Ichthyobacterium seriolicida: JBKA6_1397
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Entry
JBKA6_1397 CDS
T05228
Name
(GenBank) UDP-n-acetylmuramoylalanyl-d-glutamyl-2,6-diaminopimelate/d-alanyl-d-alanyl ligase
KO
K01929
UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:
6.3.2.10
]
Organism
ise
Ichthyobacterium seriolicida
Pathway
ise00300
Lysine biosynthesis
ise00550
Peptidoglycan biosynthesis
ise01100
Metabolic pathways
ise01502
Vancomycin resistance
Brite
KEGG Orthology (KO) [BR:
ise00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
JBKA6_1397
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
JBKA6_1397
09160 Human Diseases
09175 Drug resistance: antimicrobial
01502 Vancomycin resistance
JBKA6_1397
Enzymes [BR:
ise01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.10 UDP-N-acetylmuramoyl-tripeptide---D-alanyl-D-alanine ligase
JBKA6_1397
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Gene cluster
GFIT
Motif
Pfam:
Mur_ligase_M
Mur_ligase_C
Mur_ligase
Motif
Other DBs
NCBI-ProteinID:
BAV95410
UniProt:
A0A1J1DZQ8
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Position
1825574..1826854
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AA seq
426 aa
AA seq
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MDISEIYKIIYKQNLRISTDTRSIEDNSVFVALKGENFDGNAFAKKALSKGAKLVFVDDK
KYSDLENVIYVPDTLKMIQELAVYHRDKFQIPFIAITGSNGKTTTKELVNSVLLEKYKTH
CTKGNLNNHIGVPLTILSIQTDTEMAIIEMGANHKGEIDFLCKISKPNYGYITNFGRAHL
EGFGNLEGVIEGKSELYNFLKNNSAKVFVNTADETQNTILSKKGIIDIIPFGPDSNTDIN
LENIDPFVSVNYLGKIIKSNLIGSYNFYNISAAIAIGEHFGLSFEQIKDGIQKYFPTNNR
SQVLKKEDLEIILDAYNANPSSMEIALSSLSNQSDVVLILGDMAELGSFSEEEHQKLVFL
IEQRNFHKTYLLGDQFFKTNITKPNIYKYRDIENLKSDLKNDYFSNKKIFIKGSRSMKLE
ELIHIF
NT seq
1281 nt
NT seq
+upstream
nt +downstream
nt
atggatatttcagagatttataagattatttacaaacaaaatctaagaataagtacagat
accagatctatagaagacaacagtgtatttgtagctttaaaaggagaaaatttcgatgga
aatgcctttgcaaagaaagcgttgagtaaaggagctaaactagtttttgtagatgacaaa
aaatattctgatttagaaaatgtaatatacgttcccgatactcttaaaatgatacaagag
ttagccgtttatcacagagataaattccagataccatttatagccataactggaagcaat
ggaaagactactaccaaagaattggtgaattctgttctattggaaaaatataaaactcac
tgtacaaaaggaaatttaaataatcacataggagtacctctcactattttatctatacaa
actgatacggaaatggccataatagaaatgggtgccaatcataaaggtgaaatagacttt
ttatgtaaaatatcaaagcccaattatggatatataacaaattttggaagagctcatctg
gagggatttggtaatttggaaggggttatagagggaaaatctgaactttataacttttta
aaaaacaacagcgcaaaagtttttgtaaacactgcagatgaaacacaaaatacaatatta
tctaaaaaaggaattatcgatatcataccttttggacctgattcgaatacagatataaat
ctcgaaaacatcgatccctttgtaagtgtcaattatttgggtaagattataaagtctaat
ctaataggcagctataatttttataatatatctgcagccatagctataggagagcatttt
ggattgagttttgagcagataaaagatggaatacaaaagtatttccctacaaataatcgt
tcacaagttttaaaaaaagaggatctagaaataattttggacgcatacaatgcaaatcct
tcgagtatggaaatagctttgagcagtttatcaaatcaaagtgatgtggttttaatatta
ggagatatggcagaattgggatccttttcagaagaagaacaccaaaaattggtttttctc
attgaacagcgaaattttcacaaaacttatctattaggtgatcaattctttaagacaaat
attacaaagcctaatatttataaatacagagatatagaaaatctaaaaagcgatttaaaa
aatgattatttctcaaacaaaaaaatattcataaagggatctagatccatgaaattagaa
gaactaatccatatattctag
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