Ichthyobacterium seriolicida: JBKA6_1167
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Entry
JBKA6_1167 CDS
T05228
Name
(GenBank) uracil-DNA glycosylase, family 1
KO
K03648
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
ise
Ichthyobacterium seriolicida
Pathway
ise03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
ise00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
JBKA6_1167
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ise03400
]
JBKA6_1167
Enzymes [BR:
ise01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
JBKA6_1167
DNA repair and recombination proteins [BR:
ise03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
JBKA6_1167
Prokaryotic type
JBKA6_1167
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-ProteinID:
BAV95180
UniProt:
A0A1J1E546
LinkDB
All DBs
Position
complement(1518556..1519218)
Genome browser
AA seq
220 aa
AA seq
DB search
MFVKINPSWKKHLNDEFEKPYFKKLIEFVKDEYSKHRVYPNGKEIFSAFDKCCFEDTRIV
ILGQDPYHGPNQANGLCFSVKKGIPLPPSLQNIFKEIKDDLGIDIPNHGDLEHWAKQGIL
LLNSILTVRDGMPGSHQNKGWEIFTDAVIKIINEKKRDVVFMLWGAYAQKKAHFIDREKH
FVLSSTHPSPLSAHRGFLGCKHFSNANNYLKSKNTKCINW
NT seq
663 nt
NT seq
+upstream
nt +downstream
nt
atgtttgtaaaaatcaatccatcgtggaaaaaacatttaaatgacgaatttgaaaagcct
tatttcaaaaaactaatcgaattcgttaaagatgaatacagcaagcatagggtttatcca
aatggcaaagaaatcttcagtgcttttgacaaatgttgcttcgaagatactagaatagtt
atcttaggtcaagatccatatcatggacctaatcaggctaatggattgtgtttttcggta
aaaaagggtattcccctccccccttcacttcaaaatatttttaaagaaataaaagacgat
ctaggaatagatattcccaatcacggagatttagaacattgggctaaacagggaatatta
ctcttaaattccatattaactgtaagggatggaatgcctggctctcatcaaaataaagga
tgggaaatatttaccgatgcggtaataaaaattataaatgaaaaaaaaagagatgttgta
tttatgttgtggggagcttatgctcaaaaaaaagcacatttcatagatagagaaaaacat
ttcgtactgtcatctactcacccctctcccctatctgcacatagaggatttctaggatgc
aagcattttagcaatgctaataattatctaaaatctaaaaacacaaaatgtataaactgg
taa
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