Ichthyobacterium seriolicida: JBKA6_0401
Help
Entry
JBKA6_0401 CDS
T05228
Name
(GenBank) tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA
KO
K03495
tRNA uridine 5-carboxymethylaminomethyl modification enzyme
Organism
ise
Ichthyobacterium seriolicida
Brite
KEGG Orthology (KO) [BR:
ise00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ise03016
]
JBKA6_0401
03036 Chromosome and associated proteins [BR:
ise03036
]
JBKA6_0401
Transfer RNA biogenesis [BR:
ise03016
]
Eukaryotic type
tRNA modification factors
Other tRNA modification factors
JBKA6_0401
Prokaryotic type
JBKA6_0401
Chromosome and associated proteins [BR:
ise03036
]
Prokaryotic type
Chromosome partitioning proteins
Other chromosome partitioning proteins
JBKA6_0401
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GIDA
SAM_GIDA_C
GIDA_C_1st
FAD_oxidored
Pyr_redox_2
AlaDh_PNT_C
DAO
FAD_binding_2
Pyr_redox
HI0933_like
Guanylin
Thi4
Motif
Other DBs
NCBI-ProteinID:
BAV94414
UniProt:
A0A1J1E527
LinkDB
All DBs
Position
complement(541598..543463)
Genome browser
AA seq
621 aa
AA seq
DB search
MFNEYDVIVVGAGHAGSEAAAAAANLGAKTLLVTMSLQNIAQMSCNPAIGGIAKGQIVRE
IDALGGQTGIVTDKTMVQFRMLNRSKGPAMWSPRAQSDRMRFAEEWRSTLERTKNLDFYQ
EKVSELLIKNNRVEGVKTSLGIEIKSKSVILTNGTFLNGIIHIGQDNFGGGRMGESSSKG
ITKQLISLGFVHGRMKTGTPPRVDARSLDFSKMEEQKGDENPGKFSFTKTPELKEQKSCF
ITYTNKNVHEILKTGFSKSPMFTNKIDGVGPRYCPSVEDKINRFSERERHQIFVEPEGWN
TVETYVNGFSTSLPKETQIEALKQIPGFEKVKIFRFGYAIEYDYFPPTQLLSTLETRITE
NLYFAGQINGTTGYEEAAAQGLMAGINAVKKIKDEAPFTLKRNEAYIGVLIDDLITKGTE
EPYRMFTSRAEYRILLRQDNADLRLTKLGHEIGLASTKRLKELDEKFDKINKTISFIKNK
SLEKDDINKLLKERESSPVNQKQKAASILSRPQINIDHMMGFCEINSFAEENNLNSEILE
QVEIQIKYEGYIDREKQNAEKLDRLEDIKIPSHFEYDKLPSLSSEAKEKLMKTQPKTIAQ
ASRISGVSPSDISILLVYMGR
NT seq
1866 nt
NT seq
+upstream
nt +downstream
nt
atgtttaacgaatacgatgtaatagttgtaggtgctggtcatgcaggatcagaggcagct
gcagctgcagcaaatctaggggctaaaaccctattggttactatgagtcttcaaaatata
gctcagatgtcttgtaatccagcaattggaggcatagcaaagggacaaatagtaagagaa
atagacgccttaggagggcagacggggatagtaacagacaaaacaatggtacagtttaga
atgttaaatagatctaaagggccagctatgtggagccctagagcacagtcagacaggatg
cgttttgcagaagaatggcgctcaactctagagagaactaaaaacttagacttttatcag
gaaaaggtttcagagctattaataaaaaataatagagtagaaggtgtaaaaactagctta
ggtatagagataaaatcaaaatctgtaatcctcactaacggaacttttttaaatggaatt
atacatataggacaagacaattttgggggaggtagaatgggggaatcttcatctaaagga
ataactaaacaactcatatctctgggctttgttcacggaagaatgaaaacgggaactcct
ccgagagtagacgctaggtctttagatttctctaagatggaagagcaaaaaggagatgaa
aacccaggaaaattttctttcacaaagactccggagttaaaagagcaaaaaagttgtttt
ataacttatacgaataaaaacgtacacgaaatactaaaaacaggtttttctaaatcccct
atgttcacaaataaaatagacggggtagggcctagatattgtccttctgtagaggataaa
ataaatagattttccgagagagagagacatcaaatattcgtagagcctgaaggctggaat
actgttgaaacctatgtaaatggcttttccacctctttgcctaaggagacacaaatagaa
gctctaaaacaaatacctggttttgaaaaggtaaaaatatttagatttggatatgctata
gaatacgattatttccctcccactcagcttctaagcaccctagagacgagaattacagaa
aacttatactttgctggacaaataaatgggactactggatatgaagaagcagcggctcaa
ggtttgatggctggaattaatgctgttaaaaagataaaagacgaagctccctttacatta
aaacgaaatgaagcttatattggagttttaatagatgatctgataacaaagggcacagag
gagccttatagaatgtttacctctagagcagaatacagaattctgttaagacaagataat
gcagatttaagacttaccaaattaggtcatgaaataggcttagcttctacaaaaagacta
aaagaattagatgagaaatttgacaagattaataaaactatatcatttattaaaaacaaa
agtctagaaaaagatgatattaataagttattaaaagagagagagtcatctccagtaaat
caaaagcaaaaagcggcaagtatcttatctagacctcagataaatatcgatcatatgatg
ggattctgtgaaatcaactcttttgcagaagagaataacctaaactctgaaatattagaa
caagttgaaattcaaattaaatacgaaggttatatagacagagaaaaacaaaatgctgaa
aaactagacaggctagaagatataaaaataccttctcatttcgaatatgataagctgcct
tctctgtctagtgaagctaaagaaaagttaatgaaaacacaacctaagactatagctcaa
gcatctagaattagtggggtatccccttcagacataagcattcttttggtttacatgggg
cgctaa
DBGET
integrated database retrieval system
