Ictidomys tridecemlineatus (thirteen-lined ground squirrel): 101954466
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Entry
101954466 CDS
T10664
Symbol
Mkrn1
Name
(RefSeq) E3 ubiquitin-protein ligase makorin-1
KO
K15687
E3 ubiquitin-protein ligase makorin [EC:
2.3.2.27
]
Organism
iti Ictidomys tridecemlineatus (thirteen-lined ground squirrel)
Brite
KEGG Orthology (KO) [BR:
iti00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
iti04121
]
101954466 (Mkrn1)
Enzymes [BR:
iti01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
101954466 (Mkrn1)
Ubiquitin system [BR:
iti04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
101954466 (Mkrn1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-CCCH_4
zf_CCCH_4
zf-CCCH
Torus
zf-CCCH_2
zf-CCCH_9
zf-CCCH_3
Motif
Other DBs
NCBI-GeneID:
101954466
NCBI-ProteinID:
XP_021586804
LinkDB
All DBs
Position
Unknown
AA seq
245 aa
AA seq
DB search
MQTRTQEPILGVIFRLQSADRQRLLYFMHGVCKEGDNCRYSHDLSDSPYGVVCKYFQRGY
CIYGDRCRYEHSKPLKQEEATATDLIAKPTLAASSSLSSVVGPLVEMNTGEAESRNSNYP
TVGAGSEDWVNAIEFVPGQPYCGRTAPSCTEAPLQGSVTKEESEKEQTAVETKKQLCPYA
AVGECRYGENCVYLHGDSCDMCGLQVLHPMDAAQRSQHIKVSLQGDACVFRCKKLYLPFH
NVSSF
NT seq
738 nt
NT seq
+upstream
nt +downstream
nt
atgcagacgcggacgcaagagcctattttaggtgttatattccggcttcaaagcgcggat
cggcagcgactgctgtattttatgcatggggtttgtaaggaaggagataactgtcgctac
tcgcatgacctctctgacagtccgtatggtgtagtgtgcaagtattttcaacgtgggtac
tgtatttatggagaccgctgcagatatgaacatagcaagccattgaaacaggaagaagcg
actgctacagatctaattgcaaaacctacccttgctgcttcctcaagtctctcatccgtg
gttggaccgcttgtcgaaatgaatacaggcgaagctgagtcaagaaattcaaactatcca
acagtaggagcaggttcagaggactgggtgaatgccattgagtttgttcctgggcagccc
tactgtggacgtactgccccttcctgcactgaagcacccctgcagggctcagtgaccaag
gaagaatcagagaaagagcaaactgcagtggaaactaagaagcagctttgcccctatgct
gcagtgggagagtgccgctatggggagaactgtgtgtatctccacggagactcgtgtgac
atgtgtgggctgcaagtcctccacccgatggatgcagcccagaggtcacagcacatcaaa
gtaagtcttcagggagacgcctgtgttttcaggtgtaagaagctgtatttgccctttcac
aatgtcagttcattttag
DBGET
integrated database retrieval system
