Ichthyobacterium seriolicida: JBKA6_1249
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Entry
JBKA6_1249 CDS
T05228
Name
(GenBank) hypothetical protein
Organism
ise
Ichthyobacterium seriolicida
Brite
Glycosaminoglycan binding proteins [BR:
ise00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
JBKA6_1249
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Collagen
Phage_fiber_rpt
Peptidase_S74
Tropomyosin
TMF_DNA_bd
Lebercilin
Motif
Other DBs
NCBI-ProteinID:
BAV95262
UniProt:
A0A1J1E7G0
LinkDB
All DBs
Position
complement(1608880..1612488)
Genome browser
AA seq
1202 aa
AA seq
DB search
MTIRIVFYFGFIFLSFLSIDSLSNNFPNKLSYQLVIRKDDKLLRESTVSIRISIYSLNGK
IEDVVYSEVHWNIKTDKNGLATLKVGEGIRSQGFSGSKLSDLSWSEYSYYIKSEIDLTGK
NNYSNALIKKSEILSVPYAFYAAKSPKTNVIDNLRSRVVSSALSANKGRDLEERKLDKID
IADNFDGEVGKVLSAKKGKELYERVNKFETKIKEQEKELTEHDNKLTDQETKIKKLKDGE
LEVINDLTLSTHGPKKVLSAHQGYLLKQMIDDKKAEKGEKGDRGEIGPAGPAGPAGPNGK
TGPVGVAGPQGKQGDRGIPGETGSAGPPGKDGEQGEKGEQGERGPAGPDGKRGDIGIQGV
PGPKGTDGKDGNPGPKGDRGEQGLKGEDGAPGPIGLAGPAGPPGATGAVGPAGPAGKNGI
DGKKGDQGMQGSEGPPGKDGKEGKQGPPGPPGPPGPAGAKGETGAQGPRGYTGVKGPQGT
RGEKGKDGDPGLAGRDGKDGPAGPAGPAGPQGKQGEKGEQGERGPAGPDGKRGDIGIQGV
PGPKGTDGKDGNPGPKGDRGEQGLKGEDGAPGSIGLAGPPGAAGAVGPAGPAGKNGIDGK
KGDQGMQGSEGPPGKDGKEGKQGPPGLAGAKGETGAQGPPGPAGAKGETGAEGPPGPAGP
KGADGNHGVDGKDGESGLPGPAGPAGAPGARGPQGLPGPAGAKGPQGPPGPEKIINNLTS
GDTTSALSAKQGKVLDDKIKKSFLFVEGGMNRRNGNIITCWSGNKSNCDEVASNSRGYRN
MFLGTNSGTRAMVSDNVVIGANILSKIGDNSNSNVGIGSNVFLNTTTVSNTVAIGYNAAA
LVKHSNRSIFIGHGSSSGEGNRSINEIVIGASNADIPNKGKGSNTVLIGNDNTIETYLKG
RVLINNNSSAIRKNIGMLNINGGTSNRFSGTYFDYDHDYYLKKTARYKFIDTKVSLYAGE
SILTDNKFLAVSDKRIKSIKGISDKREDLKKLLDIEITDYTMIDSIKSGVRPFKKVIAQQ
VESIVPEIININEGTIPNVYELAKSINISNEGSTITTNKVHDFSVGDLIKVIIENDGERY
VKVKRVIDSNRFLTEEVLDSKNKVFIYGKEVDDLRSIDYDGLTTLNISATQAVYDRVVGL
EKENSILTKQLSTTNEKLSATEEKLSAIEEKLSSTQKKLDILIKVLSKSDVLSKEDIKVL
IK
NT seq
3609 nt
NT seq
+upstream
nt +downstream
nt
atgactataagaattgttttttattttggatttatatttctctcatttttaagtatagat
tctctttctaataattttcctaataagttgagttatcagttagtgattaggaaagatgat
aaactattaagagaatctacagttagtattcgtatttctatatattctttaaatggaaag
atagaagatgttgtatactctgaagttcattggaatattaaaacagataagaatggctta
gctactctaaaggtaggagaaggtattagatctcaaggattctcaggttcaaaattgtct
gatttatcatggtctgagtattcatattacattaaatcagagatagatctgactggcaaa
aataattatagtaatgctcttataaaaaagagtgaaatacttagtgttccttacgcattt
tatgctgcaaaaagcccaaaaacaaatgttatagataatttgagatctagagttgtatca
tctgctctatcagctaataaagggagagatttggaagaaagaaaattagacaaaatagat
attgctgataattttgatggagaggttggaaaagttttatcagctaaaaagggaaaagaa
ctttatgaaagagtaaataaatttgagaccaagataaaagaacaggaaaaggagttaact
gaacatgataataaattaacagatcaagaaacaaaaattaaaaagttaaaggatggagag
ttagaagttattaatgatttgacactttcaactcatggccctaaaaaagttttatcagcg
catcaaggatatctgcttaagcagatgatagacgacaaaaaagcagaaaagggagagaaa
ggagatcgaggcgagataggtcctgcaggccctgcaggaccagcaggaccaaatggtaaa
acaggaccagtaggtgtagcagggcctcaaggaaaacaaggtgatcgagggattccaggt
gaaacaggctcagcgggcccccctggtaaagatggagaacaaggtgaaaaaggagagcaa
ggtgaaagaggtccagcaggaccagatggcaaacgaggtgacataggtattcaaggagtt
cctggtccaaaaggtactgatggtaaagatggtaatccaggaccaaaaggagacagagga
gagcaagggttaaaaggtgaagatggagcaccaggcccaatcggtctggcaggccccgct
gggcccccaggagctacaggggcagtaggtccagctggtcctgctggtaaaaatggtatt
gacgggaaaaaaggagatcaagggatgcaaggttcagaaggtcctcctggtaaagatgga
aaagaaggcaagcaaggtcctccaggtcctccaggtcctccaggtccagcaggagcaaaa
ggtgaaacaggagcgcaaggacctcgaggatacacaggggtaaaaggtcctcaaggtacc
agaggcgaaaagggcaaagatggtgatccaggccttgctggtagagatggcaaggatggt
ccagcaggaccagcagggccagcaggacctcaagggaaacaaggtgaaaaaggagagcaa
ggtgaaagaggtccagcaggaccagatggcaaacgaggtgacataggtattcaaggagtt
cctggtccaaaaggtactgatggtaaagatggtaatccaggaccaaaaggagacagagga
gagcaagggttaaaaggtgaagatggagcaccaggctcaatcggtctggcaggcccccca
ggagctgcaggggcagtaggtccagctggtcctgctggtaaaaatggtattgacgggaaa
aaaggagatcaagggatgcaaggttcagaaggccctcctggtaaagatggaaaagaaggc
aagcaaggtcctccaggtctagcaggagcaaaaggtgaaacaggagcgcaaggacctcca
ggtccagcaggagcaaaaggtgaaacaggagcggaagggcctccaggcccagcaggacca
aaaggtgcagatggtaatcatggtgtagatggcaaggatggtgaatcaggtttaccaggc
ccagcgggtccagcaggagccccaggcgctagaggtccacaaggtttaccaggcccagca
ggagctaaaggtccacaaggtcctccagggccagagaaaattataaataatttaacttct
ggggatacaacaagtgccttatcagctaaacagggtaaggttttagatgacaaaataaaa
aaatcatttctttttgtagaaggaggtatgaatcgtaggaatggtaatattataacgtgt
tggtctggtaataaaagtaattgtgatgaagtagcttctaactctagaggatatagaaat
atgtttttaggtaccaattcaggaactagggctatggtgagtgataatgtagttattggg
gctaatattttatctaagattggtgataattctaatagtaatgtaggtataggctctaat
gtatttttgaatactacaacagtatctaatactgtagctattgggtataatgcagccgct
cttgttaagcattcaaatcgctctatttttatagggcatggatcaagttctggagaaggc
aacagatctattaatgagatagttattggagcatctaatgcagacatacctaataaaggt
aaaggtagtaatacagtacttatcgggaatgacaatactatagaaacatacttaaagggg
agagttttaataaataataatagttcagcaatacgaaaaaatattggaatgttgaatatc
aatggaggaaccagcaatcgttttagtggaacttattttgattatgatcatgattattat
ttgaaaaaaacagctagatacaaattcattgatactaaagtttctctgtatgcaggtgaa
tctattttaacagacaataaatttttagctgtatcagacaaacgtatcaagagtataaaa
ggtatctcagataaaagagaagatttaaagaaactcttggatatagaaattacagattat
acgatgatagatagtataaaaagtggcgttagaccatttaaaaaagtaatagctcagcag
gtagaaagtatagttccagagatcataaatataaatgaaggtactatccctaatgtgtat
gaattagctaaatcaatcaacatttctaatgaaggaagtactatcacgacaaacaaggtt
cacgatttttctgttggagatctcattaaggttattatagaaaatgatggagagagatac
gtaaaagtaaagagagttatagattctaatagatttttaacagaagaggttttagattct
aaaaataaggttttcatctacggtaaggaggtagacgatttacgctcaatagattacgat
ggtcttactactttaaacatttcagctactcaagcagtttatgatcgtgttgtgggttta
gaaaaagagaatagtattcttactaaacaactttctactaccaatgaaaaactttctgct
actgaggaaaaactttctgctattgaggaaaaactttctagtactcaaaagaaattagat
attttaattaaagtattaagtaaatcagatgtccttagtaaggaagatatcaaagttttg
ataaaataa
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