KEGG   Ichthyobacterium seriolicida: JBKA6_0011
Entry
JBKA6_0011        CDS       T05228                                 
Name
(GenBank) type I restriction-modification system, restriction subunit R
  KO
K01153  type I restriction enzyme, R subunit [EC:3.1.21.3]
Organism
ise  Ichthyobacterium seriolicida
Brite
KEGG Orthology (KO) [BR:ise00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02048 Prokaryotic defense system [BR:ise02048]
    JBKA6_0011
Enzymes [BR:ise01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.21  Endodeoxyribonucleases producing 5'-phosphomonoesters
    3.1.21.3  type I site-specific deoxyribonuclease
     JBKA6_0011
Prokaryotic defense system [BR:ise02048]
 Restriction and modification system (R-M system)
  Type I R-M system
   JBKA6_0011
SSDB
Motif
Pfam: T1RH-like_C SWI2_SNF2 HSDR_N T1R_D3-like ResIII Helicase_C
Other DBs
NCBI-ProteinID: BAV94024
UniProt: A0A1J1E920
LinkDB
Position
complement(10570..13770)
AA seq 1066 aa
MSENKFFENNIERLIVEKLQSLGYNYLYGQQISAEGEFSERRSYSDVLLRERFRRALSQL
NPNIPEEAIQDAFSQVSNISASEDLLSGNEAFHKMLTQGIRVSYYKDGTTRGDLVRIIDF
DNIKKNDFTVVNQFTVVEHNDIKKPDIILFVNGLPLVVIELKNSLYKKETIKSAYNQLQA
YINSIPKLFIYNSLCVISDGIEAKSGSLSAAFSRFLNWKTKDRKTLAPNLDSSIEILIQG
QLNKATLTDIIRHFTLFDKSKIEDPKRGITTINIVKRVASYHQYYGVNKAVESSKIASLE
NGNRKAGVIWHTQGSGKSLSMVFYAGKIVRELNNPTVLVIIDKNDFGELFHTFTSASQLL
RQTPVKANDKQHLKTLLKVTSGGVIFTTIQKFQIKEGNEYERLTDRKNVIVIANEADKIQ
YGFRSKKTDDIDENGNVIKGQPIVYGFAKYMRDALPNATYLGFTGTPIDSKDINTFGVFG
NYVDTYDIEQSINDGLTLPVFYESRFGKVNLSEQDRELVGQLDEKSVSQELVEIQKPRSN
WARLEASIGSESRIKNIAKDIVDHFIERQSVFEGKAIVVAMSRRIVMQLYDEIIAIMPEW
HDNDVYKGVIKAVVAISPSVGSSNTEKIKYHAKKQQRRTLALRMKDPYDQLKIVIVTNMW
LTGFDVPSMHTLYIYKPLKGYKLMQAIARVNRIYKDKPGGLVVDYLGLASDFKKSLDFYG
NSRGKGNPVIFEKEAEDLFLEKIKVVSQMFLEKPELGNLKSLEHAFVNYKDFFSSKKSER
LKIILTAQEHILSLDNGKKRFIDEVTSLSKLYVNTMMHSKVIELKDEIALFQALKVRLSK
YISEIVDKTDYESESLIHMLSNEDLFSEEIVDVFDAAGIKKPEGSVLSEEFLIQIKQMQH
QNTALEVLKKILREEIKYIAKINTVQGESLREILENTVDEYRNKTLTNTDAIERLASLAK
QIKELYGPRDFLGLTDYELIFYDIISQGQGAKEVLGDEQLRDLAVYLADTFKNNISVDWV
VKESVRAKLKVLLKRGLRKYGYPIDQQKLITRIILNQARFLPELLS
NT seq 3201 nt   +upstreamnt  +downstreamnt
atgagtgaaaataagttttttgaaaataatatagaacgacttatagtagaaaaattacag
agtttgggctataactatttgtacggtcagcaaatatcagcagagggtgaattttcagag
agaaggagctatagtgatgtattgttacgtgagcgtttcaggcgagctttatcgcagtta
aatcctaatattcccgaagaggccatacaagatgcattcagtcaggtttcaaatatatct
gcatcagaagatctgttatcaggtaatgaagcatttcataagatgctcactcaaggcatt
agggtgtcttattataaagatggtactactcgtggagatttagttcggatcatagatttt
gataatattaaaaaaaatgattttacagtagtaaatcaatttacagtagtagagcataac
gatataaaaaaaccagatattatactatttgtcaatgggttgccattggtagttatagag
ctaaaaaattccctttacaaaaaggagactataaaatctgcatataatcagttacaagca
tatataaattccataccaaaattatttatctacaatagtctttgcgtaatctcagatggt
atagaagcgaaatcgggatccttatcagcagctttttctaggtttttgaattggaagaca
aaagatcgaaaaaccctagctcctaacttagactcttctattgaaattctaattcaaggg
cagttaaataaagctacccttacagatattataagacatttcacattatttgataaatct
aaaatagaagatcctaaaagaggtattacaactattaatattgttaaaagagtagcctct
tatcatcagtactatggtgttaacaaagcagtagagagcagtaaaatagcctctttggaa
aatggaaatagaaaagctggagtaatatggcatacccaaggttctggcaaatctctatca
atggttttttatgctggaaagatagttagagagctaaataacccaactgttttagtaata
atagataagaacgactttggtgaattatttcacacctttacttctgcatcacaattactg
aggcaaacacctgtaaaagcaaatgataaacaacacttaaaaacacttttaaaagtgact
tctggtggtgttatttttacgactatacaaaaatttcaaataaaggaaggaaatgagtat
gagagattaaccgatcgcaaaaatgtgattgtaatagcaaatgaagccgataaaatacaa
tatggttttaggtctaaaaaaactgatgatatagatgagaatggcaatgttataaaaggt
caacctatagtgtatggttttgcaaaatatatgcgtgatgctttgccaaatgctacttat
ttggggtttacaggaactccaattgattctaaagatataaacacctttggtgtttttggc
aattacgtagatacgtatgacatagaacaatcaataaatgatggtttaacattaccagtt
ttttatgagagtagattcggtaaggtaaacttaagtgaacaagacagagaattagtaggg
caattagatgaaaaatcagtaagtcaggaattagttgaaatccaaaaaccgagatcgaat
tgggctaggttagaggcttcgataggtagtgaaagtaggattaaaaacatagccaaagat
atagtcgatcattttattgagaggcagagtgtatttgaaggaaaggcaattgtagtggcc
atgtcaagaaggattgtcatgcagttgtacgatgaaattattgctataatgccagagtgg
catgacaatgatgtatataaaggagttattaaagcggttgtggctatttcaccttctgtg
ggctcatctaatacggagaagattaaatatcacgcaaaaaaacaacagcgtaggacattg
gcattgcgcatgaaagatccatacgatcagctaaaaatcgtgattgttacaaatatgtgg
ctgactggattcgatgtgccttctatgcacactctctacatatataagcctttgaaaggt
tataagctaatgcaagcaatagctagagtaaacagaatttataaggataaaccaggtggt
ttagtcgtcgattatttaggcttagcatcagactttaaaaagtcattagatttttatggt
aatagtagaggcaaaggcaatcctgttattttcgaaaaggaagcggaagatttattttta
gaaaagataaaagtggtatcgcaaatgtttttggaaaaaccagaactaggaaatttaaaa
tcattggagcatgcctttgtgaattataaagattttttctcttctaaaaaaagtgaaaga
ctaaaaattattttgacagcccaagagcatattctcagtttggacaatggaaagaaacgc
tttatagatgaggttacctcattatctaaactatatgtgaatactatgatgcatagtaag
gtgatagaattaaaagatgagattgctttgtttcaggcattaaaagttagattgtccaaa
tacatttccgagatagttgataaaactgattatgaatcagaatccctaatacatatgttg
tcaaatgaggatttattttcagaggaaattgttgatgtttttgatgcagctgggattaaa
aaacctgagggatctgttctttcagaggaatttttgattcaaataaaacaaatgcaacat
caaaatacggccttagaagtattgaaaaaaatactgagagaagaaataaaatacatagct
aaaataaatacagttcaaggagagtcactaagggagattttagaaaatactgttgatgag
tatagaaataaaacactcactaatactgatgctattgaaagactagcatccttagccaaa
cagataaaagaattatatggcccgcgtgatttcttaggattgacagattatgaattgata
ttttatgatataatttctcaaggtcaaggtgcaaaagaagttttgggagatgagcagcta
agagatttggctgtgtatttagccgatacgtttaaaaataatatatctgtagattgggtt
gtaaaagaaagtgtaagagctaaattaaaggtattgctaaaacgtggacttagaaaatat
ggatatccaatagatcagcaaaaactgataactagaattattttaaatcaggccaggttt
ttgccagaattattgagttaa

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