Ichthyobacterium seriolicida: JBKA6_1304
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Entry
JBKA6_1304 CDS
T05228
Name
(GenBank) exodeoxyribonuclease III
KO
K01142
exodeoxyribonuclease III [EC:
3.1.11.2
]
Organism
ise
Ichthyobacterium seriolicida
Pathway
ise03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
ise00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
JBKA6_1304
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ise03400
]
JBKA6_1304
Enzymes [BR:
ise01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
JBKA6_1304
DNA repair and recombination proteins [BR:
ise03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
JBKA6_1304
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Exo_endo_phos
Exo_endo_phos_2
Motif
Other DBs
NCBI-ProteinID:
BAV95317
UniProt:
A0A1J1E2Y7
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All DBs
Position
1695763..1696524
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AA seq
253 aa
AA seq
DB search
MKIISYNLNGIRSAINKGLYQWIESVNADIICMQEIRIDELQLDLDFFKKLNYNSYWFSA
EKKGYSGVGILSKKKALHIEKGIGINDVDREGRVIRIDLEELSIMSVYVPSATNMDRLEF
KMNFLDHFQKHVDDIKKTHPNLLVCGDYNICHKAIDIHNPIANKNTSGFLPEERMWLDQF
INSGFVDSFRHFVKEPHNYTWWSYRANSRNNNKGWRIDYHLVSDVLAKKMSRAYILSDVK
HSDHCPVVVEFDF
NT seq
762 nt
NT seq
+upstream
nt +downstream
nt
atgaagataatatcttataatttaaacggcatacgttcagctataaataagggattatat
caatggatagaatctgtaaatgctgatattatctgtatgcaggagataaggatcgatgag
cttcaattagacttagattttttcaaaaagttgaattacaattcttattggttctctgca
gagaagaaaggttatagtggtgtaggtattttgagtaaaaaaaaagctctgcatatagaa
aaaggaataggtattaatgatgtagatcgtgagggcagagttatccgtatagatttagaa
gagttatctataatgagtgtttacgttccatctgctacaaatatggatagattggaattt
aagatgaattttctagatcattttcaaaaacatgtggatgatataaaaaagacacatcct
aatctcttggtttgtggagattataatatatgtcataaagccatagatattcacaatcct
atagctaacaaaaacacttctggatttttgccagaggagaggatgtggttagatcaattt
ataaatagtggctttgtagattcctttcgtcattttgtaaaggagccacataattacact
tggtggagttatagagctaattctagaaacaataataagggatggaggatagattatcat
ttagtgagtgatgttctagctaaaaaaatgagtagagcctatatcttgagcgatgtaaaa
cactcagatcactgtcctgtggttgtagagtttgatttttaa
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