkDB |
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| Position |
Unknown
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| AA seq |
782 aa
MGKTKGSRGTKKWRKKADIEEATEDLYGEDDGNGDGVPAAASQKLSEASVEDEFGAKDYR
SQMQLRPDHSSRPLWVAADGHVFLEAFSPVYKHAHDFLIAISEPVCRPHHIHEYKLTSYS
LYAAVSVGLQTQDIIEYLRRLSKTSIPDGIIEFIKLCTVSYGKVKLVLKHNRYFVESPFP
EVLQKLLKDPVIQSCRLRRDVDNELEVGVVSQDVPNAILNAKTLQGATDKNEADANGQKA
VPVPDDITAYYEKMEKDEDDIEDTQTVSFEVNQDHIEVLQKRCIELEYPLLAEYDFKNDT
VNPDIHVDLKPSAILRPYQEKSLRKMFGNGRGRSGVIVLPCGAGKSLVGVTACCTVRKRC
LVLCNSGVSVEQWKAQFKMWSTADDSVICRFTSEAKDKPMGCGICITTYSMITHTQRRSW
EAEQVMSWLKEQEWGLMLLDEVHTIPAKMFRRVLTIVQAHCKLGLTATLVREDDKIQDLN
FLIGPKLYEANWLELQNHGYIAKVQCAEVWCPMTPEFYREYLSARSCKKLLLFVMNPNKF
RACQFLVKFHERRNDKIIVFSDNVFALKHYAIKMNRPYIYGPTSQQERMQILQNFKYNPK
VNTIFVSKVADTSFDLPEANVLIQVSAHGGSRRQEAQRLGRILRAKKSAIAEEYNAFFYS
LVSEDTMEMHYSRKRQRFLVNQGYSYKVITKMEGMDEEDLAYRTKEEQTNLLQQVLAAND
ADAEEERVAGETSTAGQRFQMSRRAGNMSSMSGADSAVYLEYRMGKKDLGLRHPLFKRFR
KT |
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| NT seq |
2349 nt +upstreamnt +downstreamnt
atggggaagaccaagggtagccgtggcacgaaaaagtggaggaaaaaggcggatatcgaa
gaagccactgaagatctgtacggcgaagacgacgggaacggagatggagtgccggcggcg
gccagtcagaaactcagcgaggcgtcggtggaggacgaatttggggcaaaggactatcgc
tcacaaatgcaactcagaccggatcactcgtcgcggccgctctgggtggctgcagacgga
catgtctttctggaggccttctcgccggtgtacaagcatgcacacgactttttgatagca
atatcggagcctgtatgcaggccccaccatatccacgagtacaagctgacttcatactcc
ttgtatgcggctgtgtcagtggggctgcagacacaggacatcattgaatacttgaggaga
ctcagcaagaccagcattccagatggcatcatagaatttattaagttatgcaccgtcagc
tatggaaaggtgaagttggtgctgaagcacaaccggtacttcgtagagagtccgtttccg
gaggttcttcagaagctcctcaaggaccctgtcattcagtcgtgtcgactgagacgggac
gttgacaacgagctggaagtgggtgtcgtctctcaggatgtaccaaatgccatcctgaat
gctaagaccctacaaggggcgacggacaagaatgaagcagatgccaatggacagaaggca
gtcccagttccagatgacatcactgcgtactacgaaaagatggaaaaggatgaagacgac
atagaggacacgcagacggtttctttcgaagtgaatcaggaccacatcgaagtgctgcaa
aaaaggtgtatcgagttggagtaccctttgttagcagagtatgacttcaagaatgacact
gtcaaccctgacatacacgtggacctgaaaccctcggcaatactgaggccgtaccaagag
aagagtctgaggaagatgtttggcaatgggagaggccggtctggcgtcattgtccttccg
tgcggagctgggaaatctctcgtgggagtcacggcctgctgcaccgtacgcaagcgctgt
cttgtgctctgcaactccggagtatccgtcgaacagtggaaagctcagttcaaaatgtgg
tccactgcggatgacagcgttatctgtagatttacatcggaagccaaagacaagcccatg
ggctgtgggatctgcatcaccacctactcgatgatcacccacacccaaaggcgttcctgg
gaggcagagcaggtcatgtcctggctcaaggagcaggagtggggcctcatgctcctcgac
gaggtgcacaccataccggccaagatgtttcggcgggtgctgaccatagtgcaggcccac
tgcaagctgggcctcaccgctaccctggtgcgagaggacgacaagattcaggacctcaac
ttcctcattgggcccaagctctacgaggccaactggctcgagctccagaaccacggctac
attgccaaggtccagtgtgccgaggtatggtgccccatgactccagagttctacagggaa
tatttatcagccaggagctgcaagaaattgctcctttttgtaatgaacccaaacaaattc
agggcttgccagttcctggtcaagttccatgagaggaggaacgacaagataatagttttc
tccgacaatgtctttgctctcaagcattatgccatcaagatgaacaggccgtacatctac
ggccccacctcacagcaggagcggatgcagattctccagaacttcaaatacaaccccaaa
gtaaacaccatcttcgtgtccaaagtggccgacacatctttcgacttgccggaggccaac
gtgctcatccaggtctctgcccatggaggctctcggaggcaggaggcacagcgtctcggg
cgcatcctcagggccaagaaaagtgccatagcagaggagtacaatgccttcttctactcg
ctcgtgtctgaggacacaatggaaatgcactactcgcgcaagaggcagcgcttccttgtc
aaccagggctacagctacaaggtcatcaccaagatggagggcatggacgaggaggacctt
gcgtaccgaacgaaggaagagcagaccaacctgttgcagcaggtactggctgcaaacgac
gccgatgcagaggaagagagggtggcaggggagaccagtacagcggggcaacgtttccag
atgtcacggagagctgggaacatgagctccatgtcgggagcggacagtgcagtctaccta
gaatacaggatggggaagaaagatctgggactcaggcatccgctcttcaaacggtttcgc
aagacctag |
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