Ichthyobacterium seriolicida: JBKA6_1115
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Entry
JBKA6_1115 CDS
T05228
Name
(GenBank) multidrug ABC transporter ATPase and permease
KO
K11085
ATP-binding cassette, subfamily B, bacterial MsbA [EC:
7.5.2.6
]
Organism
ise
Ichthyobacterium seriolicida
Pathway
ise02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
ise00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
JBKA6_1115
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ise02000
]
JBKA6_1115
Enzymes [BR:
ise01000
]
7. Translocases
7.5 Catalysing the translocation of carbohydrates and their derivatives
7.5.2 Linked to the hydrolysis of a nucleoside triphosphate
7.5.2.6 ABC-type lipid A-core oligosaccharide transporter
JBKA6_1115
Transporters [BR:
ise02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB-BAC subgroup
JBKA6_1115
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
RsgA_GTPase
nSTAND1
AAA_22
AAA_24
AAA_29
DUF2291
DUF815
Zeta_toxin
ATP-synt_ab
AAA_16
Motif
Other DBs
NCBI-ProteinID:
BAV95128
UniProt:
A0A1J1EC92
LinkDB
All DBs
Position
complement(1459195..1461021)
Genome browser
AA seq
608 aa
AA seq
DB search
MKNLFKVLKIAKPYKIEIFCVFLFGLLVILFSLFSLATLIPILKVLINNVEPILEIPVYK
GILDIKNFLEKTINYNIYNSIIQNGKIKVLEITCIFAGAAFVLKNIFRYFASMFAVKIRN
TIERDIRNKLYKKILNLHIGYFSDKNRGDLISHFTTDIVEIQNAILNSISMIFKDPIMII
ASLIILFIMSPQLTIFVLVTMPIGIIIISFVGKNLKKIASKEKSQQDKLLSILDETISGI
SIVKAFVSEKRTYDKFLKSNHIDYKLKNSVMFRREMSSPISEVIGSFIIILIIWFGGKLI
LEQQSLEPEIFITYLMFFYQIIPHSKSISTAFYDIRRASASVDRIWNVLYTKNEIKDSES
SIEINDFKDEIVFDSISFSYGREDLIKEFSLTIKKGQNIALVGKSGGGKSTLIKLLPRFY
DIEKGNIYLDKTDIRDIKKHSLRSLIAMVTQDSILFNDTVYNNITMGLDTYTQQEVINAA
KVANAHEFITQLKYGYQTNIGQGGNKLSGGQKQRLCIARAILKNPPIMLLDEATSSLDAE
SEIHLQKALDNIIKEKTSIIVAHRLSTIQRADIIVVIEKGRIVEKGSHRDLLDKKSVYHK
LIQLQSFD
NT seq
1827 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaacctatttaaggtattgaaaatagctaaaccttataaaatagagatattctgt
gtgtttctatttggcttgctcgtgatattattttcacttttttccttagccactttgatt
ccaattttgaaagtactcataaataatgtagaaccaatattagaaatacctgtttacaag
ggaattttagacataaaaaattttttagaaaaaacaattaactataacatatacaattca
ataattcaaaatggtaaaataaaagtactagagataacatgtatttttgcgggcgctgcc
tttgtattaaaaaatatatttagatattttgcctccatgtttgcagttaaaatacgtaat
accatagagcgagacataaggaataaactctataagaaaatattaaacctacacatagga
tatttttctgataaaaataggggcgatctaatatctcattttacaactgatatagtagag
atacaaaatgctattttgaattctataagtatgattttcaaagatcctataatgataata
gcatcattgataattctatttattatgagtcctcaactcacaatatttgtattagttact
atgcctatagggattatcattattagttttgtaggcaaaaatttaaaaaagatagcatca
aaagaaaagtcacaacaggataaactcctatccatattagatgaaacaatatctggaata
tcaattgtaaaagcatttgtatcggaaaaaagaacatacgataaatttctaaaaagcaat
catatcgattataaactgaaaaattctgtgatgtttaggagagagatgtcttctcctata
agcgaagttataggatcctttataataatattgataatatggtttggtggaaaattaata
ttagaacaacagagtttagagcctgagatatttataacctatttgatgtttttttatcaa
atcattcctcattcaaaatctatttctacagctttttacgacataagaagagcaagcgcc
tcggtagacagaatatggaatgtattatacacaaaaaacgaaataaaagacagtgagagc
tcaatagaaataaatgactttaaagatgaaatagtcttcgacagtataagtttctcatat
ggaagggaagatcttataaaagagttttctctcactataaaaaaaggacaaaacatagca
ttagtaggaaagtctggagggggaaaatctacattgataaagcttttgccaaggttttac
gacatagaaaagggaaatatatatttagataaaactgatataagagatataaaaaagcac
agtttgagaagcttaatagcaatggtgacacaagattccatattatttaatgatactgtg
tataacaatatcacaatgggtttagacacctacacacaacaagaagttataaatgctgca
aaagttgccaatgctcatgaatttatcactcagctcaaatatggataccagactaatata
gggcaaggaggcaacaaactatctggtggacaaaaacagagattatgtatagctagagct
atattaaaaaatccacctattatgttattagacgaagctacatcatctctagacgcagaa
tctgaaatacatttgcaaaaagcattagataacataataaaggaaaaaacctcaataata
gtagctcatcgtttgtcgactatacaaagagctgatatcatagtagttatagaaaaagga
cgaatagtagaaaaaggaagtcatcgagatttgctagataaaaaatcggtatatcacaaa
ttaattcaattacagtcttttgattga
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