Ichthyobacterium seriolicida: JBKA6_0380
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Entry
JBKA6_0380 CDS
T05228
Name
(GenBank) heat shock protein 60 family chaperone GroEL
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
ise
Ichthyobacterium seriolicida
Pathway
ise03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ise00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
JBKA6_0380
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ise03019
]
JBKA6_0380
03110 Chaperones and folding catalysts [BR:
ise03110
]
JBKA6_0380
03029 Mitochondrial biogenesis [BR:
ise03029
]
JBKA6_0380
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ise04147
]
JBKA6_0380
Enzymes [BR:
ise01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
JBKA6_0380
Messenger RNA biogenesis [BR:
ise03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
JBKA6_0380
Chaperones and folding catalysts [BR:
ise03110
]
Heat shock proteins
HSP60 / Chaperonin
JBKA6_0380
Mitochondrial biogenesis [BR:
ise03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
JBKA6_0380
Exosome [BR:
ise04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
JBKA6_0380
Exosomal proteins of other body fluids (saliva and urine)
JBKA6_0380
Exosomal proteins of breast cancer cells
JBKA6_0380
Exosomal proteins of colorectal cancer cells
JBKA6_0380
Exosomal proteins of bladder cancer cells
JBKA6_0380
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
REF
CdaS_N
Motif
Other DBs
NCBI-ProteinID:
BAV94393
UniProt:
A0A1J1DX19
LinkDB
All DBs
Position
complement(512700..514331)
Genome browser
AA seq
543 aa
AA seq
DB search
MAKEIKFDVEAREKLKKGVDALSNAVKVTLGPKGRNVVAERSFGSPHVTKDGVSVAKEIE
LEDPIENMGAQMVKEVSSKTSDLAGDGTTTATVLAQSIVNTGLKNVAAGANPMDLKRGID
KAVEAISKDLDKQSKEIIGSFEEIQQVASISANNDLAIGSLIAESMKKVGTDGVITVEEA
KGTSTTVEVVEGMQFDRGYISPYFVTNSDKMQAELDNPYILLYDKKVSSMKDLLPILEAV
AQSGKPLLIIAEDVDGEALTTLVVNRIRGSLKIAAVKSPGFGDRRKEMLEDIAILTGGTV
VSEERGFTLDKATIEMLGTAEKVTIDKDNTIIVNGSGDEKAIKGRVGQIKTQIENTTSDY
DKEKLQERLAKLSGGVAVLYVGAASEIEMKEKKDRVDDALHATRAAVEEGIVAGGGVALL
RAKHVLKDLSLENEDEKTGVQIIERAIEEPLRQIVSNAGLEGSVIVSKVLEGKEDFGFDA
KTEEYVNMFKAGIIDPKKVTRIALENAASVAGMILTTECTITSIKENKADSMPPQMGGMP
GMM
NT seq
1632 nt
NT seq
+upstream
nt +downstream
nt
atggcaaaagaaataaagtttgatgttgaagctagagaaaaacttaaaaagggagttgac
gcccttagtaacgctgtaaaagttactttaggaccgaagggtaggaatgtggtagcagag
cgttcttttggatctccacatgtaaccaaagatggtgtttcagttgcaaaagaaatagaa
ttagaagatcctatagaaaacatgggcgctcagatggtaaaagaggtttcttctaaaact
agtgatttagcaggagatggaactactacagcgactgttttagctcaatctatagtgaat
actgggttgaagaacgtagctgcaggagctaatccaatggatctaaaaagaggtatagat
aaagctgttgaggctatatctaaagatttggacaaacaatcaaaagaaatcataggttct
tttgaagagatacaacaagtggcttctatttctgcaaataatgatttggctataggttct
ctaatagctgaatctatgaaaaaagtaggaactgatggagttataacagtagaagaagca
aagggaactagcactacagtagaagtggtagagggaatgcagttcgacagaggttatatc
tctccttatttcgtaaccaattcggataagatgcaagccgaactagataatccatatatc
ttattgtacgacaagaaagtgtcttctatgaaggatttacttcctattttggaagcagta
gcacaatcgggcaaacctctattgataatagcagaagatgtagacggcgaggctctaact
actttagttgtcaacagaataagaggatctctaaagatagcagcggttaaatcccctggt
ttcggtgataggagaaaagagatgttagaagacatagctatacttactggcgggactgta
gtttcagaagagagaggatttacattagataaggctactatagaaatgcttggaacagct
gaaaaagtgactatagacaaggataatactatcatagtaaacggatctggagatgaaaaa
gctatcaaaggcagggtaggtcagataaaaactcaaatagagaatactacttccgattac
gataaggagaaactacaagagcgtttggcaaaattatctggcggggtagctgttctttac
gtaggcgctgcatctgagatagagatgaaagagaaaaaggatcgtgttgatgacgcttta
cacgctactcgtgccgctgtagaggagggcattgtagctggaggtggagtagctctacta
agagcaaaacacgttttaaaagatctttcattagaaaatgaggatgaaaaaacaggggtt
caaattattgaaagagctattgaagaaccacttagacagatcgtatctaatgctgggttg
gaaggttctgtaatcgtttctaaggtccttgaaggaaaagaagactttggatttgacgct
aagacagaagagtatgtaaatatgtttaaagcgggaattatagatccgaaaaaagttact
agaatagcattggaaaatgcggcttctgtagctggtatgattctaactacagaatgtact
ataactagcataaaagagaataaggcagattctatgccacctcaaatgggaggcatgcct
ggaatgatgtaa
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