Ichthyobacterium seriolicida: JBKA6_0548
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Entry
JBKA6_0548 CDS
T05228
Name
(GenBank) hydroxymethylpyrimidine phosphate synthase thiC
KO
K03147
phosphomethylpyrimidine synthase [EC:
4.1.99.17
]
Organism
ise
Ichthyobacterium seriolicida
Pathway
ise00730
Thiamine metabolism
ise01100
Metabolic pathways
ise01240
Biosynthesis of cofactors
Brite
KEGG Orthology (KO) [BR:
ise00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00730 Thiamine metabolism
JBKA6_0548
Enzymes [BR:
ise01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.17 phosphomethylpyrimidine synthase
JBKA6_0548
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ThiC_Rad_SAM
ThiC-associated
Motif
Other DBs
NCBI-ProteinID:
BAV94561
UniProt:
A0A1J1DXK4
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Position
714273..716129
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AA seq
618 aa
AA seq
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MKRSNKIPTEASVSRAPFPSSKKIYVKGGIHDIEVAMREITLTSSNTDNSLGEQRKDTII
VYDTSGPYTDPDVDIDITTGLKRLRESWIRDRGDVDELSTPSSSYAAKVLNDGSKLYFKN
TNVPFRAKQGRNVSQMYYAKQGIITPEMEYVAIRENQKITEVREYVKQHPGNSFGAMIPS
EITPEFVRSEIAMGRAVLPSNINHPEMEPMIIGRNFLVKINANIGNSAVTSSIEEEVEKA
VWACRWGADTIMDLSTGKNIHETREWIIRNSPVPIGTVPIYQALEKVNGRAERLSWEIFK
DTLIEQAEQGVSYFTIHAGVLLRYIPLTANRVTGIVSRGGSIMAKWCLHHHKESFLYTHF
EDICEIMKAYDVAFSLGDGLRPGSLADANDKAQFKELETLGELTRIAHKHDVQTIIEGPG
HVPMHMIKENMDKQLKECNEAPFYTLGPLTTDIAPGYDHITSGIGAAMIGWYGCAMLCYV
TPKEHLGLPNKEDVKTGVITYKIAAHAADLAKGHPGAQVRDNAISKARFEFRWVDQFNLS
LDPDTARLFHDETLPAESAKVAHFCSMCGPHFCSMKISQDVRDYAKKKGLDTQEAIDKGL
KEKSLEFVEKGGNIYVDG
NT seq
1857 nt
NT seq
+upstream
nt +downstream
nt
atgaaaagatcaaataaaatacctacagaggcctcggttagcagagccccatttccttct
tccaaaaaaatttacgtaaagggtggtatacacgatatagaagttgccatgagggaaata
actttgactagttcaaatactgataattccttaggtgagcaacgcaaggataccatcatt
gtttatgatactagtggtccttatacagatcctgatgtagacatagacataactacaggt
ttgaaaaggttacgcgaaagttggataagggatagaggcgatgtagatgaattatctacc
ccttcctcttcttatgcagcaaaggtgttaaacgatggtagtaaactgtacttcaaaaac
acaaatgtccctttcagagcaaagcaagggaggaatgtgtcacagatgtattacgctaag
caagggattattacccctgaaatggaatacgtggctatacgcgaaaatcaaaaaattaca
gaggtcagggaatatgtgaaacagcaccctggcaatagttttggggctatgataccttct
gagataactccagaattcgttcgtagtgagatagccatgggtcgggcggtattgccgtca
aatataaatcatccagagatggagccaatgattattggcaggaattttctagtgaagatc
aatgctaacataggtaattctgctgtcacttctagcatagaggaagaggtagagaaggct
gtttgggcttgtaggtggggagcagatactatcatggatttatctactggaaaaaacata
catgagactagagagtggataataagaaactctcctgttccaataggaactgtgcctatt
tatcaggctttagaaaaggtaaatggaagagccgaaaggctttcttgggaaatattcaag
gatactcttatagagcaggcagaacagggagtctcttactttacaatacatgcaggagtg
ctattgaggtatattcccctcactgctaacagggtaactggaatagtatcgcgtggaggc
tctatcatggctaagtggtgcttacaccatcataaagaaagtttcttatacactcatttt
gaagatatatgtgaaattatgaaagcttatgatgtggctttttctttgggagatggattg
aggccagggtccttagctgatgctaacgataaagctcagtttaaggaattagaaacttta
ggagagttgacgcgtatagctcacaaacacgatgttcaaactattatagaagggcctggt
catgtgccaatgcatatgataaaggaaaatatggataagcagttaaaagagtgtaatgaa
gcgcctttttacactttaggtcctttgactacagatatagctcctggatatgatcatatt
acctctggtataggcgctgctatgatagggtggtatggatgcgctatgctttgttatgta
actcctaaggaacatttggggttaccaaataaggaagacgtcaagacaggggtaataacg
tataaaatagctgctcatgctgctgatttagctaagggtcatcctggggcgcaggtcaga
gataatgctataagtaaggctcgttttgaatttcgttgggtagatcaatttaacttgtct
ctagatcctgatactgctagattatttcacgatgaaactctacctgctgagagtgctaaa
gtagctcatttttgttctatgtgcggtccgcatttttgttctatgaagatctctcaggat
gttagggattatgcaaagaaaaagggattagatacacaggaggctatagataaaggctta
aaagagaagtctttagaatttgtagaaaaaggaggaaatatatatgtagatggttag
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