Ichthyobacterium seriolicida: JBKA6_1251
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Entry
JBKA6_1251 CDS
T05228
Name
(GenBank) collagen triple helix repeat protein
Organism
ise
Ichthyobacterium seriolicida
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Collagen
Phage_fiber_rpt
Motif
Other DBs
NCBI-ProteinID:
BAV95264
UniProt:
A0A1J1ECN9
LinkDB
All DBs
Position
complement(1613550..1617086)
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AA seq
1178 aa
AA seq
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MKRRLVFYFGFIFLLFLSVDSISKNFPNKLSYQLVIRKDDKLLRESTVSIRISIYSLNGK
IEDVVYSEVHWSVKTDKNGLATLNIGEGIRSQGFSDSKLSDLSWSEDSYYIKSELDLTGK
NNYSNALIKKSQLFSVPYAFYAADSPKTNVIDNLSSRVVSAALSANKGRDLEERKLDKID
IADNFNGGKGKVLSADRGKELYERVDKSETKIKKQEKELTAKKAELKNKIDNNQIINNLT
TDDATKVLSAAQGKVLKAEIDTKLSISDIVNDLNTDTHDPKKVLSAHQGYELKKLIDKKA
ERGPQGVKGDSGAKGEAGPSGPQGPKGEQGDTGPAGPSGEKGDVGAQGPKGDPGPKGDPG
PSGPTGAPGTPGKDGAAGLTGPMGPAGPAGPAGPAGPAGPAGPAGPAGPAGSQGEKGPQG
LKGEDGVAGETGPAGPPGATGAVGPTGRDGAAGKQGPQGPRGPQGAPGATGIQGDRGETG
PPGLSGPAGADGKNGERGERGPQGEQGPKGEKGETGAPGPTGVRGEQGERGPAGEKGDVG
AQGPKGDPGPKGDPGPSGPTGAPGTPGKDGAAGLTGPMGPAGLAGAIGPQGVKGDSGAKG
EAGPSGPQGPKGEQGDTGPAGPKGEKGDAGDQGDQGPKGDAGETGAPGPAGSQGPVGVAG
PKGEKGEKGPQGLKGEDGVAGETGPAGPPGATGAVGPAGRDGAAGKQGPQGPRGPQGAPG
ATGIQGDRGETGPPGPSGPPGPSGPPGADGTNGKDGEKGDVGAQGPKGDQGPIGNTGATG
PIGPTGAPGIPGKDGAAGLTGPMGPAGPAGSQGPVGVAGPAGPKGEKGEKGPQGPQGDKG
LPGADGKDGNPGDPGPKGEQGIPGPVGPAGLAGKDGERGERGPAGIQGPQGLRGETGPAG
AIGPQGVKGDPGPKGEQGPAGKDGEPGLPGLPGNPGLAGPKGADGKDGESGLPGPQGLPG
PQGLPGPAGLAGAPGAKGPQGPPGPAGPAGAPGPEKIINDLTSGDTTSALSAKQGKVLND
DIKRSRLFVEGGNGNGNGNIITCWSGNKDRYDEIVSNSIGTRNMFLGINSGNDGKFSTTH
NVAIGDNTLSSISNGSNSNVAIGSRVFQAAARVSNTVAIGHTAAAYANQLNRSIFIGHGS
APKENSSSSNEIVKHLLEMYLIKVKVIIQYLLGMTTLK
NT seq
3537 nt
NT seq
+upstream
nt +downstream
nt
atgaaaagaaggcttgtgttttactttggatttatatttctgctgtttctgagtgtagat
tccatttctaaaaactttcctaataagttgagttatcagttagttattaggaaagatgat
aaactattaagagaatctacagttagtattcgtatttctatatattctttaaatggaaag
atagaagatgttgtatactctgaagttcattggagtgttaaaacagataaaaatggttta
gctactctaaatataggagaaggtattagatctcaagggttttcagattcaaaattgtct
gatttatcatggtctgaagattcatattacattaaatcagagttagatttgactggcaaa
aataattatagtaatgctcttataaaaaagagtcaattatttagtgtcccttatgcattt
tatgcagcagatagcccaaaaacaaatgttatagataatttgagttctagagttgtatca
gctgctttatcagctaataaagggagagatttagaagaaagaaaattagacaaaatagat
attgctgataattttaatggaggtaaaggtaaagttttatcagctgatagaggcaaggag
ctttatgaaagggtagataaatctgagactaagataaaaaaacaggaaaaggagttaacc
gctaagaaggcagagttaaaaaacaagattgataataatcaaataataaataatttaacc
actgatgatgctacaaaagtattatcagcagcacaaggaaaagtccttaaggcagaaata
gatactaaattaagtatatctgatattgttaatgatttaaacaccgacactcatgaccct
aaaaaagttttatcagcgcatcaagggtatgaactcaagaaattgatagacaaaaaggca
gaaagaggccctcaaggagtaaagggagactcaggagcaaaaggtgaagcaggaccatca
ggtcctcaaggaccaaaaggagagcaaggagacacaggtccagcaggtccatctggtgaa
aaaggagacgttggtgctcaaggaccaaaaggagacccaggaccaaaaggtgatccaggt
ccatcagggccaacgggagcccctgggaccccaggtaaagatggcgcagcaggtctgact
ggtccaatgggtccagcaggtccagcaggtccagcaggtccagcaggtccagcaggtcca
gcaggtccagcaggtccagcaggtccagcagggtctcaaggtgaaaaaggtcctcaaggg
ctaaaaggtgaagatggagtagcgggggaaaccggcccggcagggcccccaggcgctaca
ggggcagtcggtcctactggtagagatggagcagcaggaaaacaaggccctcaagggcct
agaggtccacagggtgccccaggtgcaacaggaatacaaggtgataggggcgaaacaggg
cctccaggactatcaggcccagcaggtgctgatggcaaaaatggagaaagaggagaaaga
ggtccccaaggtgaacaaggaccaaaaggtgaaaaaggtgaaacaggagccccaggtcca
acaggcgttagaggagagcaaggtgaaagaggaccagctggtgaaaaaggagacgttggt
gctcaaggaccaaaaggagacccaggaccaaaaggtgatccaggtccatcagggccaacg
ggagcccctgggactccaggtaaagatggcgcagcaggtctgactggtccaatgggtcca
gcaggtctagcaggagcaataggccctcaaggagtaaagggagactcaggagcaaaaggt
gaagcaggaccatcaggtcctcaaggaccaaaaggagagcaaggagacacaggaccagca
ggtccaaaaggggaaaaaggagacgctggtgatcaaggagatcaaggaccaaaaggagac
gctggtgaaacaggagccccaggtccagcagggtctcaagggccagtaggtgtagcaggg
cctaaaggtgaaaaaggtgaaaaagggcctcaagggctaaaaggtgaagatggagtagcg
ggggaaactggcccggcaggacccccaggcgctacaggggcagtcggtcctgctggtaga
gatggagcagcaggaaaacaaggccctcaagggcctagaggtccacagggtgccccaggt
gcaacaggaatacaaggtgataggggcgaaacagggcctccaggaccatcaggccctcca
ggaccatcaggccctccaggtgctgatggcactaatggtaaagatggtgaaaaaggagac
gttggtgctcaaggaccaaaaggagaccaaggaccaataggtaatacgggagctacaggt
cctataggcccaacgggagcccctgggatcccaggtaaagatggcgcagcaggtctgact
ggtccaatgggtccagcaggtccagcagggtctcaagggccagtaggtgtagcaggtcca
gcagggcctaaaggtgaaaaaggtgaaaaaggccctcaagggccacaaggtgataaaggc
cttccaggtgctgatggtaaagatggtaacccaggagacccagggccaaaaggggaacaa
ggtattccagggccagtaggcccagctggtcttgcaggtaaagatggagaaagaggagaa
agaggtccagcagggattcaaggaccacaagggcttcgtggtgagacaggcccagcagga
gcgataggccctcaaggagtaaagggagacccaggaccaaaaggagagcaaggtcctgca
ggtaaagatggtgaacctggattacctgggttaccaggtaatccaggcctggcaggacca
aaaggtgcagatggcaaggatggtgaatcaggtttaccaggtccacaaggtttaccaggt
ccacaaggtttaccaggtccagcgggtctagcaggagctccaggcgctaaaggtccacaa
ggtcctccaggcccagcgggtccagcaggagctccagggccagagaaaattataaatgat
ttaacttctggggatacaacaagtgccttatcagctaaacagggtaaggttttaaatgac
gatataaaaagatcacgtctttttgtagaagggggtaatggtaatggtaatggtaatatt
ataacgtgttggtctggtaataaagatagatatgatgaaatagtttctaattctatagga
actagaaatatgtttttaggtatcaattcaggcaatgacggtaaatttagtacgactcat
aatgtagctattggggataatactttatctagtattagtaatggttctaatagcaatgta
gctataggctctcgtgtatttcaggcagctgcaagggtatctaatactgtagctattggg
catactgcagccgcttatgctaatcaattaaatcgctctatttttatagggcatggatca
gctcctaaagaaaacagtagttcttctaatgagatagttaagcatctactggagatgtac
ttaataaaggtaaaggtaataatacagtacttattgggaatgacaacactgaagtaa
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