Ixodes scapularis (black-legged tick): 8042303
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Entry
8042303 CDS
T01131
Name
(RefSeq) U4/U6 small nuclear ribonucleoprotein Prp4
KO
K12662
U4/U6 small nuclear ribonucleoprotein PRP4
Organism
isc
Ixodes scapularis (black-legged tick)
Pathway
isc03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
isc00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
8042303
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
isc03041
]
8042303
Spliceosome [BR:
isc03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6 snRNP specific factors
8042303
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40_Prp19
WD40
WD40_CDC20-Fz
WD40_WDHD1_1st
Beta-prop_EML_2
WDR55
Beta-prop_CAF1B_HIR1
Beta-prop_TEP1_2nd
EIF3I
WD40_MABP1-WDR62_2nd
Beta-prop_WDR90_POC16_2nd
PRP4
Beta-prop_WDR75_1st
ANAPC4_WD40
NBCH_WD40
WD40_MABP1-WDR62_1st
Beta-prop_EML
Beta-prop_TEP1_C
Beta-prop_EIPR1
WDR90_beta-prop_4th
Beta-prop_Vps41
Beta-prop_DCAF4
Beta-prop_SCAP
Beta-prop_IFT122_1st
WD_LRWD1
Ge1_WD40
Beta-prop_WDR19_1st
Beta-prop_WDR75_2nd
DUF7165
Motif
Other DBs
NCBI-GeneID:
8042303
NCBI-ProteinID:
XP_029849040
UniProt:
A0A4D5S0A9
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All DBs
Position
Unknown
AA seq
522 aa
AA seq
DB search
MSDDEDIAYVKRQRVLHYGSLEEKERQRLADRDAAEDEGSDEDSQNMDLKAAIASGNIHI
SDEYMEIEDEGGRDRQQLLEEFERRKKARQINVSTDDTEVRSTLREMGEPICLFGEGPAD
RRERLRQLLAQVGQDALRRRQEEEQQKERELRRDTSETTWYHESSEALKSCRLWIARFSL
PRARHRIATAKEKLKALGPANTDSQVHAKRQELYKTLRSLNINCSQIGDTRPISFCEFSP
NSQMLATASWSGLCKLWSVPDCQPIRTLRGHNCNVGAITFHPRSTFIQSENSLNLASCST
DGLVNLWNLKSEEPISSLKGMCPHRVSRVAFHPSGRFLACCVFDNSWRLVDLEREMEVLH
QEGHSKAVYDISFQCDGSLAATGGMDAFGRIWDLRTGRCIMFLEGHLKSVLSLSFSPNGY
VLATGSEDNTIKVWDLRQRKCEYTIPAHTNLVSRVIFEKISGEYLVTTSYDNSVKIWSNP
EWTPVHSLSGHDGKIMGADISPSGKYLATSSFDRTFKLWTPE
NT seq
1569 nt
NT seq
+upstream
nt +downstream
nt
atgtcggacgacgaggacatcgcctacgtgaagaggcagagggtccttcactatggcagc
ctcgaggagaaggaacgacagcggttggccgatagagatgcggccgaggacgaagggagc
gacgaggactcccagaacatggatctcaaggccgccatcgcctccgggaacatccacatc
tcggacgagtacatggaaatcgaagatgaaggagggagagacaggcagcagcttcttgaa
gaattcgaaagacgaaagaaggctcgacagatcaatgtctccaccgatgatactgaggtc
cggtccaccctgagagagatgggagagcccatctgcctgtttggggagggccctgcggac
cggcgggagcgcctgcggcagctgctggcgcaggtcgggcaggacgccctgcggcggcgc
caggaggaggagcagcagaaggagcgggagctgcgtagggacacctcggagaccacctgg
tatcacgagagcagcgaggccctgaagagctgccgcctctggatcgcgcgcttctccctg
ccccgcgcgcggcaccgcatcgctacggccaaggagaaactcaaggccctggggcccgcc
aacaccgactcccaggtgcacgccaaacgccaggagctttacaagacgctcaggtccctg
aacatcaactgcagccagatcggggacacacggccgatctccttctgcgagttcagccca
aactcccagatgttggccactgcctcctggagcgggctgtgcaagctgtggtctgttcct
gactgccagcctatcaggacattgagaggccacaactgcaacgtgggagccatcacattc
catccacgctctaccttcatccagtccgagaactcgctgaacctggcttcctgctccact
gacggacttgtcaacctgtggaacctgaaaagcgaggaacccatcagctccctgaaaggg
atgtgccctcacagggtgtccagagttgcattccacccatcaggaaggtttcttgcctgc
tgtgtgtttgacaactcctggcgactcgtggacctcgagagggagatggaggtcctgcat
caggagggccacagcaaggccgtctacgacatcagcttccagtgcgacggatcgctagca
gccacgggtggtatggacgcctttggccgcatttgggacctccgcacggggcgctgcatc
atgttcctcgagggacacctcaagtctgtgctcagcttgtccttctcacccaacgggtat
gttttagcaactggcagcgaagacaacaccatcaaggtatgggacctgaggcagcgcaag
tgtgaatacaccataccagcacacactaacttggtgtctcgagtcatctttgagaaaata
tcgggggaatacctcgtcacaacatcctatgacaactccgtcaagatttggtcaaatccc
gaatggacaccagtccacagtctgagtggccatgatggcaaaatcatgggcgcagatatt
tcacctagtggaaagtacctggcaacatcttcatttgaccgaactttcaagctttggacc
cctgaataa
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integrated database retrieval system
