KEGG   Ichthyobacterium seriolicida: JBKA6_0243
Entry
JBKA6_0243        CDS       T05228                                 
Name
(GenBank) DNA-binding protein
  KO
K03530  DNA-binding protein HU-beta
Organism
ise  Ichthyobacterium seriolicida
Brite
KEGG Orthology (KO) [BR:ise00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:ise03032]
    JBKA6_0243
   03036 Chromosome and associated proteins [BR:ise03036]
    JBKA6_0243
   03400 DNA repair and recombination proteins [BR:ise03400]
    JBKA6_0243
DNA replication proteins [BR:ise03032]
 Prokaryotic type
  DNA Replication Initiation Factors
   Initiation factors (bacterial)
    JBKA6_0243
Chromosome and associated proteins [BR:ise03036]
 Prokaryotic type
  Nucleoid associated proteins
   HU (heat unstable protein)
    JBKA6_0243
DNA repair and recombination proteins [BR:ise03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHIIR (short-homology-independent illegitimate recombination)
     Supressor
      JBKA6_0243
SSDB
Motif
Pfam: Bac_DNA_binding HU-HIG HU-CCDC81_bac_2 PspA_IM30
Other DBs
NCBI-ProteinID: BAV94256
UniProt: A0A1J1E9Q0
LinkDB
Position
322779..323051
AA seq 90 aa
MNKSELIDAMASDTGSTKENAKKMLESFVSNVENTLSKGGKISLVGFGSFSTSKREAREG
RNPQTGQAIQIASKTVVKFKPGSELNNKVN
NT seq 273 nt   +upstreamnt  +downstreamnt
atgaataaatcagaacttatagatgcaatggcatcggatacaggatctactaaagaaaat
gcaaaaaaaatgttggagtcattcgtttctaatgtagaaaacactttatctaaaggaggt
aaaatatctttagtagggtttggttctttttctacttcaaagagagaggctagagaaggt
agaaatccccaaacaggacaagctatacagatagcttctaagactgttgttaagtttaag
cctgggtctgaacttaataacaaagtgaattaa

DBGET integrated database retrieval system