Ixodes scapularis (black-legged tick): 8043910
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Entry
8043910 CDS
T01131
Name
(RefSeq) DNA-directed RNA polymerase II subunit RPB2
KO
K03010
DNA-directed RNA polymerase II subunit RPB2 [EC:
2.7.7.6
]
Organism
isc
Ixodes scapularis (black-legged tick)
Pathway
isc03020
RNA polymerase
isc03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
isc00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
8043910
09124 Replication and repair
03420 Nucleotide excision repair
8043910
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
isc03021
]
8043910
03400 DNA repair and recombination proteins [BR:
isc03400
]
8043910
Enzymes [BR:
isc01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
8043910
Transcription machinery [BR:
isc03021
]
Eukaryotic type
RNA polymerase II system
RNA polymerase II
Core subunits
8043910
DNA repair and recombination proteins [BR:
isc03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase II complex
8043910
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_1
RNA_pol_Rpb2_2
RNA_pol_Rpb2_7
RNA_pol_Rpb2_4
RNA_pol_Rpb2_3
RNA_pol_Rpb2_5
Motif
Other DBs
NCBI-GeneID:
8043910
NCBI-ProteinID:
XP_029846983
UniProt:
A0A4D5RHU7
LinkDB
All DBs
Position
Unknown
AA seq
1174 aa
AA seq
DB search
MYEPEEDAFREDESEEITPDLWQEACWIVISAYFDEKGLVRQQLDSFDEFIQMSVQRIVE
DTPQIDLQAEAQHASGEIENPPRYLLKFEQIYLSKPTHWEKDGAPSPMMPNEARLRNLTY
SAPLYVDITKTVIKEGEEPVETQHQKTFIGKIPIMLRSTYCLLNSLTDRDLSELNECPLD
PGGYFIINGSEKVLIAQEKMATNTVYVFQMKDSKFVFKAECRSCLEHSSRPTSTLWVNML
ARGGQGVRKSAIGQRIIAILPYIKQEIPIMIVFRALGFVADRDILEHIIYDFEDPEMMEM
VKPSLDEAFVIQEQNVALNFIGARGAHPGVTKERRIKYSREILQKEMLPHVGVSDFCETK
KAYYLGYMVHRLLLAALGRRELDDRDHYGNKRLDLAGPLMAFLFRGLFRNLTKEVRMYAQ
KFIDRGKDFNLELAIKTRIITDGLRYSLATGNWGDQKKAHQARAGVSQVLNRLTYASTLS
HLRRVNSPIGRDGKLAKPRQLHNTLWGMICPAETPEGHAVGLVKNLALMSYISVGSQPSP
ILEFLEEWSMENLEEIAPSAIAEATKIFVNGCWVGIHRDPDQLMNTLRKLRRQMDIIVSE
VSMVRDIRDREIRIYTDAGRICRPLLIVEDQKLLLKRRHIDSLKEREYNNYSWQDLVASG
VVEYIDTLEEETVMLSMTPDDLQDKGFAYCSTYTHCEIHPSMILGVCASIIPFPDHNQSP
RNTYQSAMGKQAMGIYITNFHVRMDTLAHVLYYPHKPLTTTRSMEYLRFRELPAGINSIV
AIMSYTGYNQEDSIIVNASAVDRGFFRSVFYRSYKDSECKRVGDQEEQFEKPTRETCQGM
RNAIYDKLDDDGIIAPGTRVSGDDVIIGKTITLPENDDDLESTNRRFTKRDASTFLRNSE
TGIVDQVMLTVNAEGYKFCKIRVRSVRIPQIGDKFASRHGQKGTCGITYRQEDMPFTADG
LTPDIIINPHAIPSRMTVGHLIECLQGKVSANKGEIGDATPFNDSVNVQKISNLLQEYGY
HLRGNEVMYNGHTGRKVNAQIFLGPTYYQRLKHMVDDKIHSRARGPVQILVRQPMEGRAR
DGGLRFGEMERDCQISHGAAQFLRERLFEVSDPYRAHICNLCGLLAIANLRNNTFECKGC
RNKTQISQIRLPYACKLLFQELMSMSIAPRMMVL
NT seq
3525 nt
NT seq
+upstream
nt +downstream
nt
atgtacgaaccagaagaagacgccttccgggaagatgagtcggaggagatcacccccgac
ctgtggcaggaggcctgctggatcgtcatcagcgcctactttgacgagaagggcctcgtg
cggcagcagctggactcctttgacgagttcatccagatgtcggtgcagaggatcgtggag
gacaccccccagattgacctgcaagcagaggcccagcatgcctctggggagatagagaat
ccgccccgctacctgctcaagtttgagcagatctacctgtccaagccgactcactgggaa
aaggacggcgccccgagccctatgatgcccaacgaagctcggctgcggaacctgacgtac
tccgctccgctgtacgtggacatcaccaagacggtgatcaaggagggcgaagagcctgtg
gagacgcagcaccagaagaccttcatcggcaagattcccatcatgctgcgctccacgtac
tgcctgctcaacagtctgacggaccgagatttgagcgagctgaacgagtgccccttggac
cccggggggtactttatcatcaacggttcagagaaggtactcatagcccaggagaagatg
gccaccaacaccgtgtacgtcttccaaatgaaggactccaagtttgtgttcaaggcggag
tgccggtcgtgcctggagcactcttcacgacccaccagcaccctttgggtgaacatgctg
gctcgcggaggacagggagtgcgcaagagcgctatcggccagaggatcatcgccatcctg
ccgtacatcaagcaagagattcccatcatgattgtgtttcgggcactgggcttcgtggct
gaccgagatatcttggagcacatcatctacgacttcgaagaccccgagatgatggaaatg
gtgaagccctccctagacgaggccttcgtgattcaagagcagaacgtggccctcaacttc
atcggtgctcgtggggcgcaccccggagtgaccaaggagaggcgcatcaagtattcgcgc
gagatcctccagaaggagatgctaccccacgtgggagtgagcgacttctgtgagacaaag
aaggcctactacctggggtacatggtgcaccggctgctcctggcagccctgggccgcagg
gagctggacgaccgggatcactacgggaacaagaggctagatcttgcaggacccctcatg
gccttcctcttcagggggctgttccgcaacctgaccaaggaagtgcgcatgtacgcccag
aagttcattgaccggggcaaggacttcaacctagagctggccatcaagacgcgcatcatc
accgacggcctgcgctactccctcgccacaggcaactggggagaccagaagaaggctcac
caggcacgtgccggcgtatcccaggtcctgaaccggctgacctacgcgtccaccctctcc
cacctccgccgcgtcaactcgcccatcggacgcgacggcaaactggccaagccgcgccag
cttcataacaccctgtggggcatgatctgccccgccgagactcccgagggccacgctgtg
gggctcgtcaagaacctcgccctcatgtcctacatctcggtcggctcccagccgtctccc
atcctcgagttcttggaagagtggagcatggagaatttggaggagattgcgccgtccgcc
atcgcggaggccaccaagatttttgtcaacggctgctgggtcgggatacaccgtgacccg
gaccagctgatgaacactctccgcaagcttcgacgccagatggacatcatcgtgtcggag
gtgtccatggttcgcgacatccgggaccgggagatccggatctatacggatgcgggacgc
atctgtcggccactgctcatcgtcgaagaccagaagctgctgctcaagcggcgccacatc
gacagcctcaaggaacgcgagtacaacaactacagctggcaggacttggtcgccagcggg
gttgtggagtacatcgacaccctagaggaagagactgtgatgctctcgatgacgccggat
gacctccaggacaagggatttgcgtactgttcgacatacacccactgtgagatccacccg
tccatgatcctgggcgtgtgcgcatccatcattccgttcccggaccacaaccagagtccc
cgtaacacttaccagtctgctatgggcaagcaggccatgggtatctacatcaccaacttc
catgtacgcatggacacgctggcccacgtgctgtactacccacacaagccgctcaccacc
acacggtccatggagtacctccggtttagggagctgcccgcagggatcaactccatcgtg
gctatcatgtcgtatacggggtacaaccaggaggactctatcattgtaaacgcatcggcc
gtggacaggggcttttttaggtccgtgttctaccggtcgtacaaggactcggagtgcaag
cgggtcggcgaccaggaagagcagtttgaaaaaccgacccgggagacatgccaaggcatg
cgcaacgccatctacgacaagctggacgacgacggcatcatcgccccgggcaccagggtg
tccggagacgacgtcatcattgggaagactatcacgctgccggaaaacgacgatgacctg
gagagcaccaaccgccggttcaccaaacgggatgccagcaccttcctccggaacagcgag
accggcatcgtggaccaggtgatgctgacggtgaacgcggagggctacaagttctgcaag
atccgggtgcgctcggtgcgcatcccgcagatcggggacaagtttgccagccggcacggc
caaaagggcacctgcggcatcacctaccgccaagaggacatgccgttcacggcagacggc
ctcacaccggacatcatcatcaacccccatgccatcccgtcccgaatgacggtgggccat
ctgatcgagtgccttcagggcaaggtctcggccaacaagggggagattggcgacgccacc
ccattcaacgactccgtcaacgtgcagaagatctccaacctgctccaagagtatggctac
cacctgcgtggaaatgaggtgatgtacaacgggcacacgggacgcaaggtgaatgcccag
atcttcctcggccccacctactaccagcggctgaagcacatggtggatgacaagatccac
tccagggctcgaggtcccgtgcagatcctggtccggcaacccatggagggcagggccagg
gacggcggcctccggttcggtgagatggagcgggactgccagatctctcacggcgcagcc
cagtttttacgcgagcggctgttcgaggtgtcggacccgtaccgggcccacatctgcaac
ctgtgtggtctgctggccatcgccaacctgcgcaacaacaccttcgagtgcaagggctgc
cgcaacaagacccagatctctcagatccgcctcccgtatgcctgcaagcttcttttccag
gagctcatgtccatgtctatagcaccccgtatgatggtcctgtga
DBGET
integrated database retrieval system
