Ichthyobacterium seriolicida: JBKA6_0480
Help
Entry
JBKA6_0480 CDS
T05228
Name
(GenBank) Holliday junction DNA helicase RuvB
KO
K03551
holliday junction DNA helicase RuvB [EC:
5.6.2.4
]
Organism
ise
Ichthyobacterium seriolicida
Pathway
ise03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ise00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
JBKA6_0480
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ise03400
]
JBKA6_0480
Enzymes [BR:
ise01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
JBKA6_0480
DNA repair and recombination proteins [BR:
ise03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
JBKA6_0480
RecFOR pathway proteins
JBKA6_0480
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RuvB_N
AAA_lid_4
RuvB_C
AAA
AAA_5
AAA_16
AAA_22
Mg_chelatase
nSTAND3
AAA_3
AAA_14
RNA_helicase
AAA_24
Rad17
TIP49
NB-ARC
DUF815
NTPase_1
AAA_PrkA
NPHP3_N
AAA_18
AAA_33
Sigma54_activ_2
ABC_tran
NACHT
TsaE
Bac_DnaA
KAP_NTPase
AAA_19
AAA_28
AAA_7
AAA_17
AAA_11
Motif
Other DBs
NCBI-ProteinID:
BAV94493
UniProt:
A0A1J1E0N8
LinkDB
All DBs
Position
640058..641077
Genome browser
AA seq
339 aa
AA seq
DB search
MNRNITPNKEILTSRDIDSENKLRPQRFRDFVGQRQEIDNLEIFVKAANMRGDALDHVLL
HGPPGLGKTTLANILVNELNSSLKMSSGPVIDKPGDLAGLLTNLKERDVLFIDEIHRLSP
VVEEYLYSAMEDYRIDIMIESGPNSRSVQINLNPFTLIGATTRSGLLTAPMRDRFGIKCR
LQYYDKELLGHIIERSASILNISICEESTFEIAGRSRGTPRIANSLLRRVRDFAQIKGDG
TIDVSITKIALDSLNVDSAGLDEMDNKILTTIIDKFKGGPVGMSTIATAVSEEAGTIEEV
YEPFLIQEGYLIRTPRGREVTDMAYKHLGRIREGQQRLF
NT seq
1020 nt
NT seq
+upstream
nt +downstream
nt
atgaatcgtaatataactccaaataaggagattttgacctctagagatatagattcagaa
aataagctgcgtccacagaggtttagagattttgtaggtcaaagacaagagatagacaat
ttagagatatttgtaaaagccgccaatatgagaggtgatgctttagatcacgtcttatta
catggccctcctggtttgggtaagactactttagctaatattttagtcaatgaattaaat
tcatctttaaaaatgtcttctggtcctgttatagataaacctggagatttagctggacta
ttgacaaatctaaaagagagggatgttctatttatagacgagatacacagattatcgcca
gtagtagaagagtatttgtactctgctatggaagactacaggatagatatcatgatagaa
tcaggtccaaattctcgtagtgtgcagataaatttaaatccttttacccttataggtgct
actactcgttctggattactcacagctcccatgagagatagatttggaatcaaatgtaga
ctgcagtattacgacaaagagttgttagggcatattatagagagaagcgcatcgatattg
aacatttctatttgcgaagaatccacatttgagatagcgggcagaagtagaggaactcct
cgtattgccaattctcttttgagacgtgtaagagattttgctcagataaaaggagatgga
accatagatgtgagtataactaaaatagctttagactctctaaatgtagattctgctgga
ttagacgagatggacaacaaaattttgaccacgataatagataaatttaaaggaggacct
gtgggcatgtctactatagcgacagcagtgtcggaagaagcaggcactatagaggaggtg
tatgagccatttttaatacaagagggttatttaatccgtaccccaagggggagagaagtt
acagatatggcctataaacatttagggagaatacgagaggggcagcagaggttgttttaa
DBGET
integrated database retrieval system
