Ichthyobacterium seriolicida: JBKA6_1112
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Entry
JBKA6_1112 CDS
T05228
Name
(GenBank) alanine racemase
KO
K01798
Alr-MurF fusion protein [EC:
5.1.1.1
6.3.2.10
]
Organism
ise
Ichthyobacterium seriolicida
Pathway
ise00300
Lysine biosynthesis
ise00470
D-Amino acid metabolism
ise00550
Peptidoglycan biosynthesis
ise01100
Metabolic pathways
ise01502
Vancomycin resistance
Brite
KEGG Orthology (KO) [BR:
ise00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
JBKA6_1112
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
JBKA6_1112
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
JBKA6_1112
09160 Human Diseases
09175 Drug resistance: antimicrobial
01502 Vancomycin resistance
JBKA6_1112
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
ise01011
]
JBKA6_1112
Enzymes [BR:
ise01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.1 alanine racemase
JBKA6_1112
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.10 UDP-N-acetylmuramoyl-tripeptide---D-alanyl-D-alanine ligase
JBKA6_1112
Peptidoglycan biosynthesis and degradation proteins [BR:
ise01011
]
Precursor biosynthesis
Amino acid ligase
JBKA6_1112
Racemase
JBKA6_1112
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ala_racemase_N
Ala_racemase_C
Mur_ligase_M
ExbD
bPH_7
Mur_ligase
Motif
Other DBs
NCBI-ProteinID:
BAV95125
UniProt:
A0A1J1E2E5
LinkDB
All DBs
Position
complement(1454099..1456579)
Genome browser
AA seq
826 aa
AA seq
DB search
MIQEVYSDTIHYDIDIISKIICAQSHIGSDKKEINKITTDSRQWDNDSTSLFFALNTQND
DGHNYIKSAYNQGVRNFVVEKLDCKIPNANFLLVKDVLTSLQNLAVFHREKFNIPIIGIT
GSGGKTTVKEWLYQILKERFNTVISPNSYNSQTGVPLSIWEIKHNHKLGVFEAGISNIGE
MEKLEKIISPTIGIFTNIGDKHSENFTCIEQKIHEKLKLFKNSKTVIVPFDDKLILNEIL
KSNIKRESLLTWGYNKGADLQILKLNKLKNSSNVFLNFRGSNYKIILPFKDDFSIENAIQ
VLLTSLYLGIDLNYLKEKFAQLSISKMRLEQFRAKQNCIVINDNYTLDFHSFKIALNKLN
NFPKKKKTLIISDIHIQGNQKVVYENIFSLIDSCSLHRIFTIGKNIDKYTHLFNGSIMNF
KNTKSFLEWVKDDSFSDEVILLKGDRSFNLKKISKVLEDKKHNTILEINLSSLVQNLDLY
RSFLKKETKVMAMVKAFSYGSGSYEIAQALQFHRIDYLAVAYVDEGISLRNNGITTPILV
LNPEYNSYKALIEHDLEPEIYTFDAWKKIAQIIRRHSNKAPYPIHLKLDTGMHRLGFESK
DINKICEYINDYKELKIKSVFSHLAESDKLNSDFTEKQINLFKDLSDRIQKVVKYPIIKH
ILNSSGIINYPSAHFDMVRLGIGLYGVSNELDIRNKSSNVFNLNTVISQIKNIKKNETIG
YNRSFLAKKNIRIATLPIGYADGINTHLSNGKGYVIINNKKAEIVGRICMDMMMVDISDI
QCYQGDSVEIFGQNISISEIAEKLNTISYEVLTSISTRVKRVYVYD
NT seq
2481 nt
NT seq
+upstream
nt +downstream
nt
atgattcaagaagtatacagtgatacaattcattacgatatagatattatatcaaaaata
atatgtgcccaatctcatataggaagtgataaaaaagaaataaataaaataactactgac
agtcgtcaatgggataatgatagcactagtctattttttgctttaaacacccaaaatgac
gacggacataattatataaagagtgcatataaccaaggggttagaaattttgtagtagaa
aaactagactgtaaaataccaaacgctaattttttattagtaaaggatgtattgacatct
cttcaaaatttagctgtattccatagggaaaaatttaatattccaattataggaataact
ggtagtggtggaaaaactacagtaaaagaatggctctatcaaatattaaaggaacgattc
aatacggttataagtcccaatagttataattctcaaacaggggtccctttgtcgatatgg
gagattaaacacaatcataaactaggtgttttcgaggcaggcatctctaatataggagag
atggaaaaacttgaaaaaataatatctcctacaatagggatatttaccaatataggtgat
aaacactccgaaaatttcacttgtatagaacaaaaaatacatgagaaattaaaacttttc
aaaaattctaaaacagtcatagtaccatttgatgacaaactgatactaaatgaaatttta
aaatcaaatataaaaagagaatcattactcacgtggggatacaataaaggagctgattta
caaatactcaaattaaataaattaaaaaattcatctaacgtatttctaaattttaggggt
tctaattataaaataatccttcctttcaaagatgatttttctatagaaaatgcaatacaa
gttttgctcacatccctatatctaggtatagaccttaactatttaaaagaaaaatttgct
caactttccatatctaaaatgagattagagcaatttagagcaaagcaaaattgtattgtg
ataaatgacaattacaccctagattttcactcgtttaagatagctttgaataaactgaat
aattttcctaaaaaaaagaaaacacttatcatatcagatattcatattcaaggaaatcaa
aaggtcgtatacgaaaatatatttagtttgatagactcttgcagtctacatagaattttt
accataggtaaaaatatcgataaatatacccatctattcaatggctcgataatgaatttt
aagaatacaaaatcatttttagagtgggtaaaagacgactctttttccgatgaagtgatc
ttattaaaaggagatagaagttttaatttaaaaaaaatatctaaagtattagaggataaa
aaacacaacactattttagagataaacttaagtagtttagtacaaaacttagatttatac
aggagtttcttaaaaaaagagactaaagtaatggctatggtaaaagccttttcttacggt
agtggaagctatgaaatagcccaagccttacaatttcacaggatagattatttagctgta
gcttatgtggatgagggaatatctttgagaaataacggtataactactcctattttagtt
ttaaacccagaatacaacagctataaggctttgatagaacatgacttagaacctgaaatc
tatacttttgacgcttggaaaaaaattgcacaaattataagaagacattctaataaagct
ccttaccctattcatctcaagttagatactggaatgcatagattaggatttgaatctaaa
gacataaataaaatttgtgagtatataaacgattataaagaattaaaaattaaatctgta
ttctctcatcttgcagagagtgataaactaaattcagattttacagaaaagcagataaat
ttatttaaagatctatctgacaggatacagaaagttgtaaaatacccaattatcaaacat
attttgaattcatcgggaataataaattatccatctgcgcatttcgatatggttagactc
ggtataggtctatacggagtatccaacgaacttgatattagaaataaatctagtaatgtt
tttaatttaaacactgtaatatctcagattaagaatataaagaaaaatgagactataggt
tataataggagttttttagcaaaaaaaaatatacgtatagccactctacctataggatat
gcagatggtataaatactcatctgagtaatggcaaaggttatgttattataaataataaa
aaagctgaaatagtaggaaggatatgtatggatatgatgatggtcgacatttctgatatt
cagtgttatcaaggcgatagtgtagagatatttggtcaaaatatcagcataagtgaaata
gctgaaaaattaaatactataagttacgaagtattaacaagtatatctactagggtgaaa
agagtatatgtatacgattaa
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