KEGG   Ictidomys tridecemlineatus (thirteen-lined ground squirrel): 101954537
Entry
101954537         CDS       T10664                                 
Symbol
Col4a3
Name
(RefSeq) collagen alpha-3(IV) chain isoform X1
  KO
K06237  collagen type IV alpha
Organism
iti  Ictidomys tridecemlineatus (thirteen-lined ground squirrel)
Pathway
iti04151  PI3K-Akt signaling pathway
iti04382  Cornified envelope formation
iti04510  Focal adhesion
iti04512  ECM-receptor interaction
iti04518  Integrin signaling
iti04820  Cytoskeleton in muscle cells
iti04926  Relaxin signaling pathway
iti04933  AGE-RAGE signaling pathway in diabetic complications
iti04974  Protein digestion and absorption
iti05146  Amoebiasis
iti05165  Human papillomavirus infection
iti05200  Pathways in cancer
iti05222  Small cell lung cancer
Brite
KEGG Orthology (KO) [BR:iti00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   04151 PI3K-Akt signaling pathway
    101954537 (Col4a3)
  09133 Signaling molecules and interaction
   04512 ECM-receptor interaction
    101954537 (Col4a3)
   04518 Integrin signaling
    101954537 (Col4a3)
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04510 Focal adhesion
    101954537 (Col4a3)
  09142 Cell motility
   04820 Cytoskeleton in muscle cells
    101954537 (Col4a3)
 09150 Organismal Systems
  09152 Endocrine system
   04926 Relaxin signaling pathway
    101954537 (Col4a3)
  09154 Digestive system
   04974 Protein digestion and absorption
    101954537 (Col4a3)
  09158 Development and regeneration
   04382 Cornified envelope formation
    101954537 (Col4a3)
 09160 Human Diseases
  09161 Cancer: overview
   05200 Pathways in cancer
    101954537 (Col4a3)
  09162 Cancer: specific types
   05222 Small cell lung cancer
    101954537 (Col4a3)
  09172 Infectious disease: viral
   05165 Human papillomavirus infection
    101954537 (Col4a3)
  09174 Infectious disease: parasitic
   05146 Amoebiasis
    101954537 (Col4a3)
  09167 Endocrine and metabolic disease
   04933 AGE-RAGE signaling pathway in diabetic complications
    101954537 (Col4a3)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:iti04147]
    101954537 (Col4a3)
   00536 Glycosaminoglycan binding proteins [BR:iti00536]
    101954537 (Col4a3)
Exosome [BR:iti04147]
 Exosomal proteins
  Exosomal proteins of other cancer cells
   101954537 (Col4a3)
Glycosaminoglycan binding proteins [BR:iti00536]
 Heparan sulfate / Heparin
  Extracellular matrix molecules
   101954537 (Col4a3)
SSDB
Motif
Pfam: Collagen C4
Other DBs
NCBI-GeneID: 101954537
NCBI-ProteinID: XP_013214570
LinkDB
Position
Unknown
AA seq 1670 aa
MRPGSLRRPPALLLRLLLVLLAAAPAASKGCVCKDKGQCFCEGAKGEKGEKGFPGPPGSP
GQKGFPGPEGLPGPQGPKGCPGRPGLTGPKGVRGITGLPGFSGPPGLPGLPGHPGPFGPT
GLPGCNGSKGERGFPGLPGTPGYPGVPGAAGPKGQKGAPAKGEDRKLNGRGDPGLPGPPG
SQGLPGPPGFPGPMGPPGPPGFLGFPGATGPAGPKGHMGDNMIGQKGEKGVKGLTGPPGP
PGTVIVTLTGPDNRTDLKGEKGDKGAMGESGPPGPPGPPGESYGSAKGAPGEPGPQGKPG
KGGTPGFPGTEGAKGNRGFPGLMGEDGIKGWKGDIGPPGFRGPTEYYDAYQEKGDEGIPG
PPGPKGARGPQGPSGPPGVPGSPGSSSPGLRGAPGWPGLKGIKGEQGPPGKNTVGLPGSP
GCPGSPGPAGPPGPPGPPGDTIFRKGPPGDRGLPGHLGPPGVPGVYGPKGESGLLCIECP
CIPGPPGLPGLPGLDGVKGIPGGRGATGVKGSPGSPGSAGLPGFPGFPGAEGDPGLKGGK
GETFPPQGPVGAPGDPGLRGHPGKKGLDGIPGTPGAKGLPGPRGEPALSGVKGDQGPPGD
PGPPGSPGSAGPAGPPGYGPPGEPGPKGTQGIPGAPGPPGEAGPKGESTVSTPVPGLPGP
PGRPGHAGPPGPPGLPGSMGKCNPGLPGPDGEPGIPGTGFPGPPGPKGDPGFQGTKGSPG
CPGKMGEPGLPGQPGFPGAKGEPALARPGEPGKPGFPGERGNSGENGEIGLPGLPGLPGI
PGKEGLDGPRGDPGHPGPPGDKGPPGRCLEGPRGAQGLPGLNGLQGQPGRRGVTGPKGDP
GIPGLDRSGFPGEPGPPGKPGHRGEMGPPGHKGYPGTPGFSGPPGGRGMVGLMGHPGATG
PPGPPGNPGMQGQKGSLGIPGIKGERGPPGARGEQGDKGNPGPSQIVHLKGDKGEPGPKG
FAGYPGEKGNRGIPGFPGLKGHEGPPGPPGPPGPQGDPGSPGNPGDPGPRGAPGSMGNMG
VPGSKGKRGTSGLPGLAGRPGFPGTHGRQGDKGEPGYSKDTRPGPPGPKGDPGLPGDVGK
KGERGAPGPPGRSGPAGPEGAPGSPGDPGHPGKPGPDGDLGLKGIKGFPGRPGIKGPPGL
PGFPGPPGPMGVRGNQGHDGIPGPAGEKGETGLLGAHPGPRGNPGAPGAKGDRGAPGWPG
LPGRKGTMGDVGPRGPMGIAGPPGPPGQPGTIIPGQKGNRGPPGSRGYPGDPGSPGPPGS
HVKCIKGDKGFMGQPGPRGPPGSIGDIGPPGHPGTPGTPGLPGLRGDPGFYGFPGIKGEK
GDPGFRGSIGPPGPIGPKGPPGVRGDPGTLKIISLPGSPGPPGPPGPPGMQGEPGPVGSP
GNLGPCGPRGKPGKDGKPGIPGPAGEKGHKGHKGEQGPPGSDGLPGLKGKPGDIGLPAME
TRKRGFVFTRHSQATVIPACPEGTEPLYSGFSLLFVQGNEQAHGQDLGTLGSCLQRFTTM
PFLFCNVDEICNFASRNDYSYWLSTPALMPMDMAPITGRALESFISRCTVCEGPAMTIAV
HSQTTTIPPCPHGWVSLWKGFSFIMFTSAGSEGAGQALASPGSCLEEFRASPFIECHGRG
TCNYYSNSYSFWLASLNPERMFRKPIPSTVKAGELEKIISRCQVCMKKGH
NT seq 5013 nt   +upstreamnt  +downstreamnt
atgcgccccgggtccttacggaggccgccggcactcctgcttcgactcctgctggtgctc
ctggcggccgcgcccgcggcgagcaagggctgtgtctgtaaagacaaaggccagtgcttc
tgcgaaggggccaaaggggagaagggggagaaaggctttcctggaccccctggttctcct
ggccagaaaggattcccaggtcctgaaggcttgcctggaccacagggacccaagggttgt
ccaggacgtccaggactcactggtcccaaaggtgtaaggggaataactggattaccagga
ttttcaggccctcctggacttccaggcctcccgggccatcctgggccttttggacctact
ggtttaccaggatgcaatggctctaagggggaacgaggatttccaggacttccagggaca
ccaggctacccaggggtcccgggtgctgctggaccaaaaggacaaaagggtgctcctgct
aaaggagaagatagaaaactcaatggaagaggtgaccccgggctgccaggacctccagga
tcccagggtctgccaggccccccaggttttccgggacctatgggcccacctggccctcca
ggattccttggctttccaggagctacgggacctgcggggcctaagggtcacatgggtgat
aacatgataggacaaaaaggagaaaagggtgtgaaaggattaacaggcccccctggccca
ccaggaacagttattgtgacactaactggcccagacaacagaacggacctcaagggggag
aagggagacaagggagccatgggagaatctggacctcctggacccccgggaccacctgga
gaatcatatggatctgcaaaaggtgctcctggagaacctggcccacagggaaaacctgga
aaaggtggtacccctggcttccctggcactgagggagccaagggcaacaggggcttccct
gggttaatgggtgaagatggcattaagggatggaaaggggacatcggccccccaggattt
cgcggtccaacagaatattatgatgcataccaggaaaagggagatgaaggaatcccaggc
cctccaggacccaaaggagctcgtggcccacagggtcccagtggtccccctggagttcct
ggaagtcctggatcatcaagtcctggcctcagaggagcccccgggtggcctggcttgaaa
ggaatcaaaggggagcaaggacctccaggaaagaacaccgtgggcctgcctgggtcccct
ggctgtcctggctcaccaggccctgcagggccaccaggacctccaggacctccaggtgac
accatttttcgcaagggtccacctggcgatcgtggcctgccaggccatctagggcctccg
ggagtcccaggagtctatgggcccaaaggagaatcaggcctcctgtgcatagagtgcccc
tgtattccagggccccctggcctcccaggattgccagggttggatggtgtcaaaggaatc
ccaggaggacgaggtgctactggagtgaaaggaagccctgggtccccaggaagtgctggt
cttccaggatttccaggattcccaggtgctgagggagatcctggacttaaaggaggaaaa
ggtgaaacatttccgccccaggggccagtgggtgccccaggggatcccgggctcagaggg
catccagggaaaaagggcttggatggaattcctggaactccaggagctaaaggattacca
ggacctcgaggagaaccggccttgagtggtgtgaagggggaccagggtcctccaggggat
cctgggccccctgggtccccaggatctgcaggacctgctggaccacctggctatggaccc
ccgggagagccaggtccaaagggcacccaaggaattcctggagccccaggaccacctgga
gaagccggtcctaagggagaatccactgtctcaacaccagtcccaggcctcccaggaccc
ccagggcgccctggccatgctggtcccccaggtccacctggtctcccaggatccatgggg
aagtgtaatcccggtcttcctggacctgatggtgaaccaggaattccaggaactggattt
cctggacctcccggacctaagggagatccaggttttcaaggaacaaaaggatcaccaggt
tgtcctgggaaaatgggagagcccgggttaccgggacagccaggcttcccaggagccaag
ggagaaccagcactagccaggcctggagaaccgggaaaaccaggttttccaggagaaaga
ggcaattctggggaaaatggagaaattggactccctggacttccaggtctccctggaatt
ccaggaaaagaagggcttgatggaccacgaggagatccagggcatcctgggccacctgga
gataaaggacctccaggaaggtgcctagagggccccagaggagcccaaggacttccaggc
ttaaatggattgcaagggcaaccaggcagaagaggtgtgacagggccaaaaggggaccca
ggaattccaggcttggataggtcaggattccctggagaacctggaccaccaggaaagcca
ggtcatcgaggtgagatgggaccacctggtcacaaaggatatccaggaactccaggattt
tcaggaccaccaggtggaaggggcatggttgggttgatgggccatcctggagccactggc
cctcctgggcctcctgggaacccaggcatgcaggggcagaagggtagccttggaattcca
ggaataaagggtgagagaggacccccaggagccagaggggagcaaggagataaaggaaat
ccaggtccttctcaaatagtccatttaaagggagacaagggagaacccgggcccaaaggg
ttcgcaggatatccaggtgagaaaggaaacagaggtattccagggtttccaggtttaaaa
ggccatgaaggaccacctggaccaccgggaccaccagggcctcagggagatccaggaagc
cctgggaatcctggagatccaggaccacgtggtgcaccaggaagcatggggaacatgggt
gtgccaggttctaaaggaaaaagaggaacttcaggacttccaggtctagctggaagacca
ggcttcccaggtactcatggtcgacaaggagataagggagaaccaggttactcaaaagac
acaaggccaggaccaccaggaccaaagggggatccaggattgccaggtgacgtgggaaag
aaaggagaaagaggggcccctggcccacctggacgttcagggcctgctggacctgaggga
gcccctggaagtccaggagatcctggccacccaggaaagccaggtcctgatggtgatttg
ggacttaaaggaatcaaaggtttcccaggccgaccaggaataaaaggccctccaggtctt
ccaggattcccaggacctcctggaccaatgggtgtaagaggtaaccaaggacacgatggg
attcctggtccagctggagaaaaaggagaaacaggcttgctgggggcccatccaggccca
agagggaaccctggtgctccaggtgccaaaggagacaggggagcccctggttggccgggc
ctccctggcaggaagggaacaatgggagatgttgggcctcgaggacccatgggcatagca
ggacccccagggccaccaggtcagcctgggaccatcatccctggccaaaaaggaaatcga
ggtccaccaggttcaagaggatatccaggtgatccaggttcccctggacctccagggagt
catgtaaaatgcataaaaggtgacaaaggatttatgggccagcctggcccaaggggtcca
cctggatctataggtgatatagggccaccaggtcatccgggaacaccaggtaccccaggt
cttccagggctcagaggtgatcctgggttctatggatttccaggcataaaaggagaaaag
ggtgatccaggatttcggggatcaattggacctccagggccaattgggccaaaaggacca
cccggtgtccgtggagatcctggcacacttaagatcatctcccttccaggaagcccaggg
ccacctggaccacctggaccaccagggatgcaaggagaacctgggccagtgggatcacca
ggaaacctaggaccctgcggaccaagaggcaaacctggaaaggatggaaaaccaggaatt
cctggaccagctggagaaaaaggccacaaaggccacaaaggagagcaaggaccgcctgga
tcagatgggttaccaggtttgaagggaaaacctggagatattggcttgccagcaatggag
acaagaaagaggggctttgtcttcacccgtcacagtcaagcaacagtgatccctgcatgt
ccagaagggacagagccactctacagtgggttttctcttctctttgtacaaggaaatgag
caagcccatggacaagaccttgggactcttgggagctgcctgcagcgatttaccaccatg
ccattcttattctgtaatgtcgacgaaatatgtaattttgcatctcggaatgattattca
tactggctgtcgacaccagctctgatgccaatggacatggctccaattactggcagagcc
ctggagagttttattagcagatgcaccgtctgtgaaggtcctgcgatgaccatagctgtt
cacagccaaaccaccaccatacccccatgtccccatggctgggtttccctctggaaagga
ttttcttttatcatgttcacaagcgcaggttctgagggcgctgggcaagcgctggcatcc
cctggctcctgcttggaggaattccgagccagtccatttatagaatgtcatggaagagga
acgtgcaactactattcaaattcctacagtttctggttggcttcgttaaacccagaaaga
atgttcagaaaacctattccatcaactgtgaaagctggggagttagaaaaaataataagt
cgctgtcaggtgtgcatgaagaaaggacactga

DBGET integrated database retrieval system