Ichthyobacterium seriolicida: JBKA6_0951
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Entry
JBKA6_0951 CDS
T05228
Name
(GenBank) DNA gyrase subunit A
KO
K02469
DNA gyrase subunit A [EC:
5.6.2.2
]
Organism
ise
Ichthyobacterium seriolicida
Brite
KEGG Orthology (KO) [BR:
ise00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ise03032
]
JBKA6_0951
03400 DNA repair and recombination proteins [BR:
ise03400
]
JBKA6_0951
Enzymes [BR:
ise01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
JBKA6_0951
DNA replication proteins [BR:
ise03032
]
Prokaryotic type
DNA Topoisomerases
JBKA6_0951
DNA repair and recombination proteins [BR:
ise03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
JBKA6_0951
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
DNA_gyraseA_C
Motif
Other DBs
NCBI-ProteinID:
BAV94964
UniProt:
A0A1J1E4I5
LinkDB
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Position
1230334..1232853
Genome browser
AA seq
839 aa
AA seq
DB search
MTDLPEQLISVNIVDEMKSAYIDYSMSVIVSRALPDVRDGLKPVHRRVLYGMYDLGVSSK
SAHKKSARIVGEVLGKYHPHGDSSVYDSMVRMAQEWSLRYTMVDGQGNFGSIDGDSPAAM
RYTEARLKKISEDILGELDKDTVDFQLNFDDTLKEPVVLPTRIPNLLVNGASGIAVGMAT
NMAPHNLTEVINAIIAYIKNIDISIPELMEYVKAPDFPTGGTIYGYDGVKEAYHTGKGRV
VLRAKVRTENIDGKDCLLVDEIPYQVNKSEMIKKTADLINDKKIEGISTIRDESDRNGMR
IVYVLKNNAIPEVILNHLYKYTALQTSFSINNIALVNGRPKLLNLKDLVVHFVEHRHEVV
VRRTKFELDQAEKKAHILAGLIIALDNLDAVIKLIRSSKSVESARSSLMESFSLSEIQAK
SILDMRLQKLTNLESAKIKDEYEELLKLLERLKNILSDESLRKAIIQEELEEVKEKYGDQ
RRSDIVYTSNIFKVEDMIPDEEVVVTISHAGYIKRTPLTEYRTQYRGGVGQKGVSIRDED
FLEHVYIATNHQYILFFTEKGRCHWLRVFEIPKGAKTSKGRPIQNLINIDPDDKIRAFIR
TDDLKDEEYVNSHYVIMVTKNGIVKKTSLEKYSRPRQNGINAITIQDNDRLLEAQLTNGK
SHVVLAGRSGKAVIFDESKIRASGRTSSGVKGITLKDDGDEAIGMVCVEDMNSEILVVSE
NGYGKRSKVEDYRITNRGAKGVKTISITDKTGGLIAIKNVNDENDLIVISKSGITIRMSV
EDIRIMGRNTQGVKVLNLKSKDVIASVTKVPKVNDEDNGNDQPSDINEGQSDINEEIKD
NT seq
2520 nt
NT seq
+upstream
nt +downstream
nt
atgacagatttacctgaacaattgatttcagtaaacatagttgatgaaatgaaatctgct
tacatagattattctatgtctgttatagtttctagggcattgcccgatgtgcgtgatgga
ttaaagccagtacacagaagggttctgtacgggatgtatgacttgggagtatcatcgaag
agtgcccataaaaaatctgctagaatagttggtgaggttttaggtaaataccaccctcat
ggcgattcttctgtttacgacagtatggtgaggatggctcaagaatggtctttgagatat
accatggtagacggccaaggtaactttggttctatagatggagatagccctgctgctatg
cgttatacagaggctcgtctgaaaaaaatatctgaggacatattaggagaattagataaa
gacactgttgatttccaacttaattttgatgacactctaaaagagcctgtagtattaccg
acgcgcatacctaatttgttagtaaacggagcttctggtatagcagtgggtatggctacg
aatatggcccctcataacctaacagaggtaataaatgccataattgcctatataaaaaat
atagatataagcattcctgaattgatggagtacgtaaaagctcctgattttcctactgga
ggtacaatatatggttatgatggagtaaaggaagcctatcacactggaaaggggagagtt
gttttaagggctaaagtaagaacagaaaatatagatggaaaagactgcttattggtagat
gaaataccttatcaagtaaataaatctgagatgatcaaaaaaacagcagatttaataaac
gataagaagatagaggggatttcaacaataagagatgagtctgatagaaatggaatgcgt
attgtatacgtgttgaaaaacaatgctatacctgaggtgatactaaaccacttgtataag
tacacagctctacagacctcttttagcataaataatatagctctagtaaatggtcgtcct
aagctattaaatttaaaagatttagtagttcactttgtggaacatagacatgaggtagta
gttagacgaactaaatttgaactagatcaagcagaaaaaaaagcacatattctagcaggt
ctgataatagcattagataatttagatgccgttataaaactcattagatcttcaaagagt
gtagaatcagctagaagtagtcttatggaatctttttctctatctgaaattcaagctaag
tctatcctagatatgcgtctgcagaagcttaccaacttagaatctgctaaaataaaggat
gaatacgaagaattactcaagctactagagcgacttaaaaacatattatcggacgagtca
ctgagaaaggctataatacaagaggagctagaggaagtaaaagaaaaatatggagatcag
aggagaagtgatatagtatacacgagtaatatcttcaaggtagaagatatgattccagat
gaagaagtagtagttactatctctcatgcaggatatataaagagaactccacttactgaa
tatagaacacaataccgaggaggcgtaggacaaaaaggagtgtctattagagatgaagac
ttcttagaacacgtttatatagctacgaatcaccagtatatattgtttttcacagaaaaa
ggtagatgccactggttaagggtattcgaaataccaaaaggggctaaaacatctaaggga
agacctatacaaaatttgataaatatagatcctgatgataagataagagcctttataaga
actgatgatctaaaagatgaagaatacgtaaacagtcattatgtcatcatggtgactaaa
aatgggatcgtaaaaaagacatctctagaaaagtattcacgtcctagacaaaatgggata
aacgcgataacaatacaagataacgatcgcttattagaggctcaactgacaaatggaaaa
agccatgtggtattggcaggaagatctggaaaggctgtgatatttgacgaatccaaaatt
cgcgctagtggacgaacaagttcgggagtaaagggtataactctaaaagatgatggggat
gaagctataggcatggtctgtgtagaagatatgaattccgaaatattagtggtttcagaa
aacgggtatggaaagcgatctaaagtagaagactatagaattaccaacagaggtgcaaag
ggcgttaaaactatttccataactgataaaacaggaggtttgatagctataaaaaatgtc
aatgatgagaatgatctaatagtaataagcaaatcgggaattacaattaggatgtctgtg
gaagacataaggataatgggcagaaatactcaaggagtgaaagttttaaacttgaaatca
aaagatgttatagcatctgttactaaagtgccaaaagtcaatgatgaggataatggaaat
gatcaaccaagcgatataaacgagggacaaagcgatataaacgaggaaataaaagactaa
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