Ichthyobacterium seriolicida: JBKA6_1103
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Entry
JBKA6_1103 CDS
T05228
Name
(GenBank) tRNA pseudouridine synthase A
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
ise
Ichthyobacterium seriolicida
Brite
KEGG Orthology (KO) [BR:
ise00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ise03016
]
JBKA6_1103
Enzymes [BR:
ise01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
JBKA6_1103
Transfer RNA biogenesis [BR:
ise03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
JBKA6_1103
Prokaryotic type
JBKA6_1103
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_1
DUF7045
Motif
Other DBs
NCBI-ProteinID:
BAV95116
UniProt:
A0A1J1E4Y2
LinkDB
All DBs
Position
1438796..1439554
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AA seq
252 aa
AA seq
DB search
MMRYFIEISYCGYDYCGWQIQPEQYTIQGIIEDRISKILGKQINIVGASRTDSGVHAKQT
FAHFDTDIIENIDKLVFKLNMFLPKDISIRNIFQVNADSHARFDATSRTYKYYISTVKNS
FTYNYTYQIYNFLLDIEKMNESCKVLLDYTDFKCFSKSNTDVFTYNCDITLAHWEKKEDL
LIFTIRSNRFLRNMVRAIVGTMMEISRDKITIDDLKNIIENSSNVSYSVPARGLYLTEID
YPKEIFKRNTIA
NT seq
759 nt
NT seq
+upstream
nt +downstream
nt
atgatgagatattttatagagatatcatactgtggatatgattattgtggatggcagata
caacctgagcaatatactatacaagggataatagaggataggattagtaaaatacttgga
aaacagataaatatagtaggagccagtagaacagattctggagtacatgccaaacagact
tttgctcatttcgatacggatataatagaaaatatagacaaattagtttttaagctcaat
atgtttttaccaaaggatatatctataagaaatatttttcaagtcaacgcagatagtcat
gctcgttttgatgctacgagtagaacttataaatattatatttcaactgtgaaaaactct
tttacgtataattatacgtatcagatatataattttcttctggatatagaaaagatgaat
gaatcttgtaaagttctattagattatactgattttaaatgtttttccaagtcaaataca
gatgtattcacttataactgtgatatcacattagctcattgggaaaaaaaagaagattta
ttaattttcactataagatcaaatagatttctcagaaatatggtgagagccatagtaggt
accatgatggaaattagtagagataaaatcacaattgatgatctgaaaaacataattgaa
aatagttctaatgtatcgtattctgttccagctagaggattgtatctcaccgagatagat
tatcctaaagaaatattcaaacgtaacactatcgcttaa
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