KEGG   Ichthyobacterium seriolicida: JBKA6_1460
Entry
JBKA6_1460        CDS       T05228                                 
Name
(GenBank) DNA topoisomerase
  KO
K02621  topoisomerase IV subunit A [EC:5.6.2.2]
Organism
ise  Ichthyobacterium seriolicida
Brite
KEGG Orthology (KO) [BR:ise00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:ise03032]
    JBKA6_1460
   03036 Chromosome and associated proteins [BR:ise03036]
    JBKA6_1460
  09183 Protein families: signaling and cellular processes
   02048 Prokaryotic defense system [BR:ise02048]
    JBKA6_1460
Enzymes [BR:ise01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.2  DNA topoisomerase (ATP-hydrolysing)
     JBKA6_1460
DNA replication proteins [BR:ise03032]
 Prokaryotic type
  DNA Topoisomerases
   JBKA6_1460
Chromosome and associated proteins [BR:ise03036]
 Prokaryotic type
  Chromosome partitioning proteins
   Other chromosome partitioning proteins
    JBKA6_1460
Prokaryotic defense system [BR:ise02048]
 Toxin-antitoxin system (TA system)
  Type II TA system
   Type II TA system related factors
    JBKA6_1460
SSDB
Motif
Pfam: DNA_topoisoIV
Other DBs
NCBI-ProteinID: BAV95473
UniProt: A0A1J1DZY7
LinkDB
Position
complement(1897635..1899608)
AA seq 657 aa
MPDNTIDLSIKNDTSEVTEVSGMYRNWFLDYASYVILERAIPTIEDGLKPVQRRILHSLY
ELNDGRYNKVANIVGNTMKYHPHGDASIFEATVQLGQKNFLIDTQGNWGNILTGDKAAAA
RYIEARLSEFALDVVFNPKVTVWQKSYDGRNNEPITLPIKFPLLLAQGVEGIAVGLSTKI
MPHNFIELIDASIQNLKGIKTNIYPDFPTKGLADFTDYKDGLRGGKIKMRARISQVGKGI
LKITEIPYGMTTSSLIESIIKANDKGKVRIKKIEDNTAEDVEILIYLHNSAVEEKIIDAL
YAFTDCELSLSPISCVIENEKPVFLGVSEILYKSTENTKQLLYRELEIKLEDLREQWHFS
TLERIFIVRKIYRNIEEKDTWEDVISAIDKGLKPYVKQLIRDITKEDIVKLTEIRIKRIS
KFDIDKSETYIKNIEKQIKETEYNLKNIVDFTIQYFTRIKTKYKNVYKGRKTEIKTFDNI
DIFDVAISNTKLYFNKTEGFIGTSLKDESFALECSDIDDIIVFKKDGTFLVTKVDSKTFV
GKDIIHIQVFKKGNSQNVYNVIYEDGETGISYKKRFNVLSVTRDKEYDITQGTKGSKVIY
FSANPKSETEVVTVHLKKKYTLMKSKFEVDFSQLSIKGKNVKGNIVTKYSINKIKLK
NT seq 1974 nt   +upstreamnt  +downstreamnt
atgccagataacacaatagacctaagcattaaaaatgatacttcggaagtaaccgaagta
tcgggcatgtatagaaattggtttttagattacgcctcatatgttattttagaaagagct
attcccaccatagaagatggcttaaagcctgtacagcgacgtatattgcattcgttgtac
gagctaaacgatgggcgctataataaggttgcaaatatagtgggcaacactatgaaatat
catcctcatggagatgcttctatatttgaagctacagtgcagctgggtcaaaaaaacttt
ctaatagatacccagggaaactgggggaacatactcacaggagataaggcagcagcagct
aggtatatagaagccagattatctgaatttgccttagacgtggtttttaatcctaaggta
acagtatggcaaaaatcttatgacggcagaaataatgagccgattactttgcctatcaaa
ttcccattacttttagctcaaggagtcgaaggtattgccgttggcttgtccactaaaatc
atgcctcataattttatagagttaatagatgcttcaatacaaaatctcaaggggataaag
acaaatatatatcctgatttccccacaaaaggactggcagatttcacagattataaagat
ggattaagaggtgggaaaataaagatgagagccagaatatctcaagtaggcaaggggatt
ttaaaaataactgaaatcccttatgggatgacaacttcctcattgatagagtctataata
aaggcaaatgataaggggaaagtcagaataaaaaaaatagaggacaatacagctgaggat
gtagagatattaatatacttacataacagtgctgtagaagagaaaattatagatgctcta
tatgcttttacagattgtgaactatccttatctcctatttcttgtgtcatagaaaatgaa
aagcccgtttttttgggtgtttctgaaatactttataaatccacggaaaacaccaaacag
ctgctatatagagaattggaaattaagttggaagatttgagagaacaatggcatttttcg
accttggagaggatatttatagtcaggaaaatatatagaaatatagaagaaaaagacact
tgggaagatgttatctctgccatagataagggattaaaaccctatgtaaaacaattaatt
agagatataaccaaagaggatatagtaaaattaactgaaataagaattaaacgaatctct
aaatttgatattgataaatctgagacctacataaagaatatagaaaaacagataaaagaa
actgaatataacttaaaaaatattgtagactttacaatacagtacttcactaggattaaa
accaaatacaaaaatgtatataaagggcgcaaaactgagataaaaacatttgacaatata
gatatattcgatgtagctatttctaataccaaattatatttcaataaaacagaaggattt
ataggaacttctttaaaagatgaatcttttgctttggaatgctcagatatagatgatatt
atcgtgtttaaaaaggatggaacttttttagttaccaaagtagatagtaaaacctttgtg
ggcaaggatataatacatatacaagtatttaagaaaggaaatagccaaaatgtatacaat
gtcatatatgaagatggcgagacaggtatttcatataaaaaacgatttaatgtattgtct
gtaacacgagataaggaatacgatataacacaaggaactaaaggatctaaggtaatttac
ttttcagcaaatcctaagagtgaaacagaagttgtaactgtacatttgaaaaaaaaatac
actttgatgaaatcaaaatttgaagttgatttttcacaactgagtataaagggaaaaaat
gtaaaaggaaatatagtgaccaaatactcaataaataaaataaagctcaaataa

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