Ixodes scapularis (black-legged tick): 8040951
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Entry
8040951 CDS
T01131
Name
(RefSeq) general transcription and DNA repair factor IIH helicase subunit XPB
KO
K10843
DNA excision repair protein ERCC-3 [EC:
5.6.2.4
]
Organism
isc
Ixodes scapularis (black-legged tick)
Pathway
isc03022
Basal transcription factors
isc03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
isc00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
8040951
09124 Replication and repair
03420 Nucleotide excision repair
8040951
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
isc03021
]
8040951
03400 DNA repair and recombination proteins [BR:
isc03400
]
8040951
Enzymes [BR:
isc01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
8040951
Transcription machinery [BR:
isc03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
8040951
DNA repair and recombination proteins [BR:
isc03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
8040951
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ERCC3_RAD25_C
Helicase_C_3
ResIII
Helicase_C
DEAD
SNF2-rel_dom
AAA_34
Motif
Other DBs
NCBI-GeneID:
8040951
NCBI-ProteinID:
XP_002399857
UniProt:
B7QGL8
LinkDB
All DBs
Position
Unknown
AA seq
782 aa
AA seq
DB search
MGKTKGSRGTKKWRKKADIEEATEDLYGEDDGNGDGVPAAASQKLSEASVEDEFGAKDYR
SQMQLRPDHSSRPLWVAADGHVFLEAFSPVYKHAHDFLIAISEPVCRPHHIHEYKLTSYS
LYAAVSVGLQTQDIIEYLRRLSKTSIPDGIIEFIKLCTVSYGKVKLVLKHNRYFVESPFP
EVLQKLLKDPVIQSCRLRRDVDNELEVGVVSQDVPNAILNAKTLQGATDKNEADANGQKA
VPVPDDITAYYEKMEKDEDDIEDTQTVSFEVNQDHIEVLQKRCIELEYPLLAEYDFKNDT
VNPDIHVDLKPSAILRPYQEKSLRKMFGNGRGRSGVIVLPCGAGKSLVGVTACCTVRKRC
LVLCNSGVSVEQWKAQFKMWSTADDSVICRFTSEAKDKPMGCGICITTYSMITHTQRRSW
EAEQVMSWLKEQEWGLMLLDEVHTIPAKMFRRVLTIVQAHCKLGLTATLVREDDKIQDLN
FLIGPKLYEANWLELQNHGYIAKVQCAEVWCPMTPEFYREYLSARSCKKLLLFVMNPNKF
RACQFLVKFHERRNDKIIVFSDNVFALKHYAIKMNRPYIYGPTSQQERMQILQNFKYNPK
VNTIFVSKVADTSFDLPEANVLIQVSAHGGSRRQEAQRLGRILRAKKSAIAEEYNAFFYS
LVSEDTMEMHYSRKRQRFLVNQGYSYKVITKMEGMDEEDLAYRTKEEQTNLLQQVLAAND
ADAEEERVAGETSTAGQRFQMSRRAGNMSSMSGADSAVYLEYRMGKKDLGLRHPLFKRFR
KT
NT seq
2349 nt
NT seq
+upstream
nt +downstream
nt
atggggaagaccaagggtagccgtggcacgaaaaagtggaggaaaaaggcggatatcgaa
gaagccactgaagatctgtacggcgaagacgacgggaacggagatggagtgccggcggcg
gccagtcagaaactcagcgaggcgtcggtggaggacgaatttggggcaaaggactatcgc
tcacaaatgcaactcagaccggatcactcgtcgcggccgctctgggtggctgcagacgga
catgtctttctggaggccttctcgccggtgtacaagcatgcacacgactttttgatagca
atatcggagcctgtatgcaggccccaccatatccacgagtacaagctgacttcatactcc
ttgtatgcggctgtgtcagtggggctgcagacacaggacatcattgaatacttgaggaga
ctcagcaagaccagcattccagatggcatcatagaatttattaagttatgcaccgtcagc
tatggaaaggtgaagttggtgctgaagcacaaccggtacttcgtagagagtccgtttccg
gaggttcttcagaagctcctcaaggaccctgtcattcagtcgtgtcgactgagacgggac
gttgacaacgagctggaagtgggtgtcgtctctcaggatgtaccaaatgccatcctgaat
gctaagaccctacaaggggcgacggacaagaatgaagcagatgccaatggacagaaggca
gtcccagttccagatgacatcactgcgtactacgaaaagatggaaaaggatgaagacgac
atagaggacacgcagacggtttctttcgaagtgaatcaggaccacatcgaagtgctgcaa
aaaaggtgtatcgagttggagtaccctttgttagcagagtatgacttcaagaatgacact
gtcaaccctgacatacacgtggacctgaaaccctcggcaatactgaggccgtaccaagag
aagagtctgaggaagatgtttggcaatgggagaggccggtctggcgtcattgtccttccg
tgcggagctgggaaatctctcgtgggagtcacggcctgctgcaccgtacgcaagcgctgt
cttgtgctctgcaactccggagtatccgtcgaacagtggaaagctcagttcaaaatgtgg
tccactgcggatgacagcgttatctgtagatttacatcggaagccaaagacaagcccatg
ggctgtgggatctgcatcaccacctactcgatgatcacccacacccaaaggcgttcctgg
gaggcagagcaggtcatgtcctggctcaaggagcaggagtggggcctcatgctcctcgac
gaggtgcacaccataccggccaagatgtttcggcgggtgctgaccatagtgcaggcccac
tgcaagctgggcctcaccgctaccctggtgcgagaggacgacaagattcaggacctcaac
ttcctcattgggcccaagctctacgaggccaactggctcgagctccagaaccacggctac
attgccaaggtccagtgtgccgaggtatggtgccccatgactccagagttctacagggaa
tatttatcagccaggagctgcaagaaattgctcctttttgtaatgaacccaaacaaattc
agggcttgccagttcctggtcaagttccatgagaggaggaacgacaagataatagttttc
tccgacaatgtctttgctctcaagcattatgccatcaagatgaacaggccgtacatctac
ggccccacctcacagcaggagcggatgcagattctccagaacttcaaatacaaccccaaa
gtaaacaccatcttcgtgtccaaagtggccgacacatctttcgacttgccggaggccaac
gtgctcatccaggtctctgcccatggaggctctcggaggcaggaggcacagcgtctcggg
cgcatcctcagggccaagaaaagtgccatagcagaggagtacaatgccttcttctactcg
ctcgtgtctgaggacacaatggaaatgcactactcgcgcaagaggcagcgcttccttgtc
aaccagggctacagctacaaggtcatcaccaagatggagggcatggacgaggaggacctt
gcgtaccgaacgaaggaagagcagaccaacctgttgcagcaggtactggctgcaaacgac
gccgatgcagaggaagagagggtggcaggggagaccagtacagcggggcaacgtttccag
atgtcacggagagctgggaacatgagctccatgtcgggagcggacagtgcagtctaccta
gaatacaggatggggaagaaagatctgggactcaggcatccgctcttcaaacggtttcgc
aagacctag
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integrated database retrieval system
