Ixodes scapularis (black-legged tick): 8050645
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Entry
8050645 CDS
T01131
Name
(RefSeq) NPC intracellular cholesterol transporter 1 isoform X1
Organism
isc
Ixodes scapularis (black-legged tick)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
NPC1_N
NPC1_MLD
Sterol-sensing
Patched
MMPL
ACR_tran
Motif
Other DBs
NCBI-GeneID:
8050645
NCBI-ProteinID:
XP_029824526
LinkDB
All DBs
Position
Unknown
AA seq
1440 aa
AA seq
DB search
MSHSRTHSKLSRAVVNSKISYGIAAVTMDTGRRRVTTVLRILVCLLVVLAQGTPAESRCS
FRGKCGIDEDTEKERPCLYTGEGQPMQEEGLSILQELCPHLIEGQAEPKFCCDYPQLVTM
KAELEQPLGLGMGKCPTCYSNFVRIFCGFCDPNHADYIAINRTEPSDEQEGKETVLAVDY
AVSKEFAHGAFDSCAHVQSVVTDNTVMQFMCGSKGKDCTAADWFTFLGSTSDENGFAPLK
FNYIITGERSITASGVSLKPFNPGHHRCSEPFGASKQRCSCSDCPEVCVALEPPLLPPDA
MPFTIGRYDGMLVVSMLLFVLLSAGVLGVFFLKSNRRRSSFRGVPKCGAFSSVTSVSGSS
ESSVSDTSGNNNDIIRMPLHRPTKPARSVLLAAVDLGSLEEVEPLRSKRSISSNGFTNAS
AVDSPTPSPPGSPISLRPPPLSGDAVNNGSVANGNANGSAVKPPAEEPHVRTLSSFGATM
EQLLQAGFHRWGLFVARNPLLVLIAALAVSVLLSLGLLKFTVTTNPVDLWVSHSSLARKH
MNYFNSHFGPFYRVEQIILRPKNQQFFVLETDGVNRTFGPAFEKNFMMEALRLQLAVEAV
VGRLRLDGTPIHELEEEVLDPKDVKNVTIQDVCLSPLSPLNRHCSVQSIFAYYQDDPSKL
NLTDKLDPLSYLKHFEHCSKTPSDVNCFAKYGGPIDDISLVLGGFNGSDFHLASALVITI
PVNNFNDVEKKYPALAWEKEFVKLMKNYNNTEVMTVAFMAERSIEDELERGSHSDVVTVG
ISYVIMFAYIAIALGDINSCSRLLIDSKISLGLVGVIIVLLSVVASLGIFSFFGVSATLI
IVEVIPFLVLAVGVDNIFILVQQFQRDVRREGETTVEQVGRLVGEVAPSMMLSSVSMSAC
FFIGALTETPAVRIFALYAGVALLINFFLQMTCFLSLFTLDTLRQEDGRLDLCFCIRASK
KSRPSQNTSLLYKFFKKVYAPFLLNNSVRVVVMITFIGWLCSSLAVIGKIEVGLDQELAM
PKDSYLQRYFDYLKKYLQVGPPVYFMVTEGYDYSKVENQAKLCIQEQVCDQDSVGAKLKQ
LTLLSNRTYVTRLRSYWLDQYILYMRSSGCCYEGQNSSDFCYSQYGDGGGKCKSCHVPRE
KPFVGEEFSHYLSWFLKDVPGVKCSSAGRAEHGGSIDHVNGTIKSAYFSAYHPVLKTSKD
FYMALDWARLISHNLTQDIQAIQPGVQVIPYSLVHVFYEQYLTMWPDTFKNLALSLGAIF
VVTFVLLGLDFVSATVVTFTIVMIIVNLMGLMYWWDISLNAVSLVNLVVGVGISVEFCSH
LVRVFALSGAPSRVKRAQDALTKMGSSILSGITLTDCGILVLAFAKSQIFQVFYFRMYLG
IIAFGTLHSLIFLPVFLSILGPPVNKDKLIEHIQLQEMATVTTAVVRSKADTYTRKDVSA
NT seq
4323 nt
NT seq
+upstream
nt +downstream
nt
atgtcacattcccggacccattctaaattatcccgtgctgttgtgaactctaaaatctcg
tacggcatcgcagccgtcacaatggataccggcaggcgacgcgtcacgactgtgctcagg
attttagtgtgtctactcgtcgtgctggcacagggcacccctgcagaaagtagatgttcc
tttcgaggaaaatgcggcatagacgaagacacggagaaggaacgaccgtgcctatataca
ggggagggacagccgatgcaagaagaaggcttgagcatccttcaagagctgtgtcctcat
ttgatagaaggtcaggcagagccaaaattctgctgtgactacccgcagctggtaacgatg
aaggccgagctggaacagcccctcggcctgggcatgggcaagtgtcccacgtgctacagc
aactttgtccgcatcttttgcggcttttgcgacccaaaccacgccgactacatcgccatc
aacaggaccgagccgagtgacgagcaggaagggaaggagacggtcctggccgtggactac
gccgtcagcaaagagtttgcgcacggggccttcgactcgtgtgcccacgtgcaatcggtg
gtgacggacaacacggtgatgcagttcatgtgcggtagcaagggcaaggactgcacggcg
gccgactggttcaccttcctgggaagcacctccgacgagaacggctttgctccgctcaag
ttcaactacatcatcacgggggagaggagcattacggccagcggcgtttccctcaagccg
ttcaacccaggccaccatcgatgctcggagccatttggagccagcaagcagcggtgcagt
tgcagcgactgcccggaggtttgcgtggccttggagccaccgctgctgccaccagacgcg
atgcctttcaccattggtcgctacgacgggatgctggtggtttccatgctcctctttgtg
ctcctcagcgccggcgtcctcggagttttcttcctcaagagcaacaggaggcggagctcg
ttcagaggggtacccaaatgtggtgccttttcatcagttacatcagtgtcaggctcatcg
gagtccagtgtttccgacacgagcggcaacaacaatgacattatcaggatgccgctgcac
cggccaaccaaaccggcccgttccgttttgttggcggctgtggatcttggctcccttgag
gaggtggagcccctcaggtcaaagcgctcaatcagctccaacggcttcaccaacgcctcg
gccgtggactccccgacaccatctcctcccggctctcctatctcgctccggccgccgccg
ctgtccggagacgcggtcaacaacggcagcgtcgccaacggcaacgccaacggcagcgcg
gtgaagccccccgcggaggagccgcacgtccgcacgctctcgtcgttcggggccaccatg
gaacaactgctgcaggccggcttccaccgctggggcctctttgttgcccgcaaccccctc
ctggtgctcatcgccgcgctggctgtgagcgtcctcctgtctctgggtctgctcaagttt
actgtgactacgaaccccgtggacctgtgggtgtcacatagcagtctggccaggaaacac
atgaactacttcaacagtcactttggtcctttctaccgggtggagcagataatcctccgt
cccaagaaccagcagttctttgtgctggagacggatggagtaaacagaacatttgggccg
gcattcgagaagaatttcatgatggaggccctgaggctgcagctggcagtggaagcagtg
gtgggcaggctgcgtctcgatgggacgccgatccacgagttggaagaagaggttttggat
ccgaaggacgtgaagaacgtcaccattcaggacgtctgcctgtccccactgtccccgctg
aacaggcactgttcggtgcagagcatcttcgcctactaccaagacgacccgtccaagctc
aacctgacggacaagttggatccgctctcttacctcaagcacttcgaacactgcagcaaa
actccgtctgacgtcaactgcttcgccaagtatggaggaccgatcgatgacatctccctg
gttctggggggattcaatgggagtgactttcacctggcctctgctctggtaatcaccata
ccggtgaacaacttcaacgacgtagagaagaagtaccctgccctcgcctgggagaaagag
ttcgtcaagctcatgaagaactacaacaacaccgaggtcatgactgttgccttcatggct
gagagatctatcgaagacgaactggagcgaggcagtcactctgacgtcgtgacggttggc
atcagctacgtcatcatgttcgcctacatcgccattgcgctgggcgacatcaacagttgc
agtagacttttgattgactcaaagatttccctgggcctggttggagtgataattgttctt
ctgtccgtggtggcctcgctgggcatcttcagcttctttggcgtttctgccacgctcatc
attgttgaagtgatccccttcctggtgcttgctgttggggtcgacaacattttcatcctg
gtgcagcagtttcagcgcgatgtccgtcgcgagggagagacaacggtggagcaggtgggg
aggctggtaggagaggttgccccaagcatgatgctctccagtgtctccatgtctgcctgc
ttcttcatcggtgccttgacagaaactcccgcagtgcggatctttgcgctgtacgccggt
gtcgccctgctcatcaacttcttcctacaaatgacttgcttcctctccttgtttactctg
gacacacttaggcaggaggacggccgtctagatctgtgcttctgcatccgtgcttcaaag
aagagccgtccgtcccaaaacaccagtctgctgtacaagttcttcaagaaagtctacgca
cccttcttgctgaacaactccgtgcgtgtggtggtgatgatcacgttcattggctggctc
tgttcgtccctcgccgtcatcggaaaaattgaagttgggctggatcaggagctggccatg
cctaaggattcctaccttcagcggtactttgactacctcaagaagtacctccaagtagga
ccgccggtgtacttcatggtcacggagggctatgactactccaaggttgagaaccaggca
aaactctgcatccaggagcaagtgtgtgatcaggactctgtgggtgctaagttgaagcag
ctcacactgctcagcaacaggacttacgtgacgaggttacggtcttactggttggaccag
tacatcctttacatgcggtcgtccggctgttgctacgagggccagaacagctcagacttc
tgctattcgcagtatggtgatgggggtggaaaatgcaaaagttgtcacgttccgcgggag
aagcccttcgtaggagaggagttttcgcattacctctcttggttcctgaaggacgtaccc
ggcgtcaagtgttcttcagcaggtcgtgcggaacatggcggttcgattgatcacgtaaac
ggaactattaaatctgcctacttttcggcctaccaccctgtcctgaagacgtctaaggac
ttctacatggcactcgactgggctcgactcatctcccacaacctgacccaagacatacag
gccattcagcccggagtgcaagtcatcccttacagcctggtgcacgtgttctacgagcag
tacctcaccatgtggccggacacgttcaagaacctggccctgtcgctgggtgccatattt
gtggtcacctttgtgctgctggggctggactttgtgtctgcgacggtggtcaccttcact
atcgtcatgatcatcgtcaacctgatgggcctgatgtactggtgggacatctcgctcaac
gcggtgtccctcgtcaacctcgtggtgggcgtggggatctcggtggagttctgctcccac
ctggtgcgagtgtttgctctcagcggtgccccgtccagagtcaaaagggcccaggacgca
ctcaccaagatgggcagttcgatcctgtccggaatcacgctgacggattgtggcatcctg
gtgctagcctttgccaagtcgcagatattccaggttttctatttccgcatgtacctgggc
atcattgcctttggcacgctgcacagcctcatcttcctcccggtgtttctaagcatcctg
ggtccccccgtcaacaaggacaagttgatagagcacattcagctccaggagatggccaca
gtcactacggccgtcgtgaggtccaaggcagacacctacactcgaaaggacgtcagcgca
taa
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