Ichthyobacterium seriolicida: JBKA6_0243
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Entry
JBKA6_0243 CDS
T05228
Name
(GenBank) DNA-binding protein
KO
K03530
DNA-binding protein HU-beta
Organism
ise
Ichthyobacterium seriolicida
Brite
KEGG Orthology (KO) [BR:
ise00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ise03032
]
JBKA6_0243
03036 Chromosome and associated proteins [BR:
ise03036
]
JBKA6_0243
03400 DNA repair and recombination proteins [BR:
ise03400
]
JBKA6_0243
DNA replication proteins [BR:
ise03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
JBKA6_0243
Chromosome and associated proteins [BR:
ise03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
JBKA6_0243
DNA repair and recombination proteins [BR:
ise03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
JBKA6_0243
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_bac_2
PspA_IM30
Motif
Other DBs
NCBI-ProteinID:
BAV94256
UniProt:
A0A1J1E9Q0
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All DBs
Position
322779..323051
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AA seq
90 aa
AA seq
DB search
MNKSELIDAMASDTGSTKENAKKMLESFVSNVENTLSKGGKISLVGFGSFSTSKREAREG
RNPQTGQAIQIASKTVVKFKPGSELNNKVN
NT seq
273 nt
NT seq
+upstream
nt +downstream
nt
atgaataaatcagaacttatagatgcaatggcatcggatacaggatctactaaagaaaat
gcaaaaaaaatgttggagtcattcgtttctaatgtagaaaacactttatctaaaggaggt
aaaatatctttagtagggtttggttctttttctacttcaaagagagaggctagagaaggt
agaaatccccaaacaggacaagctatacagatagcttctaagactgttgttaagtttaag
cctgggtctgaacttaataacaaagtgaattaa
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